data_7F43 # _model_server_result.job_id g6heoDlfSnj5c2B5aaz93A _model_server_result.datetime_utc '2024-11-08 14:36:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7f43 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":701}' # _entry.id 7F43 # _exptl.entry_id 7F43 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 320.388 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-{4-[(3S)-piperidin-3-yl]phenyl}-2H-indazole-7-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7F43 _cell.length_a 45.515 _cell.length_b 68.726 _cell.length_c 160.631 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7F43 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H20 N4 O' _chem_comp.formula_weight 320.388 _chem_comp.id 3JD _chem_comp.mon_nstd_flag . _chem_comp.name 2-{4-[(3S)-piperidin-3-yl]phenyl}-2H-indazole-7-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Niraparib # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAC CAI 3JD doub 1 n y CAC CAD 3JD sing 2 n y CAI CAU 3JD sing 3 n y CAD CAT 3JD doub 4 n y CAU CAJ 3JD doub 5 n y CAU CAV 3JD sing 6 n y CAJ NAX 3JD sing 7 n y CAT CAV 3JD sing 8 n y CAT CAQ 3JD sing 9 n n CAV NAO 3JD doub 10 n y OAB CAQ 3JD doub 11 n n NAX NAO 3JD sing 12 n y NAX CAS 3JD sing 13 n n CAQ NAA 3JD sing 14 n n CAH CAS 3JD doub 15 n y CAH CAF 3JD sing 16 n y CAS CAG 3JD sing 17 n y CAF CAR 3JD doub 18 n y CAG CAE 3JD doub 19 n y CAR CAE 3JD sing 20 n y CAR CAW 3JD sing 21 n n CAW CAM 3JD sing 22 n n CAW CAN 3JD sing 23 n n CAM CAK 3JD sing 24 n n CAN NAP 3JD sing 25 n n NAP CAL 3JD sing 26 n n CAK CAL 3JD sing 27 n n CAM H1 3JD sing 28 n n CAM H2 3JD sing 29 n n CAK H3 3JD sing 30 n n CAK H4 3JD sing 31 n n CAL H5 3JD sing 32 n n CAL H6 3JD sing 33 n n NAP H7 3JD sing 34 n n CAN H9 3JD sing 35 n n CAN H10 3JD sing 36 n n CAW H11 3JD sing 37 n n CAF H12 3JD sing 38 n n CAH H13 3JD sing 39 n n CAE H14 3JD sing 40 n n CAG H15 3JD sing 41 n n CAJ H16 3JD sing 42 n n CAI H17 3JD sing 43 n n CAC H18 3JD sing 44 n n CAD H19 3JD sing 45 n n NAA H20 3JD sing 46 n n NAA H21 3JD sing 47 n n # _atom_sites.entry_id 7F43 _atom_sites.fract_transf_matrix[1][1] 0.021971 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014551 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006225 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 3JD B 1 701 1 3JD 3JD . D 3 HOH A 1 701 116 HOH HOH . D 3 HOH A 2 702 12 HOH HOH . D 3 HOH A 3 703 237 HOH HOH . D 3 HOH A 4 704 199 HOH HOH . D 3 HOH A 5 705 173 HOH HOH . D 3 HOH A 6 706 23 HOH HOH . D 3 HOH A 7 707 49 HOH HOH . D 3 HOH A 8 708 153 HOH HOH . D 3 HOH A 9 709 101 HOH HOH . D 3 HOH A 10 710 142 HOH HOH . D 3 HOH A 11 711 190 HOH HOH . D 3 HOH A 12 712 166 HOH HOH . D 3 HOH A 13 713 233 HOH HOH . D 3 HOH A 14 714 155 HOH HOH . D 3 HOH A 15 715 69 HOH HOH . D 3 HOH A 16 716 2 HOH HOH . D 3 HOH A 17 717 164 HOH HOH . D 3 HOH A 18 718 180 HOH HOH . D 3 HOH A 19 719 1 HOH HOH . D 3 HOH A 20 720 29 HOH HOH . D 3 HOH A 21 721 5 HOH HOH . D 3 HOH A 22 722 176 HOH HOH . D 3 HOH A 23 723 28 HOH HOH . D 3 HOH A 24 724 44 HOH HOH . D 3 HOH A 25 725 232 HOH HOH . D 3 HOH A 26 726 90 HOH HOH . D 3 HOH A 27 727 11 HOH HOH . D 3 HOH A 28 728 6 HOH HOH . D 3 HOH A 29 729 84 HOH HOH . D 3 HOH A 30 730 216 HOH HOH . D 3 HOH A 31 731 52 HOH HOH . D 3 HOH A 32 732 76 HOH HOH . D 3 HOH A 33 733 99 HOH HOH . D 3 HOH A 34 734 20 HOH HOH . D 3 HOH A 35 735 10 HOH HOH . D 3 HOH A 36 736 228 HOH HOH . D 3 HOH A 37 737 121 HOH HOH . D 3 HOH A 38 738 75 HOH HOH . D 3 HOH A 39 739 201 HOH HOH . D 3 HOH A 40 740 14 HOH HOH . D 3 HOH A 41 741 45 HOH HOH . D 3 HOH A 42 742 97 HOH HOH . D 3 HOH A 43 743 107 HOH HOH . D 3 HOH A 44 744 147 HOH HOH . D 3 HOH A 45 745 7 HOH HOH . D 3 HOH A 46 746 24 HOH HOH . D 3 HOH A 47 747 106 HOH HOH . D 3 HOH A 48 748 25 HOH HOH . D 3 HOH A 49 749 93 HOH HOH . D 3 HOH A 50 750 163 HOH HOH . D 3 HOH A 51 751 3 HOH HOH . D 3 HOH A 52 752 68 HOH HOH . D 3 HOH A 53 753 36 HOH HOH . D 3 HOH A 54 754 27 HOH HOH . D 3 HOH A 55 755 17 HOH HOH . D 3 HOH A 56 756 31 HOH HOH . D 3 HOH A 57 757 174 HOH HOH . D 3 HOH A 58 758 182 HOH HOH . D 3 HOH A 59 759 132 HOH HOH . D 3 HOH A 60 760 123 HOH HOH . D 3 HOH A 61 761 65 HOH HOH . D 3 HOH A 62 762 157 HOH HOH . D 3 HOH A 63 763 127 HOH HOH . D 3 HOH A 64 764 196 HOH HOH . D 3 HOH A 65 765 38 HOH HOH . D 3 HOH A 66 766 42 HOH HOH . D 3 HOH A 67 767 18 HOH HOH . D 3 HOH A 68 768 114 HOH HOH . D 3 HOH A 69 769 144 HOH HOH . D 3 HOH A 70 770 195 HOH HOH . D 3 HOH A 71 771 197 HOH HOH . D 3 HOH A 72 772 104 HOH HOH . D 3 HOH A 73 773 140 HOH HOH . D 3 HOH A 74 774 204 HOH HOH . D 3 HOH A 75 775 74 HOH HOH . D 3 HOH A 76 776 48 HOH HOH . D 3 HOH A 77 777 32 HOH HOH . D 3 HOH A 78 778 26 HOH HOH . D 3 HOH A 79 779 98 HOH HOH . D 3 HOH A 80 780 223 HOH HOH . D 3 HOH A 81 781 77 HOH HOH . D 3 HOH A 82 782 251 HOH HOH . D 3 HOH A 83 783 219 HOH HOH . D 3 HOH A 84 784 134 HOH HOH . D 3 HOH A 85 785 94 HOH HOH . D 3 HOH A 86 786 33 HOH HOH . D 3 HOH A 87 787 9 HOH HOH . D 3 HOH A 88 788 102 HOH HOH . D 3 HOH A 89 789 34 HOH HOH . D 3 HOH A 90 790 55 HOH HOH . D 3 HOH A 91 791 234 HOH HOH . D 3 HOH A 92 792 71 HOH HOH . D 3 HOH A 93 793 165 HOH HOH . D 3 HOH A 94 794 56 HOH HOH . D 3 HOH A 95 795 91 HOH HOH . D 3 HOH A 96 796 179 HOH HOH . D 3 HOH A 97 797 133 HOH HOH . D 3 HOH A 98 798 103 HOH HOH . D 3 HOH A 99 799 236 HOH HOH . D 3 HOH A 100 800 229 HOH HOH . D 3 HOH A 101 801 35 HOH HOH . D 3 HOH A 102 802 185 HOH HOH . D 3 HOH A 103 803 78 HOH HOH . D 3 HOH A 104 804 248 HOH HOH . D 3 HOH A 105 805 158 HOH HOH . D 3 HOH A 106 806 188 HOH HOH . D 3 HOH A 107 807 86 HOH HOH . D 3 HOH A 108 808 143 HOH HOH . D 3 HOH A 109 809 54 HOH HOH . D 3 HOH A 110 810 21 HOH HOH . D 3 HOH A 111 811 246 HOH HOH . D 3 HOH A 112 812 105 HOH HOH . D 3 HOH A 113 813 242 HOH HOH . D 3 HOH A 114 814 241 HOH HOH . D 3 HOH A 115 815 41 HOH HOH . D 3 HOH A 116 816 53 HOH HOH . D 3 HOH A 117 817 159 HOH HOH . D 3 HOH A 118 818 89 HOH HOH . D 3 HOH A 119 819 124 HOH HOH . D 3 HOH A 120 820 222 HOH HOH . D 3 HOH A 121 821 214 HOH HOH . D 3 HOH A 122 822 154 HOH HOH . D 3 HOH A 123 823 136 HOH HOH . D 3 HOH A 124 824 238 HOH HOH . D 3 HOH A 125 825 206 HOH HOH . D 3 HOH A 126 826 139 HOH HOH . D 3 HOH A 127 827 181 HOH HOH . D 3 HOH A 128 828 51 HOH HOH . D 3 HOH A 129 829 100 HOH HOH . D 3 HOH A 130 830 122 HOH HOH . D 3 HOH A 131 831 235 HOH HOH . D 3 HOH A 132 832 215 HOH HOH . D 3 HOH A 133 833 193 HOH HOH . D 3 HOH A 134 834 189 HOH HOH . D 3 HOH A 135 835 187 HOH HOH . D 3 HOH A 136 836 131 HOH HOH . D 3 HOH A 137 837 218 HOH HOH . D 3 HOH A 138 838 170 HOH HOH . D 3 HOH A 139 839 250 HOH HOH . D 3 HOH A 140 840 208 HOH HOH . D 3 HOH A 141 841 73 HOH HOH . D 3 HOH A 142 842 149 HOH HOH . D 3 HOH A 143 843 244 HOH HOH . D 3 HOH A 144 844 213 HOH HOH . D 3 HOH A 145 845 230 HOH HOH . D 3 HOH A 146 846 183 HOH HOH . D 3 HOH A 147 847 119 HOH HOH . D 3 HOH A 148 848 194 HOH HOH . D 3 HOH A 149 849 178 HOH HOH . E 3 HOH B 1 801 203 HOH HOH . E 3 HOH B 2 802 226 HOH HOH . E 3 HOH B 3 803 186 HOH HOH . E 3 HOH B 4 804 126 HOH HOH . E 3 HOH B 5 805 30 HOH HOH . E 3 HOH B 6 806 146 HOH HOH . E 3 HOH B 7 807 169 HOH HOH . E 3 HOH B 8 808 15 HOH HOH . E 3 HOH B 9 809 59 HOH HOH . E 3 HOH B 10 810 62 HOH HOH . E 3 HOH B 11 811 85 HOH HOH . E 3 HOH B 12 812 171 HOH HOH . E 3 HOH B 13 813 239 HOH HOH . E 3 HOH B 14 814 113 HOH HOH . E 3 HOH B 15 815 22 HOH HOH . E 3 HOH B 16 816 8 HOH HOH . E 3 HOH B 17 817 141 HOH HOH . E 3 HOH B 18 818 168 HOH HOH . E 3 HOH B 19 819 60 HOH HOH . E 3 HOH B 20 820 70 HOH HOH . E 3 HOH B 21 821 200 HOH HOH . E 3 HOH B 22 822 162 HOH HOH . E 3 HOH B 23 823 118 HOH HOH . E 3 HOH B 24 824 43 HOH HOH . E 3 HOH B 25 825 109 HOH HOH . E 3 HOH B 26 826 115 HOH HOH . E 3 HOH B 27 827 47 HOH HOH . E 3 HOH B 28 828 79 HOH HOH . E 3 HOH B 29 829 19 HOH HOH . E 3 HOH B 30 830 151 HOH HOH . E 3 HOH B 31 831 4 HOH HOH . E 3 HOH B 32 832 80 HOH HOH . E 3 HOH B 33 833 130 HOH HOH . E 3 HOH B 34 834 175 HOH HOH . E 3 HOH B 35 835 243 HOH HOH . E 3 HOH B 36 836 191 HOH HOH . E 3 HOH B 37 837 240 HOH HOH . E 3 HOH B 38 838 247 HOH HOH . E 3 HOH B 39 839 177 HOH HOH . E 3 HOH B 40 840 58 HOH HOH . E 3 HOH B 41 841 13 HOH HOH . E 3 HOH B 42 842 245 HOH HOH . E 3 HOH B 43 843 125 HOH HOH . E 3 HOH B 44 844 135 HOH HOH . E 3 HOH B 45 845 92 HOH HOH . E 3 HOH B 46 846 160 HOH HOH . E 3 HOH B 47 847 224 HOH HOH . E 3 HOH B 48 848 16 HOH HOH . E 3 HOH B 49 849 37 HOH HOH . E 3 HOH B 50 850 95 HOH HOH . E 3 HOH B 51 851 129 HOH HOH . E 3 HOH B 52 852 81 HOH HOH . E 3 HOH B 53 853 128 HOH HOH . E 3 HOH B 54 854 207 HOH HOH . E 3 HOH B 55 855 202 HOH HOH . E 3 HOH B 56 856 231 HOH HOH . E 3 HOH B 57 857 108 HOH HOH . E 3 HOH B 58 858 138 HOH HOH . E 3 HOH B 59 859 66 HOH HOH . E 3 HOH B 60 860 57 HOH HOH . E 3 HOH B 61 861 63 HOH HOH . E 3 HOH B 62 862 152 HOH HOH . E 3 HOH B 63 863 50 HOH HOH . E 3 HOH B 64 864 161 HOH HOH . E 3 HOH B 65 865 88 HOH HOH . E 3 HOH B 66 866 150 HOH HOH . E 3 HOH B 67 867 96 HOH HOH . E 3 HOH B 68 868 39 HOH HOH . E 3 HOH B 69 869 227 HOH HOH . E 3 HOH B 70 870 167 HOH HOH . E 3 HOH B 71 871 82 HOH HOH . E 3 HOH B 72 872 46 HOH HOH . E 3 HOH B 73 873 137 HOH HOH . E 3 HOH B 74 874 198 HOH HOH . E 3 HOH B 75 875 117 HOH HOH . E 3 HOH B 76 876 172 HOH HOH . E 3 HOH B 77 877 64 HOH HOH . E 3 HOH B 78 878 156 HOH HOH . E 3 HOH B 79 879 145 HOH HOH . E 3 HOH B 80 880 67 HOH HOH . E 3 HOH B 81 881 221 HOH HOH . E 3 HOH B 82 882 61 HOH HOH . E 3 HOH B 83 883 83 HOH HOH . E 3 HOH B 84 884 217 HOH HOH . E 3 HOH B 85 885 110 HOH HOH . E 3 HOH B 86 886 192 HOH HOH . E 3 HOH B 87 887 184 HOH HOH . E 3 HOH B 88 888 212 HOH HOH . E 3 HOH B 89 889 72 HOH HOH . E 3 HOH B 90 890 120 HOH HOH . E 3 HOH B 91 891 148 HOH HOH . E 3 HOH B 92 892 40 HOH HOH . E 3 HOH B 93 893 209 HOH HOH . E 3 HOH B 94 894 111 HOH HOH . E 3 HOH B 95 895 210 HOH HOH . E 3 HOH B 96 896 87 HOH HOH . E 3 HOH B 97 897 211 HOH HOH . E 3 HOH B 98 898 205 HOH HOH . E 3 HOH B 99 899 249 HOH HOH . E 3 HOH B 100 900 220 HOH HOH . E 3 HOH B 101 901 225 HOH HOH . E 3 HOH B 102 902 112 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAM 3JD . . . C 2 -10.152 16.628 -17.934 1 46.29 ? CAM 3JD 701 B 1 HETATM 2 C CAK 3JD . . . C 2 -9.333 16.335 -19.137 1 46.98 ? CAK 3JD 701 B 1 HETATM 3 C CAL 3JD . . . C 2 -10.182 15.797 -20.305 1 45.03 ? CAL 3JD 701 B 1 HETATM 4 N NAP 3JD . . . C 2 -11.082 14.67 -19.92 1 41.6 ? NAP 3JD 701 B 1 HETATM 5 C CAN 3JD . . . C 2 -11.815 14.98 -18.671 1 42.72 ? CAN 3JD 701 B 1 HETATM 6 C CAW 3JD . . . C 2 -10.823 15.36 -17.562 1 41.7 ? CAW 3JD 701 B 1 HETATM 7 C CAR 3JD . . . C 2 -11.512 15.367 -16.153 1 36.48 ? CAR 3JD 701 B 1 HETATM 8 C CAF 3JD . . . C 2 -12.82 15.791 -15.975 1 36.82 ? CAF 3JD 701 B 1 HETATM 9 C CAH 3JD . . . C 2 -13.389 15.746 -14.705 1 34.61 ? CAH 3JD 701 B 1 HETATM 10 C CAE 3JD . . . C 2 -10.789 14.895 -15.069 1 35.75 ? CAE 3JD 701 B 1 HETATM 11 C CAG 3JD . . . C 2 -11.347 14.859 -13.803 1 33.98 ? CAG 3JD 701 B 1 HETATM 12 C CAS 3JD . . . C 2 -12.646 15.3 -13.619 1 33.45 ? CAS 3JD 701 B 1 HETATM 13 N NAX 3JD . . . C 2 -13.242 15.213 -12.299 1 29.62 ? NAX 3JD 701 B 1 HETATM 14 C CAJ 3JD . . . C 2 -12.615 15.005 -11.148 1 30.21 ? CAJ 3JD 701 B 1 HETATM 15 N NAO 3JD . . . C 2 -14.55 15.249 -12.122 1 31.33 ? NAO 3JD 701 B 1 HETATM 16 C CAV 3JD . . . C 2 -14.838 15.094 -10.812 1 29.14 ? CAV 3JD 701 B 1 HETATM 17 C CAU 3JD . . . C 2 -13.644 14.935 -10.116 1 28.87 ? CAU 3JD 701 B 1 HETATM 18 C CAI 3JD . . . C 2 -13.686 14.761 -8.713 1 30.33 ? CAI 3JD 701 B 1 HETATM 19 C CAC 3JD . . . C 2 -14.915 14.746 -8.034 1 32.95 ? CAC 3JD 701 B 1 HETATM 20 C CAD 3JD . . . C 2 -16.123 14.913 -8.742 1 29.62 ? CAD 3JD 701 B 1 HETATM 21 C CAT 3JD . . . C 2 -16.074 15.085 -10.124 1 26.27 ? CAT 3JD 701 B 1 HETATM 22 C CAQ 3JD . . . C 2 -17.344 15.282 -10.909 1 25.1 ? CAQ 3JD 701 B 1 HETATM 23 O OAB 3JD . . . C 2 -17.313 15.563 -12.066 1 27.46 ? OAB 3JD 701 B 1 HETATM 24 N NAA 3JD . . . C 2 -18.583 15.123 -10.196 1 20.86 ? NAA 3JD 701 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 342 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 24 #