data_7F6M
#
_model_server_result.job_id            fMK5gp3Gm90RCg6jxE-m3A 
_model_server_result.datetime_utc      '2024-12-26 13:54:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7f6m 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":802}' 
#
_entry.id    7F6M 
#
_exptl.entry_id    7F6M 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          94.69 
_cell.angle_gamma         90 
_cell.entry_id            7F6M 
_cell.length_a            87.751 
_cell.length_b            82.337 
_cell.length_c            49.743 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7F6M 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 I N N 
? 3 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B C1 ANN 1 B ANN 0 1_555 B N ALA 2 B ALA 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? 
covale ? covale2 B C GLU 8 B GLU 7 1_555 B N NH2 9 B NH2 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.42 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 148 n n 
C1 C2 GOL sing 149 n n 
C1 H11 GOL sing 150 n n 
C1 H12 GOL sing 151 n n 
O1 HO1 GOL sing 152 n n 
C2 O2 GOL sing 153 n n 
C2 C3 GOL sing 154 n n 
C2 H2 GOL sing 155 n n 
O2 HO2 GOL sing 156 n n 
C3 O3 GOL sing 157 n n 
C3 H31 GOL sing 158 n n 
C3 H32 GOL sing 159 n n 
O3 HO3 GOL sing 160 n n 
#
_atom_sites.entry_id                     7F6M 
_atom_sites.fract_transf_matrix[1][1]    0.011396 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000936 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012145 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.020171 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 GOL A 1 801 1 GOL GOL . 
D 3 GOL A 1 802 2 GOL GOL . 
E 3 GOL A 1 803 5 GOL GOL . 
F 4 SO4 A 1 804 1 SO4 SO4 . 
G 4 SO4 A 1 805 2 SO4 SO4 . 
H 5 PEG A 1 806 1 PEG PEG . 
I 3 GOL B 1 101 3 GOL GOL . 
J 3 GOL B 1 102 4 GOL GOL . 
K 5 PEG B 1 103 2 PEG PEG . 
L 6 HOH A 1 901 23 HOH HOH . 
L 6 HOH A 2 902 22 HOH HOH . 
L 6 HOH A 3 903 31 HOH HOH . 
L 6 HOH A 4 904 20 HOH HOH . 
L 6 HOH A 5 905 111 HOH HOH . 
L 6 HOH A 6 906 21 HOH HOH . 
L 6 HOH A 7 907 91 HOH HOH . 
L 6 HOH A 8 908 3 HOH HOH . 
L 6 HOH A 9 909 65 HOH HOH . 
L 6 HOH A 10 910 44 HOH HOH . 
L 6 HOH A 11 911 66 HOH HOH . 
L 6 HOH A 12 912 7 HOH HOH . 
L 6 HOH A 13 913 84 HOH HOH . 
L 6 HOH A 14 914 70 HOH HOH . 
L 6 HOH A 15 915 90 HOH HOH . 
L 6 HOH A 16 916 49 HOH HOH . 
L 6 HOH A 17 917 19 HOH HOH . 
L 6 HOH A 18 918 82 HOH HOH . 
L 6 HOH A 19 919 99 HOH HOH . 
L 6 HOH A 20 920 8 HOH HOH . 
L 6 HOH A 21 921 76 HOH HOH . 
L 6 HOH A 22 922 88 HOH HOH . 
L 6 HOH A 23 923 9 HOH HOH . 
L 6 HOH A 24 924 100 HOH HOH . 
L 6 HOH A 25 925 16 HOH HOH . 
L 6 HOH A 26 926 12 HOH HOH . 
L 6 HOH A 27 927 25 HOH HOH . 
L 6 HOH A 28 928 69 HOH HOH . 
L 6 HOH A 29 929 92 HOH HOH . 
L 6 HOH A 30 930 87 HOH HOH . 
L 6 HOH A 31 931 30 HOH HOH . 
L 6 HOH A 32 932 78 HOH HOH . 
L 6 HOH A 33 933 52 HOH HOH . 
L 6 HOH A 34 934 29 HOH HOH . 
L 6 HOH A 35 935 39 HOH HOH . 
L 6 HOH A 36 936 38 HOH HOH . 
L 6 HOH A 37 937 53 HOH HOH . 
L 6 HOH A 38 938 113 HOH HOH . 
L 6 HOH A 39 939 59 HOH HOH . 
L 6 HOH A 40 940 57 HOH HOH . 
L 6 HOH A 41 941 43 HOH HOH . 
L 6 HOH A 42 942 97 HOH HOH . 
L 6 HOH A 43 943 107 HOH HOH . 
L 6 HOH A 44 944 106 HOH HOH . 
L 6 HOH A 45 945 93 HOH HOH . 
L 6 HOH A 46 946 98 HOH HOH . 
L 6 HOH A 47 947 115 HOH HOH . 
L 6 HOH A 48 948 104 HOH HOH . 
L 6 HOH A 49 949 109 HOH HOH . 
L 6 HOH A 50 950 96 HOH HOH . 
L 6 HOH A 51 951 51 HOH HOH . 
L 6 HOH A 52 952 26 HOH HOH . 
L 6 HOH A 53 953 71 HOH HOH . 
L 6 HOH A 54 954 45 HOH HOH . 
L 6 HOH A 55 955 42 HOH HOH . 
L 6 HOH A 56 956 34 HOH HOH . 
L 6 HOH A 57 957 13 HOH HOH . 
L 6 HOH A 58 958 33 HOH HOH . 
L 6 HOH A 59 959 74 HOH HOH . 
L 6 HOH A 60 960 72 HOH HOH . 
L 6 HOH A 61 961 73 HOH HOH . 
L 6 HOH A 62 962 62 HOH HOH . 
L 6 HOH A 63 963 86 HOH HOH . 
L 6 HOH A 64 964 48 HOH HOH . 
L 6 HOH A 65 965 64 HOH HOH . 
L 6 HOH A 66 966 77 HOH HOH . 
L 6 HOH A 67 967 105 HOH HOH . 
L 6 HOH A 68 968 58 HOH HOH . 
L 6 HOH A 69 969 103 HOH HOH . 
L 6 HOH A 70 970 61 HOH HOH . 
L 6 HOH A 71 971 83 HOH HOH . 
L 6 HOH A 72 972 4 HOH HOH . 
L 6 HOH A 73 973 67 HOH HOH . 
L 6 HOH A 74 974 54 HOH HOH . 
L 6 HOH A 75 975 32 HOH HOH . 
L 6 HOH A 76 976 102 HOH HOH . 
L 6 HOH A 77 977 56 HOH HOH . 
L 6 HOH A 78 978 79 HOH HOH . 
L 6 HOH A 79 979 81 HOH HOH . 
L 6 HOH A 80 980 75 HOH HOH . 
L 6 HOH A 81 981 47 HOH HOH . 
L 6 HOH A 82 982 95 HOH HOH . 
L 6 HOH A 83 983 24 HOH HOH . 
L 6 HOH A 84 984 112 HOH HOH . 
L 6 HOH A 85 985 110 HOH HOH . 
L 6 HOH A 86 986 68 HOH HOH . 
L 6 HOH A 87 987 41 HOH HOH . 
L 6 HOH A 88 988 27 HOH HOH . 
L 6 HOH A 89 989 85 HOH HOH . 
L 6 HOH A 90 990 80 HOH HOH . 
L 6 HOH A 91 991 108 HOH HOH . 
L 6 HOH A 92 992 114 HOH HOH . 
M 6 HOH B 1 201 46 HOH HOH . 
M 6 HOH B 2 202 63 HOH HOH . 
M 6 HOH B 3 203 1 HOH HOH . 
M 6 HOH B 4 204 2 HOH HOH . 
M 6 HOH B 5 205 35 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 3 109.285 114.303 39.093 1 59.37 ? C1 GOL 802 A 1 
HETATM 2 O O1 GOL . . . D 3 108.096 114.753 38.442 1 58.88 ? O1 GOL 802 A 1 
HETATM 3 C C2 GOL . . . D 3 109.284 112.798 39.362 1 59.78 ? C2 GOL 802 A 1 
HETATM 4 O O2 GOL . . . D 3 109.034 112.592 40.758 1 61.01 ? O2 GOL 802 A 1 
HETATM 5 C C3 GOL . . . D 3 108.259 112.016 38.531 1 60.07 ? C3 GOL 802 A 1 
HETATM 6 O O3 GOL . . . D 3 108.286 112.396 37.15 1 60.37 ? O3 GOL 802 A 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           34 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           340 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           6 
#