data_7F6O # _model_server_result.job_id WrE0CQ9y1-8vfAWpzeaSSw _model_server_result.datetime_utc '2025-01-10 13:44:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7f6o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":406}' # _entry.id 7F6O # _exptl.entry_id 7F6O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7F6O _cell.length_a 44.73 _cell.length_b 100.13 _cell.length_c 143.34 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7F6O _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,R 1 1 B,K,L,M,N,O,P,Q,S 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 G N N ? 6 H N N ? 6 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ALA 28 A ALA 26 1_555 C MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.651 ? metalc ? metalc2 A OD1 ASP 30 A ASP 28 1_555 C MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? metalc ? metalc3 C MN MN . A MN 401 1_555 D O5 CIT . A CIT 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.596 ? metalc ? metalc4 C MN MN . A MN 401 1_555 D O7 CIT . A CIT 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? metalc ? metalc5 C MN MN . A MN 401 1_555 D O1 CIT . A CIT 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.627 ? metalc ? metalc6 K MN MN . B MN 401 1_555 L O7 CIT . B CIT 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc7 K MN MN . B MN 401 1_555 L O5 CIT . B CIT 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.524 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 90 n n C1 C2 EDO sing 91 n n C1 H11 EDO sing 92 n n C1 H12 EDO sing 93 n n O1 HO1 EDO sing 94 n n C2 O2 EDO sing 95 n n C2 H21 EDO sing 96 n n C2 H22 EDO sing 97 n n O2 HO2 EDO sing 98 n n # _atom_sites.entry_id 7F6O _atom_sites.fract_transf_matrix[1][1] 0.022356 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009987 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006976 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MN A 1 401 1 MN MN . D 3 CIT A 1 402 3 CIT CIT . E 4 SO4 A 1 403 5 SO4 SO4 . F 5 SO3 A 1 404 7 SO3 SO3 . G 6 EDO A 1 405 10 EDO EDO . H 6 EDO A 1 406 12 EDO EDO . I 7 GOL A 1 407 13 GOL GOL . J 8 PG4 A 1 408 15 PG4 PG4 . K 2 MN B 1 401 2 MN MN . L 3 CIT B 1 402 4 CIT CIT . M 4 SO4 B 1 403 6 SO4 SO4 . N 5 SO3 B 1 404 8 SO3 SO3 . O 9 SO2 B 1 405 9 SO2 SO2 . P 6 EDO B 1 406 11 EDO EDO . Q 10 PEG B 1 407 14 PEG PEG . R 11 HOH A 1 501 150 HOH HOH . R 11 HOH A 2 502 12 HOH HOH . R 11 HOH A 3 503 100 HOH HOH . R 11 HOH A 4 504 64 HOH HOH . R 11 HOH A 5 505 6 HOH HOH . R 11 HOH A 6 506 41 HOH HOH . R 11 HOH A 7 507 1 HOH HOH . R 11 HOH A 8 508 51 HOH HOH . R 11 HOH A 9 509 21 HOH HOH . R 11 HOH A 10 510 87 HOH HOH . R 11 HOH A 11 511 49 HOH HOH . R 11 HOH A 12 512 26 HOH HOH . R 11 HOH A 13 513 59 HOH HOH . R 11 HOH A 14 514 35 HOH HOH . R 11 HOH A 15 515 144 HOH HOH . R 11 HOH A 16 516 92 HOH HOH . R 11 HOH A 17 517 11 HOH HOH . R 11 HOH A 18 518 17 HOH HOH . R 11 HOH A 19 519 60 HOH HOH . R 11 HOH A 20 520 66 HOH HOH . R 11 HOH A 21 521 39 HOH HOH . R 11 HOH A 22 522 55 HOH HOH . R 11 HOH A 23 523 62 HOH HOH . R 11 HOH A 24 524 81 HOH HOH . R 11 HOH A 25 525 159 HOH HOH . R 11 HOH A 26 526 45 HOH HOH . R 11 HOH A 27 527 110 HOH HOH . R 11 HOH A 28 528 54 HOH HOH . R 11 HOH A 29 529 72 HOH HOH . R 11 HOH A 30 530 68 HOH HOH . R 11 HOH A 31 531 34 HOH HOH . R 11 HOH A 32 532 53 HOH HOH . R 11 HOH A 33 533 9 HOH HOH . R 11 HOH A 34 534 4 HOH HOH . R 11 HOH A 35 535 8 HOH HOH . R 11 HOH A 36 536 160 HOH HOH . R 11 HOH A 37 537 94 HOH HOH . R 11 HOH A 38 538 5 HOH HOH . R 11 HOH A 39 539 2 HOH HOH . R 11 HOH A 40 540 67 HOH HOH . R 11 HOH A 41 541 16 HOH HOH . R 11 HOH A 42 542 140 HOH HOH . R 11 HOH A 43 543 95 HOH HOH . R 11 HOH A 44 544 181 HOH HOH . R 11 HOH A 45 545 70 HOH HOH . R 11 HOH A 46 546 57 HOH HOH . R 11 HOH A 47 547 153 HOH HOH . R 11 HOH A 48 548 148 HOH HOH . R 11 HOH A 49 549 7 HOH HOH . R 11 HOH A 50 550 109 HOH HOH . R 11 HOH A 51 551 96 HOH HOH . R 11 HOH A 52 552 157 HOH HOH . R 11 HOH A 53 553 111 HOH HOH . R 11 HOH A 54 554 91 HOH HOH . R 11 HOH A 55 555 61 HOH HOH . R 11 HOH A 56 556 154 HOH HOH . R 11 HOH A 57 557 52 HOH HOH . R 11 HOH A 58 558 65 HOH HOH . R 11 HOH A 59 559 102 HOH HOH . R 11 HOH A 60 560 143 HOH HOH . R 11 HOH A 61 561 88 HOH HOH . R 11 HOH A 62 562 107 HOH HOH . R 11 HOH A 63 563 20 HOH HOH . R 11 HOH A 64 564 43 HOH HOH . R 11 HOH A 65 565 93 HOH HOH . R 11 HOH A 66 566 156 HOH HOH . R 11 HOH A 67 567 112 HOH HOH . R 11 HOH A 68 568 151 HOH HOH . R 11 HOH A 69 569 63 HOH HOH . R 11 HOH A 70 570 158 HOH HOH . R 11 HOH A 71 571 146 HOH HOH . R 11 HOH A 72 572 105 HOH HOH . R 11 HOH A 73 573 58 HOH HOH . R 11 HOH A 74 574 103 HOH HOH . R 11 HOH A 75 575 97 HOH HOH . R 11 HOH A 76 576 99 HOH HOH . R 11 HOH A 77 577 90 HOH HOH . R 11 HOH A 78 578 108 HOH HOH . R 11 HOH A 79 579 73 HOH HOH . R 11 HOH A 80 580 98 HOH HOH . R 11 HOH A 81 581 145 HOH HOH . R 11 HOH A 82 582 180 HOH HOH . R 11 HOH A 83 583 69 HOH HOH . R 11 HOH A 84 584 115 HOH HOH . R 11 HOH A 85 585 147 HOH HOH . R 11 HOH A 86 586 89 HOH HOH . R 11 HOH A 87 587 114 HOH HOH . R 11 HOH A 88 588 142 HOH HOH . R 11 HOH A 89 589 101 HOH HOH . R 11 HOH A 90 590 106 HOH HOH . R 11 HOH A 91 591 113 HOH HOH . R 11 HOH A 92 592 155 HOH HOH . R 11 HOH A 93 593 149 HOH HOH . R 11 HOH A 94 594 141 HOH HOH . R 11 HOH A 95 595 56 HOH HOH . R 11 HOH A 96 596 152 HOH HOH . R 11 HOH A 97 597 104 HOH HOH . R 11 HOH A 98 598 162 HOH HOH . S 11 HOH B 1 501 129 HOH HOH . S 11 HOH B 2 502 38 HOH HOH . S 11 HOH B 3 503 121 HOH HOH . S 11 HOH B 4 504 124 HOH HOH . S 11 HOH B 5 505 44 HOH HOH . S 11 HOH B 6 506 118 HOH HOH . S 11 HOH B 7 507 78 HOH HOH . S 11 HOH B 8 508 166 HOH HOH . S 11 HOH B 9 509 120 HOH HOH . S 11 HOH B 10 510 31 HOH HOH . S 11 HOH B 11 511 77 HOH HOH . S 11 HOH B 12 512 176 HOH HOH . S 11 HOH B 13 513 23 HOH HOH . S 11 HOH B 14 514 76 HOH HOH . S 11 HOH B 15 515 83 HOH HOH . S 11 HOH B 16 516 71 HOH HOH . S 11 HOH B 17 517 32 HOH HOH . S 11 HOH B 18 518 133 HOH HOH . S 11 HOH B 19 519 86 HOH HOH . S 11 HOH B 20 520 30 HOH HOH . S 11 HOH B 21 521 14 HOH HOH . S 11 HOH B 22 522 126 HOH HOH . S 11 HOH B 23 523 25 HOH HOH . S 11 HOH B 24 524 18 HOH HOH . S 11 HOH B 25 525 10 HOH HOH . S 11 HOH B 26 526 15 HOH HOH . S 11 HOH B 27 527 122 HOH HOH . S 11 HOH B 28 528 28 HOH HOH . S 11 HOH B 29 529 47 HOH HOH . S 11 HOH B 30 530 13 HOH HOH . S 11 HOH B 31 531 36 HOH HOH . S 11 HOH B 32 532 40 HOH HOH . S 11 HOH B 33 533 132 HOH HOH . S 11 HOH B 34 534 82 HOH HOH . S 11 HOH B 35 535 29 HOH HOH . S 11 HOH B 36 536 50 HOH HOH . S 11 HOH B 37 537 37 HOH HOH . S 11 HOH B 38 538 168 HOH HOH . S 11 HOH B 39 539 174 HOH HOH . S 11 HOH B 40 540 84 HOH HOH . S 11 HOH B 41 541 42 HOH HOH . S 11 HOH B 42 542 19 HOH HOH . S 11 HOH B 43 543 164 HOH HOH . S 11 HOH B 44 544 27 HOH HOH . S 11 HOH B 45 545 161 HOH HOH . S 11 HOH B 46 546 24 HOH HOH . S 11 HOH B 47 547 33 HOH HOH . S 11 HOH B 48 548 175 HOH HOH . S 11 HOH B 49 549 172 HOH HOH . S 11 HOH B 50 550 80 HOH HOH . S 11 HOH B 51 551 128 HOH HOH . S 11 HOH B 52 552 116 HOH HOH . S 11 HOH B 53 553 125 HOH HOH . S 11 HOH B 54 554 117 HOH HOH . S 11 HOH B 55 555 48 HOH HOH . S 11 HOH B 56 556 165 HOH HOH . S 11 HOH B 57 557 3 HOH HOH . S 11 HOH B 58 558 179 HOH HOH . S 11 HOH B 59 559 46 HOH HOH . S 11 HOH B 60 560 139 HOH HOH . S 11 HOH B 61 561 75 HOH HOH . S 11 HOH B 62 562 170 HOH HOH . S 11 HOH B 63 563 182 HOH HOH . S 11 HOH B 64 564 136 HOH HOH . S 11 HOH B 65 565 85 HOH HOH . S 11 HOH B 66 566 177 HOH HOH . S 11 HOH B 67 567 130 HOH HOH . S 11 HOH B 68 568 171 HOH HOH . S 11 HOH B 69 569 135 HOH HOH . S 11 HOH B 70 570 167 HOH HOH . S 11 HOH B 71 571 137 HOH HOH . S 11 HOH B 72 572 22 HOH HOH . S 11 HOH B 73 573 127 HOH HOH . S 11 HOH B 74 574 119 HOH HOH . S 11 HOH B 75 575 169 HOH HOH . S 11 HOH B 76 576 79 HOH HOH . S 11 HOH B 77 577 138 HOH HOH . S 11 HOH B 78 578 131 HOH HOH . S 11 HOH B 79 579 163 HOH HOH . S 11 HOH B 80 580 74 HOH HOH . S 11 HOH B 81 581 173 HOH HOH . S 11 HOH B 82 582 178 HOH HOH . S 11 HOH B 83 583 123 HOH HOH . S 11 HOH B 84 584 134 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . P 6 -21.032 11.998 -43.665 1 39.91 ? C1 EDO 406 B 1 HETATM 2 O O1 EDO . . . P 6 -19.685 12.272 -43.984 1 39.34 ? O1 EDO 406 B 1 HETATM 3 C C2 EDO . . . P 6 -21.515 10.726 -44.262 1 41.94 ? C2 EDO 406 B 1 HETATM 4 O O2 EDO . . . P 6 -22.917 10.549 -44.143 1 44.48 ? O2 EDO 406 B 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 4 #