data_7F80 # _model_server_result.job_id XGvha501MC_bSt4-2LT7wA _model_server_result.datetime_utc '2024-11-23 11:27:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7f80 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":900}' # _entry.id 7F80 # _exptl.entry_id 7F80 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 460.489 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(3R)-3-methyl-6-[2-[[5-methyl-2-[4-(trifluoromethyl)phenyl]imidazol-1-yl]methyl]phenoxy]hexanoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.89 _cell.angle_gamma 90 _cell.entry_id 7F80 _cell.length_a 39.687 _cell.length_b 74.991 _cell.length_c 96.341 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7F80 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C25 H27 F3 N2 O3' _chem_comp.formula_weight 460.489 _chem_comp.id 1KF _chem_comp.mon_nstd_flag . _chem_comp.name '(3R)-3-methyl-6-[2-[[5-methyl-2-[4-(trifluoromethyl)phenyl]imidazol-1-yl]methyl]phenoxy]hexanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O33 C2 1KF doub 1 n n O1 C2 1KF sing 2 n n C2 C3 1KF sing 3 n n C32 C31 1KF sing 4 n n C3 C4 1KF sing 5 n n C8 C7 1KF sing 6 n n C8 O9 1KF sing 7 n n C12 C11 1KF doub 8 n y C12 C13 1KF sing 9 n y C11 C10 1KF sing 10 n y C6 C4 1KF sing 11 n n C6 C7 1KF sing 12 n n C4 C5 1KF sing 13 n n C13 C14 1KF doub 14 n y C10 O9 1KF sing 15 n n C10 C15 1KF doub 16 n y C31 C30 1KF doub 17 n y C31 N17 1KF sing 18 n y C14 C15 1KF sing 19 n y C15 C16 1KF sing 20 n n C30 N29 1KF sing 21 n y C16 N17 1KF sing 22 n n N17 C18 1KF sing 23 n y N29 C18 1KF doub 24 n y C18 C19 1KF sing 25 n n C19 C20 1KF doub 26 n y C19 C28 1KF sing 27 n y C20 C21 1KF sing 28 n y C28 C27 1KF doub 29 n y C21 C22 1KF doub 30 n y C27 C22 1KF sing 31 n y C22 C23 1KF sing 32 n n C23 F25 1KF sing 33 n n C23 F24 1KF sing 34 n n C23 F26 1KF sing 35 n n C4 H34 1KF sing 36 n n C5 H38 1KF sing 37 n n C5 H37 1KF sing 38 n n C5 H39 1KF sing 39 n n C6 H41 1KF sing 40 n n C6 H40 1KF sing 41 n n C7 H42 1KF sing 42 n n C7 H43 1KF sing 43 n n C8 H45 1KF sing 44 n n C8 H44 1KF sing 45 n n C13 H48 1KF sing 46 n n C20 H52 1KF sing 47 n n C21 H53 1KF sing 48 n n C28 H55 1KF sing 49 n n O1 H1 1KF sing 50 n n C3 H36 1KF sing 51 n n C3 H35 1KF sing 52 n n C14 H49 1KF sing 53 n n C12 H47 1KF sing 54 n n C11 H46 1KF sing 55 n n C16 H51 1KF sing 56 n n C16 H50 1KF sing 57 n n C32 H57 1KF sing 58 n n C32 H59 1KF sing 59 n n C32 H58 1KF sing 60 n n C30 H56 1KF sing 61 n n C27 H54 1KF sing 62 n n # _atom_sites.entry_id 7F80 _atom_sites.fract_transf_matrix[1][1] 0.025197 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003493 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013335 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010479 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 1KF A 1 900 900 1KF LIG . D 2 1KF B 1 900 900 1KF LIG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 1KF . . . C 2 -0.587 2.576 48.206 1 33.87 ? C4 1KF 900 A 1 HETATM 2 C C5 1KF . . . C 2 -1.027 2.868 49.635 1 33.53 ? C5 1KF 900 A 1 HETATM 3 C C6 1KF . . . C 2 0.173 1.237 48.079 1 31.46 ? C6 1KF 900 A 1 HETATM 4 C C7 1KF . . . C 2 -0.737 0.031 48.289 1 28.52 ? C7 1KF 900 A 1 HETATM 5 C C8 1KF . . . C 2 -0.093 -1.228 47.738 1 28.49 ? C8 1KF 900 A 1 HETATM 6 C C10 1KF . . . C 2 1.778 -2.753 48.357 1 27.9 ? C10 1KF 900 A 1 HETATM 7 C C13 1KF . . . C 2 3.21 -5.164 48.255 1 26.89 ? C13 1KF 900 A 1 HETATM 8 C C15 1KF . . . C 2 3.096 -2.838 48.761 1 28.32 ? C15 1KF 900 A 1 HETATM 9 C C20 1KF . . . C 2 4.01 -1.957 52.319 1 38.52 ? C20 1KF 900 A 1 HETATM 10 C C21 1KF . . . C 2 3.609 -2.115 53.643 1 39.14 ? C21 1KF 900 A 1 HETATM 11 C C22 1KF . . . C 2 4.549 -2.141 54.647 1 39.52 ? C22 1KF 900 A 1 HETATM 12 C C28 1KF . . . C 2 6.278 -1.837 52.985 1 38.26 ? C28 1KF 900 A 1 HETATM 13 O O33 1KF . . . C 2 -0.404 2.913 45.59 1 36.41 ? O33 1KF 900 A 1 HETATM 14 C C2 1KF . . . C 2 0.234 3.816 46.186 1 36.2 ? C2 1KF 900 A 1 HETATM 15 O O1 1KF . . . C 2 0.848 4.755 45.61 1 35.99 ? O1 1KF 900 A 1 HETATM 16 C C3 1KF . . . C 2 0.237 3.762 47.692 1 34.99 ? C3 1KF 900 A 1 HETATM 17 O O9 1KF . . . C 2 1.118 -1.548 48.439 1 27.48 ? O9 1KF 900 A 1 HETATM 18 C C14 1KF . . . C 2 3.819 -4.016 48.729 1 27.63 ? C14 1KF 900 A 1 HETATM 19 C C12 1KF . . . C 2 1.887 -5.108 47.84 1 27.79 ? C12 1KF 900 A 1 HETATM 20 C C11 1KF . . . C 2 1.173 -3.909 47.885 1 28.84 ? C11 1KF 900 A 1 HETATM 21 C C16 1KF . . . C 2 3.709 -1.593 49.238 1 29.65 ? C16 1KF 900 A 1 HETATM 22 N N17 1KF . . . C 2 5.137 -1.607 49.492 1 32.58 ? N17 1KF 900 A 1 HETATM 23 C C31 1KF . . . C 2 6.033 -1.417 48.521 1 34.65 ? C31 1KF 900 A 1 HETATM 24 C C32 1KF . . . C 2 5.94 -1.25 47.013 1 33.26 ? C32 1KF 900 A 1 HETATM 25 C C30 1KF . . . C 2 7.298 -1.39 49.07 1 35.82 ? C30 1KF 900 A 1 HETATM 26 N N29 1KF . . . C 2 7.135 -1.531 50.402 1 35.45 ? N29 1KF 900 A 1 HETATM 27 C C18 1KF . . . C 2 5.815 -1.653 50.668 1 35.06 ? C18 1KF 900 A 1 HETATM 28 C C19 1KF . . . C 2 5.351 -1.815 51.972 1 36.45 ? C19 1KF 900 A 1 HETATM 29 C C27 1KF . . . C 2 5.881 -2.001 54.31 1 41.59 ? C27 1KF 900 A 1 HETATM 30 C C23 1KF . . . C 2 4.123 -2.357 56.062 1 38.59 ? C23 1KF 900 A 1 HETATM 31 F F26 1KF . . . C 2 5.156 -2.527 56.857 1 34.18 ? F26 1KF 900 A 1 HETATM 32 F F25 1KF . . . C 2 3.497 -3.508 56.118 1 34.32 ? F25 1KF 900 A 1 HETATM 33 F F24 1KF . . . C 2 3.327 -1.37 56.431 1 46.22 ? F24 1KF 900 A 1 HETATM 34 H H34 1KF . . . C 2 -1.505 2.504 47.606 1 33.54 ? H34 1KF 900 A 1 HETATM 35 H H38 1KF . . . C 2 -0.176 3.079 50.225 1 33.6 ? H38 1KF 900 A 1 HETATM 36 H H37 1KF . . . C 2 -1.537 2.032 50.035 1 33.55 ? H37 1KF 900 A 1 HETATM 37 H H39 1KF . . . C 2 -1.674 3.707 49.639 1 33.62 ? H39 1KF 900 A 1 HETATM 38 H H41 1KF . . . C 2 0.986 1.213 48.803 1 31.27 ? H41 1KF 900 A 1 HETATM 39 H H40 1KF . . . C 2 0.627 1.166 47.089 1 31.29 ? H40 1KF 900 A 1 HETATM 40 H H42 1KF . . . C 2 -0.931 -0.1 49.356 1 29.2 ? H42 1KF 900 A 1 HETATM 41 H H43 1KF . . . C 2 -1.694 0.198 47.79 1 29.2 ? H43 1KF 900 A 1 HETATM 42 H H45 1KF . . . C 2 0.124 -1.096 46.676 1 28.27 ? H45 1KF 900 A 1 HETATM 43 H H44 1KF . . . C 2 -0.809 -2.045 47.834 1 28.26 ? H44 1KF 900 A 1 HETATM 44 H H48 1KF . . . C 2 3.759 -6.096 48.212 1 27.29 ? H48 1KF 900 A 1 HETATM 45 H H52 1KF . . . C 2 3.248 -1.923 51.564 1 37.97 ? H52 1KF 900 A 1 HETATM 46 H H53 1KF . . . C 2 2.56 -2.211 53.889 1 38.99 ? H53 1KF 900 A 1 HETATM 47 H H55 1KF . . . C 2 7.335 -1.763 52.764 1 38.39 ? H55 1KF 900 A 1 HETATM 48 H H36 1KF . . . C 2 -0.177 4.693 48.085 1 34.97 ? H36 1KF 900 A 1 HETATM 49 H H35 1KF . . . C 2 1.26 3.674 48.056 1 34.91 ? H35 1KF 900 A 1 HETATM 50 H H49 1KF . . . C 2 4.854 -4.045 49.044 1 27.66 ? H49 1KF 900 A 1 HETATM 51 H H47 1KF . . . C 2 1.408 -6.005 47.477 1 27.84 ? H47 1KF 900 A 1 HETATM 52 H H46 1KF . . . C 2 0.141 -3.899 47.562 1 28.35 ? H46 1KF 900 A 1 HETATM 53 H H51 1KF . . . C 2 3.166 -1.215 50.098 1 30.03 ? H51 1KF 900 A 1 HETATM 54 H H50 1KF . . . C 2 3.548 -0.847 48.456 1 30.01 ? H50 1KF 900 A 1 HETATM 55 H H57 1KF . . . C 2 6.898 -1.378 46.578 1 33.66 ? H57 1KF 900 A 1 HETATM 56 H H59 1KF . . . C 2 5.577 -0.28 46.79 1 33.55 ? H59 1KF 900 A 1 HETATM 57 H H58 1KF . . . C 2 5.275 -1.974 46.619 1 33.65 ? H58 1KF 900 A 1 HETATM 58 H H56 1KF . . . C 2 8.234 -1.258 48.541 1 35.41 ? H56 1KF 900 A 1 HETATM 59 H H54 1KF . . . C 2 6.634 -2.05 55.084 1 39.88 ? H54 1KF 900 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 59 #