data_7F97 # _model_server_result.job_id GtQcyKXQxXbrbfq1AfkdBw _model_server_result.datetime_utc '2024-11-08 21:06:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7f97 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":801}' # _entry.id 7F97 # _exptl.entry_id 7F97 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 115.13 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PROLINE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7F97 _cell.length_a 82.02 _cell.length_b 140.6 _cell.length_c 187.09 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7F97 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,K,L,M,N,O,Y,Z 1 1 C,D,P,Q,R,S,T,U,V,W,X,AA,BA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 K N N ? 2 P N N ? 2 U N N # _chem_comp.formula 'C5 H9 N O2' _chem_comp.formula_weight 115.13 _chem_comp.id PRO _chem_comp.mon_nstd_flag y _chem_comp.name PROLINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA PRO sing 363 n n N CD PRO sing 364 n n N H PRO sing 365 n n CA C PRO sing 366 n n CA CB PRO sing 367 n n CA HA PRO sing 368 n n C O PRO doub 369 n n C OXT PRO sing 370 n n CB CG PRO sing 371 n n CB HB2 PRO sing 372 n n CB HB3 PRO sing 373 n n CG CD PRO sing 374 n n CG HG2 PRO sing 375 n n CG HG3 PRO sing 376 n n CD HD2 PRO sing 377 n n CD HD3 PRO sing 378 n n OXT HXT PRO sing 379 n n # _atom_sites.entry_id 7F97 _atom_sites.fract_transf_matrix[1][1] 0.012192 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007112 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005345 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 PRO A 1 801 801 PRO PRO . F 3 1XK A 1 802 901 1XK 1XK . G 4 BU1 A 1 803 902 BU1 BU1 . H 5 CL A 1 804 903 CL CL . I 5 CL A 1 805 904 CL CL . J 5 CL A 1 806 905 CL CL . K 2 PRO B 1 801 801 PRO PRO . L 3 1XK B 1 802 901 1XK 1XK . M 5 CL B 1 803 902 CL CL . N 5 CL B 1 804 903 CL CL . O 5 CL B 1 805 904 CL CL . P 2 PRO C 1 801 801 PRO PRO . Q 3 1XK C 1 802 901 1XK 1XK . R 6 HEZ C 1 803 902 HEZ HEZ . S 5 CL C 1 804 903 CL CL . T 5 CL C 1 805 904 CL CL . U 2 PRO D 1 801 801 PRO PRO . V 3 1XK D 1 802 901 1XK 1XK . W 5 CL D 1 803 902 CL CL . X 5 CL D 1 804 903 CL CL . Y 7 HOH A 1 901 4 HOH HOH . Y 7 HOH A 2 902 1 HOH HOH . Y 7 HOH A 3 903 2 HOH HOH . Y 7 HOH A 4 904 23 HOH HOH . Y 7 HOH A 5 905 7 HOH HOH . Y 7 HOH A 6 906 15 HOH HOH . Y 7 HOH A 7 907 3 HOH HOH . Y 7 HOH A 8 908 6 HOH HOH . Y 7 HOH A 9 909 9 HOH HOH . Y 7 HOH A 10 910 17 HOH HOH . Y 7 HOH A 11 911 10 HOH HOH . Y 7 HOH A 12 912 5 HOH HOH . Y 7 HOH A 13 913 8 HOH HOH . Y 7 HOH A 14 914 12 HOH HOH . Y 7 HOH A 15 915 11 HOH HOH . Y 7 HOH A 16 916 13 HOH HOH . Y 7 HOH A 17 917 14 HOH HOH . Z 7 HOH B 1 901 25 HOH HOH . Z 7 HOH B 2 902 28 HOH HOH . Z 7 HOH B 3 903 24 HOH HOH . Z 7 HOH B 4 904 16 HOH HOH . Z 7 HOH B 5 905 27 HOH HOH . Z 7 HOH B 6 906 30 HOH HOH . Z 7 HOH B 7 907 29 HOH HOH . Z 7 HOH B 8 908 21 HOH HOH . Z 7 HOH B 9 909 32 HOH HOH . Z 7 HOH B 10 910 31 HOH HOH . Z 7 HOH B 11 911 34 HOH HOH . Z 7 HOH B 12 912 19 HOH HOH . Z 7 HOH B 13 913 33 HOH HOH . Z 7 HOH B 14 914 35 HOH HOH . Z 7 HOH B 15 915 26 HOH HOH . Z 7 HOH B 16 916 36 HOH HOH . AA 7 HOH C 1 901 45 HOH HOH . AA 7 HOH C 2 902 47 HOH HOH . AA 7 HOH C 3 903 46 HOH HOH . AA 7 HOH C 4 904 20 HOH HOH . AA 7 HOH C 5 905 48 HOH HOH . AA 7 HOH C 6 906 53 HOH HOH . AA 7 HOH C 7 907 22 HOH HOH . AA 7 HOH C 8 908 50 HOH HOH . AA 7 HOH C 9 909 49 HOH HOH . AA 7 HOH C 10 910 52 HOH HOH . AA 7 HOH C 11 911 55 HOH HOH . AA 7 HOH C 12 912 56 HOH HOH . AA 7 HOH C 13 913 54 HOH HOH . AA 7 HOH C 14 914 51 HOH HOH . BA 7 HOH D 1 901 39 HOH HOH . BA 7 HOH D 2 902 38 HOH HOH . BA 7 HOH D 3 903 40 HOH HOH . BA 7 HOH D 4 904 37 HOH HOH . BA 7 HOH D 5 905 44 HOH HOH . BA 7 HOH D 6 906 43 HOH HOH . BA 7 HOH D 7 907 42 HOH HOH . BA 7 HOH D 8 908 41 HOH HOH . BA 7 HOH D 9 909 18 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N PRO . . . P 2 58.736 27.108 10.888 0.84 60.47 ? N PRO 801 C 1 HETATM 2 C CA PRO . . . P 2 60.04 26.442 10.773 0.84 64.91 ? CA PRO 801 C 1 HETATM 3 C C PRO . . . P 2 60.009 25.248 9.825 0.84 65.44 ? C PRO 801 C 1 HETATM 4 O O PRO . . . P 2 59.027 25.016 9.114 0.84 60.77 ? O PRO 801 C 1 HETATM 5 C CB PRO . . . P 2 60.331 25.99 12.21 0.84 57.34 ? CB PRO 801 C 1 HETATM 6 C CG PRO . . . P 2 59.001 25.838 12.834 0.84 49.66 ? CG PRO 801 C 1 HETATM 7 C CD PRO . . . P 2 58.157 26.943 12.233 0.84 56.39 ? CD PRO 801 C 1 HETATM 8 O OXT PRO . . . P 2 60.981 24.498 9.737 0.84 64.57 ? OXT PRO 801 C 1 # _model_server_stats.io_time_ms 39 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #