data_7F97 # _model_server_result.job_id wwqCeMlhdhq2LVV5CPVueA _model_server_result.datetime_utc '2024-11-24 09:21:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7f97 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":802}' # _entry.id 7F97 # _exptl.entry_id 7F97 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 477.531 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[(3S)-3-cyclopropyl-3-(hydroxymethyl)-2-oxidanylidene-pyrrolidin-1-yl]-N-[[3-fluoranyl-5-(1-methylpyrazol-4-yl)phenyl]methyl]-6-methyl-pyridine-2-carboxamide _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7F97 _cell.length_a 82.02 _cell.length_b 140.6 _cell.length_c 187.09 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7F97 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,K,L,M,N,O,Y,Z 1 1 C,D,P,Q,R,S,T,U,V,W,X,AA,BA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 L N N ? 3 Q N N ? 3 V N N # _chem_comp.formula 'C26 H28 F N5 O3' _chem_comp.formula_weight 477.531 _chem_comp.id 1XK _chem_comp.mon_nstd_flag . _chem_comp.name 4-[(3S)-3-cyclopropyl-3-(hydroxymethyl)-2-oxidanylidene-pyrrolidin-1-yl]-N-[[3-fluoranyl-5-(1-methylpyrazol-4-yl)phenyl]methyl]-6-methyl-pyridine-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C24 C23 1XK sing 1 n n C24 C22 1XK sing 2 n n C23 C22 1XK sing 3 n n C22 C20 1XK sing 4 n n O1 C21 1XK sing 5 n n O2 C25 1XK doub 6 n n C20 C25 1XK sing 7 n n C20 C21 1XK sing 8 n n C20 C19 1XK sing 9 n n C25 N4 1XK sing 10 n n C C1 1XK sing 11 n n C2 C1 1XK doub 12 n y C2 C3 1XK sing 13 n y C19 C18 1XK sing 14 n n N4 C3 1XK sing 15 n n N4 C18 1XK sing 16 n n C1 N 1XK sing 17 n y C3 C4 1XK doub 18 n y N C5 1XK doub 19 n y C4 C5 1XK sing 20 n y C5 C6 1XK sing 21 n n C6 N1 1XK sing 22 n n C6 O 1XK doub 23 n n N1 C7 1XK sing 24 n n C7 C8 1XK sing 25 n n C8 C9 1XK doub 26 n y C8 C13 1XK sing 27 n y C9 C10 1XK sing 28 n y C13 C12 1XK doub 29 n y C10 F 1XK sing 30 n n C10 C11 1XK doub 31 n y C12 C11 1XK sing 32 n y C12 C14 1XK sing 33 n n C14 C15 1XK sing 34 n y C14 C17 1XK doub 35 n y C15 N2 1XK doub 36 n y C17 N3 1XK sing 37 n y N2 N3 1XK sing 38 n y N3 C16 1XK sing 39 n n C4 H1 1XK sing 40 n n C H2 1XK sing 41 n n C H3 1XK sing 42 n n C H4 1XK sing 43 n n N1 H5 1XK sing 44 n n C2 H6 1XK sing 45 n n C11 H7 1XK sing 46 n n C13 H8 1XK sing 47 n n C15 H9 1XK sing 48 n n C16 H10 1XK sing 49 n n C16 H11 1XK sing 50 n n C16 H12 1XK sing 51 n n C17 H13 1XK sing 52 n n C18 H14 1XK sing 53 n n C18 H15 1XK sing 54 n n C19 H16 1XK sing 55 n n C19 H17 1XK sing 56 n n C21 H18 1XK sing 57 n n C21 H19 1XK sing 58 n n C22 H20 1XK sing 59 n n C23 H21 1XK sing 60 n n C23 H22 1XK sing 61 n n C24 H23 1XK sing 62 n n C24 H24 1XK sing 63 n n C7 H25 1XK sing 64 n n C7 H26 1XK sing 65 n n C9 H27 1XK sing 66 n n O1 H28 1XK sing 67 n n # _atom_sites.entry_id 7F97 _atom_sites.fract_transf_matrix[1][1] 0.012192 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007112 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005345 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 PRO A 1 801 801 PRO PRO . F 3 1XK A 1 802 901 1XK 1XK . G 4 BU1 A 1 803 902 BU1 BU1 . H 5 CL A 1 804 903 CL CL . I 5 CL A 1 805 904 CL CL . J 5 CL A 1 806 905 CL CL . K 2 PRO B 1 801 801 PRO PRO . L 3 1XK B 1 802 901 1XK 1XK . M 5 CL B 1 803 902 CL CL . N 5 CL B 1 804 903 CL CL . O 5 CL B 1 805 904 CL CL . P 2 PRO C 1 801 801 PRO PRO . Q 3 1XK C 1 802 901 1XK 1XK . R 6 HEZ C 1 803 902 HEZ HEZ . S 5 CL C 1 804 903 CL CL . T 5 CL C 1 805 904 CL CL . U 2 PRO D 1 801 801 PRO PRO . V 3 1XK D 1 802 901 1XK 1XK . W 5 CL D 1 803 902 CL CL . X 5 CL D 1 804 903 CL CL . Y 7 HOH A 1 901 4 HOH HOH . Y 7 HOH A 2 902 1 HOH HOH . Y 7 HOH A 3 903 2 HOH HOH . Y 7 HOH A 4 904 23 HOH HOH . Y 7 HOH A 5 905 7 HOH HOH . Y 7 HOH A 6 906 15 HOH HOH . Y 7 HOH A 7 907 3 HOH HOH . Y 7 HOH A 8 908 6 HOH HOH . Y 7 HOH A 9 909 9 HOH HOH . Y 7 HOH A 10 910 17 HOH HOH . Y 7 HOH A 11 911 10 HOH HOH . Y 7 HOH A 12 912 5 HOH HOH . Y 7 HOH A 13 913 8 HOH HOH . Y 7 HOH A 14 914 12 HOH HOH . Y 7 HOH A 15 915 11 HOH HOH . Y 7 HOH A 16 916 13 HOH HOH . Y 7 HOH A 17 917 14 HOH HOH . Z 7 HOH B 1 901 25 HOH HOH . Z 7 HOH B 2 902 28 HOH HOH . Z 7 HOH B 3 903 24 HOH HOH . Z 7 HOH B 4 904 16 HOH HOH . Z 7 HOH B 5 905 27 HOH HOH . Z 7 HOH B 6 906 30 HOH HOH . Z 7 HOH B 7 907 29 HOH HOH . Z 7 HOH B 8 908 21 HOH HOH . Z 7 HOH B 9 909 32 HOH HOH . Z 7 HOH B 10 910 31 HOH HOH . Z 7 HOH B 11 911 34 HOH HOH . Z 7 HOH B 12 912 19 HOH HOH . Z 7 HOH B 13 913 33 HOH HOH . Z 7 HOH B 14 914 35 HOH HOH . Z 7 HOH B 15 915 26 HOH HOH . Z 7 HOH B 16 916 36 HOH HOH . AA 7 HOH C 1 901 45 HOH HOH . AA 7 HOH C 2 902 47 HOH HOH . AA 7 HOH C 3 903 46 HOH HOH . AA 7 HOH C 4 904 20 HOH HOH . AA 7 HOH C 5 905 48 HOH HOH . AA 7 HOH C 6 906 53 HOH HOH . AA 7 HOH C 7 907 22 HOH HOH . AA 7 HOH C 8 908 50 HOH HOH . AA 7 HOH C 9 909 49 HOH HOH . AA 7 HOH C 10 910 52 HOH HOH . AA 7 HOH C 11 911 55 HOH HOH . AA 7 HOH C 12 912 56 HOH HOH . AA 7 HOH C 13 913 54 HOH HOH . AA 7 HOH C 14 914 51 HOH HOH . BA 7 HOH D 1 901 39 HOH HOH . BA 7 HOH D 2 902 38 HOH HOH . BA 7 HOH D 3 903 40 HOH HOH . BA 7 HOH D 4 904 37 HOH HOH . BA 7 HOH D 5 905 44 HOH HOH . BA 7 HOH D 6 906 43 HOH HOH . BA 7 HOH D 7 907 42 HOH HOH . BA 7 HOH D 8 908 41 HOH HOH . BA 7 HOH D 9 909 18 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 1XK . . . F 3 25.234 -19.89 -8.414 1 48.8 ? C4 1XK 802 A 1 HETATM 2 C C 1XK . . . F 3 27.594 -22.382 -10.992 1 46.55 ? C 1XK 802 A 1 HETATM 3 N N 1XK . . . F 3 27.177 -21.241 -8.805 1 52.56 ? N 1XK 802 A 1 HETATM 4 N N1 1XK . . . F 3 28.301 -20.155 -6.297 1 52.19 ? N1 1XK 802 A 1 HETATM 5 C C3 1XK . . . F 3 24.799 -20.138 -9.7 1 51.98 ? C3 1XK 802 A 1 HETATM 6 C C2 1XK . . . F 3 25.573 -20.954 -10.532 1 56.36 ? C2 1XK 802 A 1 HETATM 7 C C1 1XK . . . F 3 26.764 -21.494 -10.05 1 52.25 ? C1 1XK 802 A 1 HETATM 8 O O 1XK . . . F 3 26.047 -19.821 -5.805 1 54.65 ? O 1XK 802 A 1 HETATM 9 C C10 1XK . . . F 3 30.157 -22.866 -3.183 1 62.77 ? C10 1XK 802 A 1 HETATM 10 C C11 1XK . . . F 3 29.021 -23.366 -2.54 1 58.27 ? C11 1XK 802 A 1 HETATM 11 C C12 1XK . . . F 3 27.797 -22.709 -2.678 1 60.98 ? C12 1XK 802 A 1 HETATM 12 C C13 1XK . . . F 3 27.698 -21.565 -3.473 1 49.66 ? C13 1XK 802 A 1 HETATM 13 C C14 1XK . . . F 3 26.547 -23.283 -1.981 1 71.52 ? C14 1XK 802 A 1 HETATM 14 C C15 1XK . . . F 3 25.387 -22.591 -1.527 1 74.57 ? C15 1XK 802 A 1 HETATM 15 C C16 1XK . . . F 3 24.5 -25.957 -0.624 1 87.31 ? C16 1XK 802 A 1 HETATM 16 C C17 1XK . . . F 3 26.311 -24.645 -1.674 1 70.8 ? C17 1XK 802 A 1 HETATM 17 C C18 1XK . . . F 3 22.732 -18.736 -9.485 1 52.9 ? C18 1XK 802 A 1 HETATM 18 C C19 1XK . . . F 3 21.2 -18.967 -10.098 1 57.61 ? C19 1XK 802 A 1 HETATM 19 C C20 1XK . . . F 3 21.4 -19.302 -11.378 1 63.57 ? C20 1XK 802 A 1 HETATM 20 C C21 1XK . . . F 3 20.203 -20.064 -12.004 1 72.97 ? C21 1XK 802 A 1 HETATM 21 C C22 1XK . . . F 3 21.798 -18.005 -12.215 1 67.39 ? C22 1XK 802 A 1 HETATM 22 C C23 1XK . . . F 3 22.417 -16.761 -12.266 1 67.22 ? C23 1XK 802 A 1 HETATM 23 C C24 1XK . . . F 3 21.789 -17.275 -13.399 1 65.43 ? C24 1XK 802 A 1 HETATM 24 C C25 1XK . . . F 3 22.614 -20.275 -11.253 1 57.42 ? C25 1XK 802 A 1 HETATM 25 C C5 1XK . . . F 3 26.434 -20.468 -8.016 1 51.32 ? C5 1XK 802 A 1 HETATM 26 C C6 1XK . . . F 3 26.873 -20.132 -6.599 1 51.36 ? C6 1XK 802 A 1 HETATM 27 C C7 1XK . . . F 3 28.778 -19.809 -4.962 1 55.91 ? C7 1XK 802 A 1 HETATM 28 C C8 1XK . . . F 3 28.848 -21.078 -4.106 1 53.3 ? C8 1XK 802 A 1 HETATM 29 C C9 1XK . . . F 3 30.081 -21.715 -3.966 1 57.86 ? C9 1XK 802 A 1 HETATM 30 F F 1XK . . . F 3 31.35 -23.509 -3.035 1 67.77 ? F 1XK 802 A 1 HETATM 31 N N2 1XK . . . F 3 24.573 -23.494 -1.013 1 72.25 ? N2 1XK 802 A 1 HETATM 32 N N3 1XK . . . F 3 25.123 -24.712 -1.098 1 79.12 ? N3 1XK 802 A 1 HETATM 33 N N4 1XK . . . F 3 23.541 -19.564 -10.174 1 53.17 ? N4 1XK 802 A 1 HETATM 34 O O1 1XK . . . F 3 19.126 -19.165 -12.132 1 80.06 ? O1 1XK 802 A 1 HETATM 35 O O2 1XK . . . F 3 23.206 -20.464 -12.355 1 57.7 ? O2 1XK 802 A 1 # _model_server_stats.io_time_ms 35 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 35 #