data_7F9D
#
_model_server_result.job_id            2oQOYPj0gEEh-R1FxPS8DQ 
_model_server_result.datetime_utc      '2024-11-08 13:02:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7f9d 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":1905}' 
#
_entry.id    7F9D 
#
_exptl.entry_id    7F9D 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7F9D 
_cell.length_a            70.49 
_cell.length_b            106.13 
_cell.length_c            145.55 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7F9D 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 F N N 
? 4 G N N 
? 4 P N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O ASP 89 A ASP 1096 1_555 E CA CA . A CA 1903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.781 ? 
metalc ? metalc2 A OE1 GLU 93 A GLU 1100 1_555 E CA CA . A CA 1903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.57 ? 
metalc ? metalc3 A SG CYS 441 A CYS 1448 1_555 D ZN ZN . A ZN 1902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? 
metalc ? metalc4 A OE1 GLU 443 A GLU 1450 1_555 F CA CA . A CA 1904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.954 ? 
metalc ? metalc5 A OE2 GLU 443 A GLU 1450 1_555 F CA CA . A CA 1904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.521 ? 
metalc ? metalc6 A SG CYS 446 A CYS 1453 1_555 D ZN ZN . A ZN 1902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? 
metalc ? metalc7 A OD1 ASP 459 A ASP 1466 1_555 G CA CA . A CA 1905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.681 ? 
metalc ? metalc8 A O LEU 460 A LEU 1467 1_555 G CA CA . A CA 1905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.094 ? 
metalc ? metalc9 A SG CYS 488 A CYS 1495 1_555 D ZN ZN . A ZN 1902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? 
metalc ? metalc10 A SG CYS 490 A CYS 1497 1_555 D ZN ZN . A ZN 1902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? 
metalc ? metalc11 E CA CA . A CA 1903 1_555 S O HOH . A HOH 2017 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.021 ? 
metalc ? metalc12 E CA CA . A CA 1903 1_555 S O HOH . A HOH 2050 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? 
metalc ? metalc13 F CA CA . A CA 1904 1_555 S O HOH . A HOH 2039 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? 
metalc ? metalc14 F CA CA . A CA 1904 3_645 B OG SER 369 B SER 1376 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.689 ? 
metalc ? metalc15 F CA CA . A CA 1904 3_645 B OE1 GLN 371 B GLN 1378 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.411 ? 
metalc ? metalc16 G CA CA . A CA 1905 2_555 B OE1 GLU 389 B GLU 1396 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.173 ? 
metalc ? metalc17 G CA CA . A CA 1905 2_555 B OE2 GLU 389 B GLU 1396 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.688 ? 
metalc ? metalc18 B O ASP 89 B ASP 1096 1_555 P CA CA . B CA 1604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.666 ? 
metalc ? metalc19 B OE2 GLU 93 B GLU 1100 1_555 P CA CA . B CA 1604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.823 ? 
metalc ? metalc20 B SG CYS 441 B CYS 1448 1_555 O ZN ZN . B ZN 1603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? 
metalc ? metalc21 B SG CYS 446 B CYS 1453 1_555 O ZN ZN . B ZN 1603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? 
metalc ? metalc22 B SG CYS 488 B CYS 1495 1_555 O ZN ZN . B ZN 1603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? 
metalc ? metalc23 B SG CYS 490 B CYS 1497 1_555 O ZN ZN . B ZN 1603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7F9D 
_atom_sites.fract_transf_matrix[1][1]    0.014186 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009422 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00687 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 1UI A 1 1901 1901 1UI L96 . 
D 3 ZN A 1 1902 2001 ZN ZN . 
E 4 CA A 1 1903 2002 CA CA . 
F 4 CA A 1 1904 2003 CA CA . 
G 4 CA A 1 1905 2004 CA CA . 
H 5 CL A 1 1906 2005 CL CL . 
I 5 CL A 1 1907 2007 CL CL . 
J 5 CL A 1 1908 2008 CL CL . 
K 6 PRO A 1 1909 1801 PRO PRO . 
L 5 CL A 1 1910 2009 CL CL . 
M 5 CL B 1 1601 2006 CL CL . 
N 2 1UI B 1 1602 1901 1UI L96 . 
O 3 ZN B 1 1603 2001 ZN ZN . 
P 4 CA B 1 1604 2002 CA CA . 
Q 5 CL B 1 1605 2003 CL CL . 
R 6 PRO B 1 1606 1801 PRO PRO . 
S 7 HOH A 1 2001 13 HOH HOH . 
S 7 HOH A 2 2002 30 HOH HOH . 
S 7 HOH A 3 2003 7 HOH HOH . 
S 7 HOH A 4 2004 47 HOH HOH . 
S 7 HOH A 5 2005 2 HOH HOH . 
S 7 HOH A 6 2006 40 HOH HOH . 
S 7 HOH A 7 2007 58 HOH HOH . 
S 7 HOH A 8 2008 50 HOH HOH . 
S 7 HOH A 9 2009 24 HOH HOH . 
S 7 HOH A 10 2010 105 HOH HOH . 
S 7 HOH A 11 2011 84 HOH HOH . 
S 7 HOH A 12 2012 46 HOH HOH . 
S 7 HOH A 13 2013 28 HOH HOH . 
S 7 HOH A 14 2014 70 HOH HOH . 
S 7 HOH A 15 2015 3 HOH HOH . 
S 7 HOH A 16 2016 11 HOH HOH . 
S 7 HOH A 17 2017 26 HOH HOH . 
S 7 HOH A 18 2018 1 HOH HOH . 
S 7 HOH A 19 2019 69 HOH HOH . 
S 7 HOH A 20 2020 18 HOH HOH . 
S 7 HOH A 21 2021 33 HOH HOH . 
S 7 HOH A 22 2022 91 HOH HOH . 
S 7 HOH A 23 2023 20 HOH HOH . 
S 7 HOH A 24 2024 8 HOH HOH . 
S 7 HOH A 25 2025 76 HOH HOH . 
S 7 HOH A 26 2026 4 HOH HOH . 
S 7 HOH A 27 2027 71 HOH HOH . 
S 7 HOH A 28 2028 92 HOH HOH . 
S 7 HOH A 29 2029 10 HOH HOH . 
S 7 HOH A 30 2030 82 HOH HOH . 
S 7 HOH A 31 2031 51 HOH HOH . 
S 7 HOH A 32 2032 83 HOH HOH . 
S 7 HOH A 33 2033 42 HOH HOH . 
S 7 HOH A 34 2034 34 HOH HOH . 
S 7 HOH A 35 2035 54 HOH HOH . 
S 7 HOH A 36 2036 59 HOH HOH . 
S 7 HOH A 37 2037 75 HOH HOH . 
S 7 HOH A 38 2038 16 HOH HOH . 
S 7 HOH A 39 2039 65 HOH HOH . 
S 7 HOH A 40 2040 74 HOH HOH . 
S 7 HOH A 41 2041 49 HOH HOH . 
S 7 HOH A 42 2042 113 HOH HOH . 
S 7 HOH A 43 2043 94 HOH HOH . 
S 7 HOH A 44 2044 14 HOH HOH . 
S 7 HOH A 45 2045 111 HOH HOH . 
S 7 HOH A 46 2046 27 HOH HOH . 
S 7 HOH A 47 2047 86 HOH HOH . 
S 7 HOH A 48 2048 61 HOH HOH . 
S 7 HOH A 49 2049 68 HOH HOH . 
S 7 HOH A 50 2050 17 HOH HOH . 
S 7 HOH A 51 2051 93 HOH HOH . 
S 7 HOH A 52 2052 88 HOH HOH . 
S 7 HOH A 53 2053 108 HOH HOH . 
S 7 HOH A 54 2054 104 HOH HOH . 
S 7 HOH A 55 2055 103 HOH HOH . 
S 7 HOH A 56 2056 89 HOH HOH . 
S 7 HOH A 57 2057 109 HOH HOH . 
S 7 HOH A 58 2058 99 HOH HOH . 
S 7 HOH A 59 2059 98 HOH HOH . 
S 7 HOH A 60 2060 102 HOH HOH . 
S 7 HOH A 61 2061 100 HOH HOH . 
S 7 HOH A 62 2062 101 HOH HOH . 
S 7 HOH A 63 2063 63 HOH HOH . 
T 7 HOH B 1 1701 36 HOH HOH . 
T 7 HOH B 2 1702 79 HOH HOH . 
T 7 HOH B 3 1703 72 HOH HOH . 
T 7 HOH B 4 1704 55 HOH HOH . 
T 7 HOH B 5 1705 41 HOH HOH . 
T 7 HOH B 6 1706 60 HOH HOH . 
T 7 HOH B 7 1707 19 HOH HOH . 
T 7 HOH B 8 1708 12 HOH HOH . 
T 7 HOH B 9 1709 21 HOH HOH . 
T 7 HOH B 10 1710 9 HOH HOH . 
T 7 HOH B 11 1711 38 HOH HOH . 
T 7 HOH B 12 1712 37 HOH HOH . 
T 7 HOH B 13 1713 31 HOH HOH . 
T 7 HOH B 14 1714 53 HOH HOH . 
T 7 HOH B 15 1715 39 HOH HOH . 
T 7 HOH B 16 1716 5 HOH HOH . 
T 7 HOH B 17 1717 32 HOH HOH . 
T 7 HOH B 18 1718 35 HOH HOH . 
T 7 HOH B 19 1719 73 HOH HOH . 
T 7 HOH B 20 1720 15 HOH HOH . 
T 7 HOH B 21 1721 87 HOH HOH . 
T 7 HOH B 22 1722 66 HOH HOH . 
T 7 HOH B 23 1723 62 HOH HOH . 
T 7 HOH B 24 1724 25 HOH HOH . 
T 7 HOH B 25 1725 81 HOH HOH . 
T 7 HOH B 26 1726 64 HOH HOH . 
T 7 HOH B 27 1727 97 HOH HOH . 
T 7 HOH B 28 1728 44 HOH HOH . 
T 7 HOH B 29 1729 52 HOH HOH . 
T 7 HOH B 30 1730 57 HOH HOH . 
T 7 HOH B 31 1731 23 HOH HOH . 
T 7 HOH B 32 1732 29 HOH HOH . 
T 7 HOH B 33 1733 85 HOH HOH . 
T 7 HOH B 34 1734 43 HOH HOH . 
T 7 HOH B 35 1735 6 HOH HOH . 
T 7 HOH B 36 1736 48 HOH HOH . 
T 7 HOH B 37 1737 22 HOH HOH . 
T 7 HOH B 38 1738 90 HOH HOH . 
T 7 HOH B 39 1739 45 HOH HOH . 
T 7 HOH B 40 1740 107 HOH HOH . 
T 7 HOH B 41 1741 56 HOH HOH . 
T 7 HOH B 42 1742 80 HOH HOH . 
T 7 HOH B 43 1743 110 HOH HOH . 
T 7 HOH B 44 1744 106 HOH HOH . 
T 7 HOH B 45 1745 96 HOH HOH . 
T 7 HOH B 46 1746 78 HOH HOH . 
T 7 HOH B 47 1747 95 HOH HOH . 
T 7 HOH B 48 1748 67 HOH HOH . 
T 7 HOH B 49 1749 77 HOH HOH . 
T 7 HOH B 50 1750 112 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         G 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               19.156 
_atom_site.Cartn_y               23.171 
_atom_site.Cartn_z               -12.034 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        80.36 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           1905 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              24 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    22 
_model_server_stats.query_time_ms           301 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#