data_7F9S # _model_server_result.job_id U1R_v2rghTiWQG-G-RHRUw _model_server_result.datetime_utc '2024-12-12 16:52:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7f9s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":904}' # _entry.id 7F9S # _exptl.entry_id 7F9S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.39 _cell.angle_gamma 90 _cell.entry_id 7F9S _cell.length_a 116.51 _cell.length_b 73.65 _cell.length_c 75.03 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7F9S _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 188 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 518 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id F _struct_conn.ptnr2_label_atom_id S2 _struct_conn.ptnr2_label_comp_id BME _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id BME _struct_conn.ptnr2_auth_seq_id 905 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.054 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 275 n n C1 C2 GOL sing 276 n n C1 H11 GOL sing 277 n n C1 H12 GOL sing 278 n n O1 HO1 GOL sing 279 n n C2 O2 GOL sing 280 n n C2 C3 GOL sing 281 n n C2 H2 GOL sing 282 n n O2 HO2 GOL sing 283 n n C3 O3 GOL sing 284 n n C3 H31 GOL sing 285 n n C3 H32 GOL sing 286 n n O3 HO3 GOL sing 287 n n # _atom_sites.entry_id 7F9S _atom_sites.fract_transf_matrix[1][1] 0.008583 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003362 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013578 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014314 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 1TI A 1 901 901 1TI T35 . C 3 9SF A 1 902 902 9SF 9SF . D 4 BCN A 1 903 903 BCN BCN . E 5 GOL A 1 904 904 GOL GOL . F 6 BME A 1 905 905 BME BME . G 7 FMT A 1 906 906 FMT FMT . H 7 FMT A 1 907 907 FMT FMT . I 7 FMT A 1 908 908 FMT FMT . J 8 HOH A 1 1001 161 HOH HOH . J 8 HOH A 2 1002 105 HOH HOH . J 8 HOH A 3 1003 84 HOH HOH . J 8 HOH A 4 1004 166 HOH HOH . J 8 HOH A 5 1005 15 HOH HOH . J 8 HOH A 6 1006 107 HOH HOH . J 8 HOH A 7 1007 191 HOH HOH . J 8 HOH A 8 1008 73 HOH HOH . J 8 HOH A 9 1009 34 HOH HOH . J 8 HOH A 10 1010 148 HOH HOH . J 8 HOH A 11 1011 63 HOH HOH . J 8 HOH A 12 1012 87 HOH HOH . J 8 HOH A 13 1013 181 HOH HOH . J 8 HOH A 14 1014 50 HOH HOH . J 8 HOH A 15 1015 59 HOH HOH . J 8 HOH A 16 1016 80 HOH HOH . J 8 HOH A 17 1017 49 HOH HOH . J 8 HOH A 18 1018 112 HOH HOH . J 8 HOH A 19 1019 195 HOH HOH . J 8 HOH A 20 1020 54 HOH HOH . J 8 HOH A 21 1021 9 HOH HOH . J 8 HOH A 22 1022 18 HOH HOH . J 8 HOH A 23 1023 78 HOH HOH . J 8 HOH A 24 1024 192 HOH HOH . J 8 HOH A 25 1025 1 HOH HOH . J 8 HOH A 26 1026 108 HOH HOH . J 8 HOH A 27 1027 21 HOH HOH . J 8 HOH A 28 1028 176 HOH HOH . J 8 HOH A 29 1029 24 HOH HOH . J 8 HOH A 30 1030 99 HOH HOH . J 8 HOH A 31 1031 28 HOH HOH . J 8 HOH A 32 1032 16 HOH HOH . J 8 HOH A 33 1033 43 HOH HOH . J 8 HOH A 34 1034 139 HOH HOH . J 8 HOH A 35 1035 103 HOH HOH . J 8 HOH A 36 1036 72 HOH HOH . J 8 HOH A 37 1037 125 HOH HOH . J 8 HOH A 38 1038 86 HOH HOH . J 8 HOH A 39 1039 91 HOH HOH . J 8 HOH A 40 1040 186 HOH HOH . J 8 HOH A 41 1041 71 HOH HOH . J 8 HOH A 42 1042 40 HOH HOH . J 8 HOH A 43 1043 53 HOH HOH . J 8 HOH A 44 1044 25 HOH HOH . J 8 HOH A 45 1045 106 HOH HOH . J 8 HOH A 46 1046 6 HOH HOH . J 8 HOH A 47 1047 175 HOH HOH . J 8 HOH A 48 1048 41 HOH HOH . J 8 HOH A 49 1049 111 HOH HOH . J 8 HOH A 50 1050 74 HOH HOH . J 8 HOH A 51 1051 26 HOH HOH . J 8 HOH A 52 1052 57 HOH HOH . J 8 HOH A 53 1053 2 HOH HOH . J 8 HOH A 54 1054 46 HOH HOH . J 8 HOH A 55 1055 101 HOH HOH . J 8 HOH A 56 1056 115 HOH HOH . J 8 HOH A 57 1057 32 HOH HOH . J 8 HOH A 58 1058 144 HOH HOH . J 8 HOH A 59 1059 180 HOH HOH . J 8 HOH A 60 1060 132 HOH HOH . J 8 HOH A 61 1061 3 HOH HOH . J 8 HOH A 62 1062 51 HOH HOH . J 8 HOH A 63 1063 37 HOH HOH . J 8 HOH A 64 1064 114 HOH HOH . J 8 HOH A 65 1065 88 HOH HOH . J 8 HOH A 66 1066 31 HOH HOH . J 8 HOH A 67 1067 124 HOH HOH . J 8 HOH A 68 1068 155 HOH HOH . J 8 HOH A 69 1069 208 HOH HOH . J 8 HOH A 70 1070 134 HOH HOH . J 8 HOH A 71 1071 12 HOH HOH . J 8 HOH A 72 1072 95 HOH HOH . J 8 HOH A 73 1073 127 HOH HOH . J 8 HOH A 74 1074 39 HOH HOH . J 8 HOH A 75 1075 98 HOH HOH . J 8 HOH A 76 1076 33 HOH HOH . J 8 HOH A 77 1077 69 HOH HOH . J 8 HOH A 78 1078 158 HOH HOH . J 8 HOH A 79 1079 5 HOH HOH . J 8 HOH A 80 1080 156 HOH HOH . J 8 HOH A 81 1081 70 HOH HOH . J 8 HOH A 82 1082 109 HOH HOH . J 8 HOH A 83 1083 190 HOH HOH . J 8 HOH A 84 1084 52 HOH HOH . J 8 HOH A 85 1085 82 HOH HOH . J 8 HOH A 86 1086 29 HOH HOH . J 8 HOH A 87 1087 65 HOH HOH . J 8 HOH A 88 1088 100 HOH HOH . J 8 HOH A 89 1089 83 HOH HOH . J 8 HOH A 90 1090 48 HOH HOH . J 8 HOH A 91 1091 141 HOH HOH . J 8 HOH A 92 1092 64 HOH HOH . J 8 HOH A 93 1093 4 HOH HOH . J 8 HOH A 94 1094 150 HOH HOH . J 8 HOH A 95 1095 36 HOH HOH . J 8 HOH A 96 1096 182 HOH HOH . J 8 HOH A 97 1097 137 HOH HOH . J 8 HOH A 98 1098 20 HOH HOH . J 8 HOH A 99 1099 11 HOH HOH . J 8 HOH A 100 1100 58 HOH HOH . J 8 HOH A 101 1101 152 HOH HOH . J 8 HOH A 102 1102 75 HOH HOH . J 8 HOH A 103 1103 120 HOH HOH . J 8 HOH A 104 1104 77 HOH HOH . J 8 HOH A 105 1105 138 HOH HOH . J 8 HOH A 106 1106 76 HOH HOH . J 8 HOH A 107 1107 204 HOH HOH . J 8 HOH A 108 1108 45 HOH HOH . J 8 HOH A 109 1109 56 HOH HOH . J 8 HOH A 110 1110 93 HOH HOH . J 8 HOH A 111 1111 149 HOH HOH . J 8 HOH A 112 1112 19 HOH HOH . J 8 HOH A 113 1113 92 HOH HOH . J 8 HOH A 114 1114 79 HOH HOH . J 8 HOH A 115 1115 35 HOH HOH . J 8 HOH A 116 1116 122 HOH HOH . J 8 HOH A 117 1117 174 HOH HOH . J 8 HOH A 118 1118 135 HOH HOH . J 8 HOH A 119 1119 7 HOH HOH . J 8 HOH A 120 1120 17 HOH HOH . J 8 HOH A 121 1121 113 HOH HOH . J 8 HOH A 122 1122 23 HOH HOH . J 8 HOH A 123 1123 164 HOH HOH . J 8 HOH A 124 1124 185 HOH HOH . J 8 HOH A 125 1125 14 HOH HOH . J 8 HOH A 126 1126 209 HOH HOH . J 8 HOH A 127 1127 201 HOH HOH . J 8 HOH A 128 1128 44 HOH HOH . J 8 HOH A 129 1129 62 HOH HOH . J 8 HOH A 130 1130 27 HOH HOH . J 8 HOH A 131 1131 196 HOH HOH . J 8 HOH A 132 1132 55 HOH HOH . J 8 HOH A 133 1133 10 HOH HOH . J 8 HOH A 134 1134 193 HOH HOH . J 8 HOH A 135 1135 8 HOH HOH . J 8 HOH A 136 1136 13 HOH HOH . J 8 HOH A 137 1137 165 HOH HOH . J 8 HOH A 138 1138 128 HOH HOH . J 8 HOH A 139 1139 102 HOH HOH . J 8 HOH A 140 1140 90 HOH HOH . J 8 HOH A 141 1141 60 HOH HOH . J 8 HOH A 142 1142 110 HOH HOH . J 8 HOH A 143 1143 130 HOH HOH . J 8 HOH A 144 1144 177 HOH HOH . J 8 HOH A 145 1145 154 HOH HOH . J 8 HOH A 146 1146 22 HOH HOH . J 8 HOH A 147 1147 131 HOH HOH . J 8 HOH A 148 1148 119 HOH HOH . J 8 HOH A 149 1149 146 HOH HOH . J 8 HOH A 150 1150 143 HOH HOH . J 8 HOH A 151 1151 67 HOH HOH . J 8 HOH A 152 1152 172 HOH HOH . J 8 HOH A 153 1153 85 HOH HOH . J 8 HOH A 154 1154 187 HOH HOH . J 8 HOH A 155 1155 188 HOH HOH . J 8 HOH A 156 1156 66 HOH HOH . J 8 HOH A 157 1157 89 HOH HOH . J 8 HOH A 158 1158 68 HOH HOH . J 8 HOH A 159 1159 179 HOH HOH . J 8 HOH A 160 1160 159 HOH HOH . J 8 HOH A 161 1161 42 HOH HOH . J 8 HOH A 162 1162 61 HOH HOH . J 8 HOH A 163 1163 142 HOH HOH . J 8 HOH A 164 1164 145 HOH HOH . J 8 HOH A 165 1165 81 HOH HOH . J 8 HOH A 166 1166 207 HOH HOH . J 8 HOH A 167 1167 167 HOH HOH . J 8 HOH A 168 1168 157 HOH HOH . J 8 HOH A 169 1169 183 HOH HOH . J 8 HOH A 170 1170 136 HOH HOH . J 8 HOH A 171 1171 178 HOH HOH . J 8 HOH A 172 1172 194 HOH HOH . J 8 HOH A 173 1173 169 HOH HOH . J 8 HOH A 174 1174 96 HOH HOH . J 8 HOH A 175 1175 197 HOH HOH . J 8 HOH A 176 1176 118 HOH HOH . J 8 HOH A 177 1177 121 HOH HOH . J 8 HOH A 178 1178 47 HOH HOH . J 8 HOH A 179 1179 162 HOH HOH . J 8 HOH A 180 1180 147 HOH HOH . J 8 HOH A 181 1181 153 HOH HOH . J 8 HOH A 182 1182 200 HOH HOH . J 8 HOH A 183 1183 206 HOH HOH . J 8 HOH A 184 1184 168 HOH HOH . J 8 HOH A 185 1185 189 HOH HOH . J 8 HOH A 186 1186 170 HOH HOH . J 8 HOH A 187 1187 116 HOH HOH . J 8 HOH A 188 1188 202 HOH HOH . J 8 HOH A 189 1189 30 HOH HOH . J 8 HOH A 190 1190 163 HOH HOH . J 8 HOH A 191 1191 173 HOH HOH . J 8 HOH A 192 1192 171 HOH HOH . J 8 HOH A 193 1193 160 HOH HOH . J 8 HOH A 194 1194 198 HOH HOH . J 8 HOH A 195 1195 97 HOH HOH . J 8 HOH A 196 1196 126 HOH HOH . J 8 HOH A 197 1197 184 HOH HOH . J 8 HOH A 198 1198 123 HOH HOH . J 8 HOH A 199 1199 38 HOH HOH . J 8 HOH A 200 1200 205 HOH HOH . J 8 HOH A 201 1201 94 HOH HOH . J 8 HOH A 202 1202 104 HOH HOH . J 8 HOH A 203 1203 140 HOH HOH . J 8 HOH A 204 1204 133 HOH HOH . J 8 HOH A 205 1205 151 HOH HOH . J 8 HOH A 206 1206 117 HOH HOH . J 8 HOH A 207 1207 203 HOH HOH . J 8 HOH A 208 1208 199 HOH HOH . J 8 HOH A 209 1209 129 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 5 30.293 -1.247 -12.846 1 84.11 ? C1 GOL 904 A 1 HETATM 2 O O1 GOL . . . E 5 30.182 -0.428 -13.999 1 80.25 ? O1 GOL 904 A 1 HETATM 3 C C2 GOL . . . E 5 31.487 -0.851 -12.009 1 85.96 ? C2 GOL 904 A 1 HETATM 4 O O2 GOL . . . E 5 31.777 0.525 -12.132 1 89.55 ? O2 GOL 904 A 1 HETATM 5 C C3 GOL . . . E 5 31.172 -1.161 -10.573 1 83.84 ? C3 GOL 904 A 1 HETATM 6 O O3 GOL . . . E 5 32.204 -0.613 -9.759 1 84.95 ? O3 GOL 904 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 32 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 6 #