data_7F9U # _model_server_result.job_id mLeI9-EHHeA6sriG4O17tw _model_server_result.datetime_utc '2024-11-24 05:34:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7f9u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":901}' # _entry.id 7F9U # _exptl.entry_id 7F9U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 414.681 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 7-bromo-6-chloro-3-{3-[(2R,3S)-3-hydroxypiperidin-2-yl]-2-oxopropyl}quinazolin-4(3H)-one _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7F9U _cell.length_a 76.573 _cell.length_b 76.573 _cell.length_c 403.841 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7F9U _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,H,I,J,K,L,X,Y,Z,AA,DA 1 1 B,C,M,N,O,P,Q,R,S,T,U,V,W,BA,CA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 M N N ? 2 T N N ? 2 X N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 176 A ASP 506 1_555 H CA CA . A CA 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? metalc ? metalc2 A OE2 GLU 304 A GLU 634 1_555 P CA CA . B CA 904 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 3.044 ? metalc ? metalc3 I CA CA . A CA 905 1_555 B OE1 GLU 404 B GLU 734 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.134 ? metalc ? metalc4 B OD1 ASP 176 B ASP 506 1_555 P CA CA . B CA 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc5 P CA CA . B CA 904 1_555 BA O HOH . B HOH 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? # _chem_comp.formula 'C16 H17 Br Cl N3 O3' _chem_comp.formula_weight 414.681 _chem_comp.id HFG _chem_comp.mon_nstd_flag . _chem_comp.name 7-bromo-6-chloro-3-{3-[(2R,3S)-3-hydroxypiperidin-2-yl]-2-oxopropyl}quinazolin-4(3H)-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Halofuginone # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL1 C6 HFG sing 196 n n C6 C5 HFG doub 197 n y C6 C7 HFG sing 198 n y BR1 C7 HFG sing 199 n n C5 C10 HFG sing 200 n y C7 C8 HFG doub 201 n y O11 C4 HFG doub 202 n n C10 C4 HFG sing 203 n n C10 C9 HFG doub 204 n y C8 C9 HFG sing 205 n y C4 N3 HFG sing 206 n n C9 N1 HFG sing 207 n n N1' C6' HFG sing 208 n n N1' C2' HFG sing 209 n n C6' C5' HFG sing 210 n n O4' C21 HFG doub 211 n n N3 C1' HFG sing 212 n n N3 C2 HFG sing 213 n n N1 C2 HFG doub 214 n n C21 C3' HFG sing 215 n n C21 C1' HFG sing 216 n n C3' C2' HFG sing 217 n n C2' C39 HFG sing 218 n n C5' C4' HFG sing 219 n n C39 C4' HFG sing 220 n n C39 O7' HFG sing 221 n n C3' H1 HFG sing 222 n n C3' H2 HFG sing 223 n n C2' H3 HFG sing 224 n n N1' H4 HFG sing 225 n n C6' H6 HFG sing 226 n n C6' H7 HFG sing 227 n n C5' H8 HFG sing 228 n n C5' H9 HFG sing 229 n n C4' H10 HFG sing 230 n n C4' H11 HFG sing 231 n n C39 H12 HFG sing 232 n n O7' H13 HFG sing 233 n n C1' H14 HFG sing 234 n n C1' H15 HFG sing 235 n n C5 H16 HFG sing 236 n n C2 H17 HFG sing 237 n n C8 H18 HFG sing 238 n n # _atom_sites.entry_id 7F9U _atom_sites.fract_transf_matrix[1][1] 0.013059 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013059 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002476 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 HFG A 1 901 901 HFG HFG . F 3 1TI A 1 902 1001 1TI T35 . G 4 BR A 1 903 1101 BR BR . H 5 CA A 1 904 1102 CA CA . I 5 CA A 1 905 1103 CA CA . J 6 CL A 1 906 1104 CL CL . K 6 CL A 1 907 1105 CL CL . L 6 CL A 1 908 1106 CL CL . M 2 HFG B 1 901 901 HFG HFG . N 3 1TI B 1 902 1001 1TI T35 . O 4 BR B 1 903 1101 BR BR . P 5 CA B 1 904 1102 CA CA . Q 6 CL B 1 905 1103 CL CL . R 6 CL B 1 906 1104 CL CL . S 6 CL B 1 907 1105 CL CL . T 2 HFG C 1 901 901 HFG HFG . U 3 1TI C 1 902 1001 1TI T35 . V 6 CL C 1 903 1102 CL CL . W 6 CL C 1 904 1103 CL CL . X 2 HFG D 1 901 901 HFG HFG . Y 3 1TI D 1 902 1001 1TI T35 . Z 4 BR D 1 903 1101 BR BR . AA 7 HOH A 1 1001 32 HOH HOH . AA 7 HOH A 2 1002 54 HOH HOH . AA 7 HOH A 3 1003 5 HOH HOH . AA 7 HOH A 4 1004 35 HOH HOH . AA 7 HOH A 5 1005 52 HOH HOH . AA 7 HOH A 6 1006 50 HOH HOH . AA 7 HOH A 7 1007 42 HOH HOH . AA 7 HOH A 8 1008 14 HOH HOH . AA 7 HOH A 9 1009 10 HOH HOH . AA 7 HOH A 10 1010 28 HOH HOH . AA 7 HOH A 11 1011 36 HOH HOH . AA 7 HOH A 12 1012 24 HOH HOH . AA 7 HOH A 13 1013 37 HOH HOH . AA 7 HOH A 14 1014 25 HOH HOH . AA 7 HOH A 15 1015 1 HOH HOH . BA 7 HOH B 1 1001 19 HOH HOH . BA 7 HOH B 2 1002 46 HOH HOH . BA 7 HOH B 3 1003 7 HOH HOH . BA 7 HOH B 4 1004 6 HOH HOH . BA 7 HOH B 5 1005 17 HOH HOH . BA 7 HOH B 6 1006 30 HOH HOH . BA 7 HOH B 7 1007 18 HOH HOH . BA 7 HOH B 8 1008 39 HOH HOH . BA 7 HOH B 9 1009 26 HOH HOH . BA 7 HOH B 10 1010 27 HOH HOH . BA 7 HOH B 11 1011 31 HOH HOH . BA 7 HOH B 12 1012 15 HOH HOH . BA 7 HOH B 13 1013 20 HOH HOH . BA 7 HOH B 14 1014 13 HOH HOH . BA 7 HOH B 15 1015 2 HOH HOH . CA 7 HOH C 1 1001 47 HOH HOH . CA 7 HOH C 2 1002 3 HOH HOH . CA 7 HOH C 3 1003 9 HOH HOH . CA 7 HOH C 4 1004 41 HOH HOH . CA 7 HOH C 5 1005 4 HOH HOH . CA 7 HOH C 6 1006 51 HOH HOH . CA 7 HOH C 7 1007 22 HOH HOH . CA 7 HOH C 8 1008 33 HOH HOH . CA 7 HOH C 9 1009 11 HOH HOH . CA 7 HOH C 10 1010 29 HOH HOH . CA 7 HOH C 11 1011 38 HOH HOH . CA 7 HOH C 12 1012 53 HOH HOH . CA 7 HOH C 13 1013 34 HOH HOH . CA 7 HOH C 14 1014 16 HOH HOH . DA 7 HOH D 1 1001 43 HOH HOH . DA 7 HOH D 2 1002 21 HOH HOH . DA 7 HOH D 3 1003 45 HOH HOH . DA 7 HOH D 4 1004 8 HOH HOH . DA 7 HOH D 5 1005 44 HOH HOH . DA 7 HOH D 6 1006 12 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O4' HFG . . . E 2 36.917 23.724 -13.102 0.61 20.56 ? O4' HFG 901 A 1 HETATM 2 C C21 HFG . . . E 2 37.885 24.256 -12.606 0.61 20.74 ? C21 HFG 901 A 1 HETATM 3 C C3' HFG . . . E 2 37.773 25.421 -11.656 0.61 20.69 ? C3' HFG 901 A 1 HETATM 4 C C2' HFG . . . E 2 36.466 25.48 -10.86 0.61 20.17 ? C2' HFG 901 A 1 HETATM 5 N N1' HFG . . . E 2 35.298 25.671 -11.723 0.61 20.2 ? N1' HFG 901 A 1 HETATM 6 C C6' HFG . . . E 2 34.107 25.944 -10.909 0.61 19.79 ? C6' HFG 901 A 1 HETATM 7 C C5' HFG . . . E 2 33.782 24.796 -9.981 0.61 19.23 ? C5' HFG 901 A 1 HETATM 8 C C4' HFG . . . E 2 34.998 24.434 -9.129 0.61 19.44 ? C4' HFG 901 A 1 HETATM 9 C C39 HFG . . . E 2 36.216 24.242 -10.009 0.61 19.6 ? C39 HFG 901 A 1 HETATM 10 O O7' HFG . . . E 2 37.37 23.969 -9.219 0.61 19.58 ? O7' HFG 901 A 1 HETATM 11 C C1' HFG . . . E 2 39.276 23.816 -12.917 0.61 21.1 ? C1' HFG 901 A 1 HETATM 12 N N3 HFG . . . E 2 39.297 22.896 -14.057 0.61 21.3 ? N3 HFG 901 A 1 HETATM 13 C C4 HFG . . . E 2 39.188 23.442 -15.324 0.61 21.83 ? C4 HFG 901 A 1 HETATM 14 O O11 HFG . . . E 2 39.153 24.642 -15.507 0.61 23.47 ? O11 HFG 901 A 1 HETATM 15 C C10 HFG . . . E 2 39.121 22.434 -16.388 0.61 22.02 ? C10 HFG 901 A 1 HETATM 16 C C5 HFG . . . E 2 39.029 22.831 -17.715 0.61 22.59 ? C5 HFG 901 A 1 HETATM 17 C C2 HFG . . . E 2 39.357 21.555 -13.835 0.61 20.97 ? C2 HFG 901 A 1 HETATM 18 N N1 HFG . . . E 2 39.293 20.641 -14.741 0.61 21.12 ? N1 HFG 901 A 1 HETATM 19 C C9 HFG . . . E 2 39.159 21.082 -16.053 0.61 21.65 ? C9 HFG 901 A 1 HETATM 20 C C8 HFG . . . E 2 39.053 20.122 -17.061 0.61 21.87 ? C8 HFG 901 A 1 HETATM 21 C C7 HFG . . . E 2 38.936 20.527 -18.379 0.61 69.2 ? C7 HFG 901 A 1 HETATM 22 BR BR1 HFG . . . E 2 38.616 19.197 -19.697 0.61 64.97 ? BR1 HFG 901 A 1 HETATM 23 C C6 HFG . . . E 2 38.969 21.874 -18.708 0.61 22.81 ? C6 HFG 901 A 1 HETATM 24 CL CL1 HFG . . . E 2 39.073 22.397 -20.359 0.61 39.64 ? CL1 HFG 901 A 1 # _model_server_stats.io_time_ms 155 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 221 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 24 #