data_7F9U # _model_server_result.job_id UtuciTiNNCWAuoj1cToLYg _model_server_result.datetime_utc '2024-10-25 20:26:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7f9u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":902}' # _entry.id 7F9U # _exptl.entry_id 7F9U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 486.541 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[(3S)-3-cyano-3-(1-methylcyclopropyl)-2-oxidanylidene-pyrrolidin-1-yl]-N-[[3-fluoranyl-5-(1-methylpyrazol-4-yl)phenyl]methyl]-6-methyl-pyridine-2-carboxamide _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7F9U _cell.length_a 76.573 _cell.length_b 76.573 _cell.length_c 403.841 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7F9U _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,H,I,J,K,L,X,Y,Z,AA,DA 1 1 B,C,M,N,O,P,Q,R,S,T,U,V,W,BA,CA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 N N N ? 3 U N N ? 3 Y N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 176 A ASP 506 1_555 H CA CA . A CA 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? metalc ? metalc2 A OE2 GLU 304 A GLU 634 1_555 P CA CA . B CA 904 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 3.044 ? metalc ? metalc3 I CA CA . A CA 905 1_555 B OE1 GLU 404 B GLU 734 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.134 ? metalc ? metalc4 B OD1 ASP 176 B ASP 506 1_555 P CA CA . B CA 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc5 P CA CA . B CA 904 1_555 BA O HOH . B HOH 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? # _chem_comp.formula 'C27 H27 F N6 O2' _chem_comp.formula_weight 486.541 _chem_comp.id 1TI _chem_comp.mon_nstd_flag . _chem_comp.name 4-[(3S)-3-cyano-3-(1-methylcyclopropyl)-2-oxidanylidene-pyrrolidin-1-yl]-N-[[3-fluoranyl-5-(1-methylpyrazol-4-yl)phenyl]methyl]-6-methyl-pyridine-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C26 C25 1TI sing 1 n n C26 C23 1TI sing 2 n n C25 C23 1TI sing 3 n n C24 C23 1TI sing 4 n n C23 C20 1TI sing 5 n n C20 C19 1TI sing 6 n n C20 C21 1TI sing 7 n n C20 C22 1TI sing 8 n n C19 C18 1TI sing 9 n n C21 N5 1TI trip 10 n n C18 N4 1TI sing 11 n n C22 N4 1TI sing 12 n n C22 O1 1TI doub 13 n n N4 C3 1TI sing 14 n n C3 C4 1TI doub 15 n y C3 C2 1TI sing 16 n y C4 C5 1TI sing 17 n y O C6 1TI doub 18 n n C2 C1 1TI doub 19 n y C5 C6 1TI sing 20 n n C5 N 1TI doub 21 n y C6 N1 1TI sing 22 n n N1 C7 1TI sing 23 n n C7 C8 1TI sing 24 n n C1 N 1TI sing 25 n y C1 C 1TI sing 26 n n C8 C13 1TI doub 27 n y C8 C9 1TI sing 28 n y C13 C12 1TI sing 29 n y C9 C10 1TI doub 30 n y C17 C14 1TI doub 31 n y C17 N3 1TI sing 32 n y C12 C14 1TI sing 33 n n C12 C11 1TI doub 34 n y C10 C11 1TI sing 35 n y C10 F 1TI sing 36 n n C16 N3 1TI sing 37 n n C14 C15 1TI sing 38 n y N3 N2 1TI sing 39 n y C15 N2 1TI doub 40 n y C H1 1TI sing 41 n n C H2 1TI sing 42 n n C H3 1TI sing 43 n n C11 H4 1TI sing 44 n n C13 H5 1TI sing 45 n n C15 H6 1TI sing 46 n n C16 H7 1TI sing 47 n n C16 H8 1TI sing 48 n n C16 H9 1TI sing 49 n n C17 H10 1TI sing 50 n n C18 H11 1TI sing 51 n n C18 H12 1TI sing 52 n n C19 H13 1TI sing 53 n n C19 H14 1TI sing 54 n n C2 H15 1TI sing 55 n n C24 H16 1TI sing 56 n n C24 H17 1TI sing 57 n n C24 H18 1TI sing 58 n n C25 H19 1TI sing 59 n n C25 H20 1TI sing 60 n n C26 H21 1TI sing 61 n n C26 H22 1TI sing 62 n n C4 H23 1TI sing 63 n n C7 H24 1TI sing 64 n n C7 H25 1TI sing 65 n n C9 H26 1TI sing 66 n n N1 H27 1TI sing 67 n n # _atom_sites.entry_id 7F9U _atom_sites.fract_transf_matrix[1][1] 0.013059 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013059 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002476 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 HFG A 1 901 901 HFG HFG . F 3 1TI A 1 902 1001 1TI T35 . G 4 BR A 1 903 1101 BR BR . H 5 CA A 1 904 1102 CA CA . I 5 CA A 1 905 1103 CA CA . J 6 CL A 1 906 1104 CL CL . K 6 CL A 1 907 1105 CL CL . L 6 CL A 1 908 1106 CL CL . M 2 HFG B 1 901 901 HFG HFG . N 3 1TI B 1 902 1001 1TI T35 . O 4 BR B 1 903 1101 BR BR . P 5 CA B 1 904 1102 CA CA . Q 6 CL B 1 905 1103 CL CL . R 6 CL B 1 906 1104 CL CL . S 6 CL B 1 907 1105 CL CL . T 2 HFG C 1 901 901 HFG HFG . U 3 1TI C 1 902 1001 1TI T35 . V 6 CL C 1 903 1102 CL CL . W 6 CL C 1 904 1103 CL CL . X 2 HFG D 1 901 901 HFG HFG . Y 3 1TI D 1 902 1001 1TI T35 . Z 4 BR D 1 903 1101 BR BR . AA 7 HOH A 1 1001 32 HOH HOH . AA 7 HOH A 2 1002 54 HOH HOH . AA 7 HOH A 3 1003 5 HOH HOH . AA 7 HOH A 4 1004 35 HOH HOH . AA 7 HOH A 5 1005 52 HOH HOH . AA 7 HOH A 6 1006 50 HOH HOH . AA 7 HOH A 7 1007 42 HOH HOH . AA 7 HOH A 8 1008 14 HOH HOH . AA 7 HOH A 9 1009 10 HOH HOH . AA 7 HOH A 10 1010 28 HOH HOH . AA 7 HOH A 11 1011 36 HOH HOH . AA 7 HOH A 12 1012 24 HOH HOH . AA 7 HOH A 13 1013 37 HOH HOH . AA 7 HOH A 14 1014 25 HOH HOH . AA 7 HOH A 15 1015 1 HOH HOH . BA 7 HOH B 1 1001 19 HOH HOH . BA 7 HOH B 2 1002 46 HOH HOH . BA 7 HOH B 3 1003 7 HOH HOH . BA 7 HOH B 4 1004 6 HOH HOH . BA 7 HOH B 5 1005 17 HOH HOH . BA 7 HOH B 6 1006 30 HOH HOH . BA 7 HOH B 7 1007 18 HOH HOH . BA 7 HOH B 8 1008 39 HOH HOH . BA 7 HOH B 9 1009 26 HOH HOH . BA 7 HOH B 10 1010 27 HOH HOH . BA 7 HOH B 11 1011 31 HOH HOH . BA 7 HOH B 12 1012 15 HOH HOH . BA 7 HOH B 13 1013 20 HOH HOH . BA 7 HOH B 14 1014 13 HOH HOH . BA 7 HOH B 15 1015 2 HOH HOH . CA 7 HOH C 1 1001 47 HOH HOH . CA 7 HOH C 2 1002 3 HOH HOH . CA 7 HOH C 3 1003 9 HOH HOH . CA 7 HOH C 4 1004 41 HOH HOH . CA 7 HOH C 5 1005 4 HOH HOH . CA 7 HOH C 6 1006 51 HOH HOH . CA 7 HOH C 7 1007 22 HOH HOH . CA 7 HOH C 8 1008 33 HOH HOH . CA 7 HOH C 9 1009 11 HOH HOH . CA 7 HOH C 10 1010 29 HOH HOH . CA 7 HOH C 11 1011 38 HOH HOH . CA 7 HOH C 12 1012 53 HOH HOH . CA 7 HOH C 13 1013 34 HOH HOH . CA 7 HOH C 14 1014 16 HOH HOH . DA 7 HOH D 1 1001 43 HOH HOH . DA 7 HOH D 2 1002 21 HOH HOH . DA 7 HOH D 3 1003 45 HOH HOH . DA 7 HOH D 4 1004 8 HOH HOH . DA 7 HOH D 5 1005 44 HOH HOH . DA 7 HOH D 6 1006 12 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N 1TI . . . N 3 52.531 -3.706 42.149 1 26.71 ? N 1TI 902 B 1 HETATM 2 C C 1TI . . . N 3 51.985 -5.612 40.765 1 17.2 ? C 1TI 902 B 1 HETATM 3 O O 1TI . . . N 3 53.585 -0.86 43.994 1 29.52 ? O 1TI 902 B 1 HETATM 4 C C1 1TI . . . N 3 52.804 -4.387 41.019 1 26.79 ? C1 1TI 902 B 1 HETATM 5 C C10 1TI . . . N 3 48.139 -1.382 46.344 1 32.71 ? C10 1TI 902 B 1 HETATM 6 C C11 1TI . . . N 3 47.899 -0.199 45.708 1 19.95 ? C11 1TI 902 B 1 HETATM 7 C C12 1TI . . . N 3 48.984 0.488 45.177 1 26.9 ? C12 1TI 902 B 1 HETATM 8 C C13 1TI . . . N 3 50.261 -0.055 45.27 1 23.81 ? C13 1TI 902 B 1 HETATM 9 C C14 1TI . . . N 3 48.801 1.833 44.596 1 32.63 ? C14 1TI 902 B 1 HETATM 10 C C15 1TI . . . N 3 47.657 2.536 44.209 1 35.23 ? C15 1TI 902 B 1 HETATM 11 C C16 1TI . . . N 3 50.004 4.842 43.011 1 35.32 ? C16 1TI 902 B 1 HETATM 12 C C17 1TI . . . N 3 49.841 2.646 44.212 1 35.05 ? C17 1TI 902 B 1 HETATM 13 C C18 1TI . . . N 3 56.655 -1.481 40.207 1 18.16 ? C18 1TI 902 B 1 HETATM 14 C C19 1TI . . . N 3 57.65 -1.3 39.069 1 19.47 ? C19 1TI 902 B 1 HETATM 15 C C2 1TI . . . N 3 53.846 -4.023 40.172 1 17.38 ? C2 1TI 902 B 1 HETATM 16 C C20 1TI . . . N 3 57.698 -2.671 38.354 1 20.12 ? C20 1TI 902 B 1 HETATM 17 C C21 1TI . . . N 3 57.832 -2.479 36.891 1 21.75 ? C21 1TI 902 B 1 HETATM 18 C C22 1TI . . . N 3 56.337 -3.286 38.699 1 22.13 ? C22 1TI 902 B 1 HETATM 19 C C23 1TI . . . N 3 58.921 -3.503 38.869 1 17.65 ? C23 1TI 902 B 1 HETATM 20 C C24 1TI . . . N 3 58.851 -3.91 40.342 1 31.53 ? C24 1TI 902 B 1 HETATM 21 C C25 1TI . . . N 3 60.214 -3.128 38.287 1 17.77 ? C25 1TI 902 B 1 HETATM 22 C C26 1TI . . . N 3 59.573 -4.44 37.943 1 17.32 ? C26 1TI 902 B 1 HETATM 23 C C3 1TI . . . N 3 54.655 -2.943 40.523 1 21.62 ? C3 1TI 902 B 1 HETATM 24 C C4 1TI . . . N 3 54.377 -2.243 41.685 1 22.37 ? C4 1TI 902 B 1 HETATM 25 C C5 1TI . . . N 3 53.313 -2.662 42.465 1 25.43 ? C5 1TI 902 B 1 HETATM 26 C C6 1TI . . . N 3 53.03 -1.924 43.745 1 27.92 ? C6 1TI 902 B 1 HETATM 27 C C7 1TI . . . N 3 51.837 -1.915 45.878 1 23.77 ? C7 1TI 902 B 1 HETATM 28 C C8 1TI . . . N 3 50.47 -1.273 45.902 1 25.24 ? C8 1TI 902 B 1 HETATM 29 C C9 1TI . . . N 3 49.388 -1.932 46.476 1 29.79 ? C9 1TI 902 B 1 HETATM 30 F F 1TI . . . N 3 47.079 -2.078 46.826 1 35.65 ? F 1TI 902 B 1 HETATM 31 N N1 1TI . . . N 3 52.186 -2.515 44.594 1 19.09 ? N1 1TI 902 B 1 HETATM 32 N N2 1TI . . . N 3 47.948 3.693 43.619 1 36.03 ? N2 1TI 902 B 1 HETATM 33 N N3 1TI . . . N 3 49.305 3.717 43.637 1 35.51 ? N3 1TI 902 B 1 HETATM 34 N N4 1TI . . . N 3 55.821 -2.611 39.769 1 22.74 ? N4 1TI 902 B 1 HETATM 35 N N5 1TI . . . N 3 58.001 -2.358 35.769 1 18.05 ? N5 1TI 902 B 1 HETATM 36 O O1 1TI . . . N 3 55.785 -4.195 38.105 1 16.93 ? O1 1TI 902 B 1 # _model_server_stats.io_time_ms 36 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 36 #