data_7F9Y
#
_model_server_result.job_id            rAhKiX2rhv3MFvC_c-cdnQ 
_model_server_result.datetime_utc      '2025-08-01 05:50:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7f9y 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":101}' 
#
_entry.id    7F9Y 
#
_exptl.entry_id    7F9Y 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              144.211 
_entity.id                          7 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'OCTANOIC ACID (CAPRYLIC ACID)' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      7 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 F SG CYS 248 R CYS 116 1_555 F SG CYS 330 R CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
covale ? covale1 C OG SER 3 C SER 2 1_555 G C1 OCA . C OCA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.374 ? 
#
_chem_comp.formula           'C8 H16 O2' 
_chem_comp.formula_weight    144.211 
_chem_comp.id                OCA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'OCTANOIC ACID (CAPRYLIC ACID)' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 OCA sing 312 n n 
C1 O1 OCA doub 313 n n 
C1 O2 OCA sing 314 n n 
C2 C3 OCA sing 315 n n 
C2 H21 OCA sing 316 n n 
C2 H22 OCA sing 317 n n 
C3 C4 OCA sing 318 n n 
C3 H31 OCA sing 319 n n 
C3 H32 OCA sing 320 n n 
C4 C5 OCA sing 321 n n 
C4 H41 OCA sing 322 n n 
C4 H42 OCA sing 323 n n 
C5 C6 OCA sing 324 n n 
C5 H51 OCA sing 325 n n 
C5 H52 OCA sing 326 n n 
C6 C7 OCA sing 327 n n 
C6 H61 OCA sing 328 n n 
C6 H62 OCA sing 329 n n 
C7 C8 OCA sing 330 n n 
C7 H71 OCA sing 331 n n 
C7 H72 OCA sing 332 n n 
C8 H81 OCA sing 333 n n 
C8 H82 OCA sing 334 n n 
C8 H83 OCA sing 335 n n 
O2 HO2 OCA sing 336 n n 
#
_atom_sites.entry_id                     7F9Y 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 7 OCA C 1 101 101 OCA OCA . 
H 8 CLR R 1 601 601 CLR CLR . 
I 8 CLR R 1 602 602 CLR CLR . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 OCA . . . G 7 114.499 88.65 126.123 1 81.44 ? C1 OCA 101 C 1 
HETATM 2 C C2 OCA . . . G 7 113.554 89.849 126.165 1 81.44 ? C2 OCA 101 C 1 
HETATM 3 C C3 OCA . . . G 7 112.151 89.408 125.756 1 81.44 ? C3 OCA 101 C 1 
HETATM 4 C C4 OCA . . . G 7 111.193 90.59 125.886 1 81.44 ? C4 OCA 101 C 1 
HETATM 5 C C5 OCA . . . G 7 110.104 90.254 126.901 1 81.44 ? C5 OCA 101 C 1 
HETATM 6 C C6 OCA . . . G 7 109.405 91.539 127.339 1 81.44 ? C6 OCA 101 C 1 
HETATM 7 C C7 OCA . . . G 7 108.371 91.943 126.29 1 81.44 ? C7 OCA 101 C 1 
HETATM 8 C C8 OCA . . . G 7 108.056 93.43 126.433 1 81.44 ? C8 OCA 101 C 1 
HETATM 9 O O1 OCA . . . G 7 115.494 88.658 126.766 1 81.44 ? O1 OCA 101 C 1 
#
_model_server_stats.io_time_ms              50 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    19 
_model_server_stats.query_time_ms           902 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           9 
#