data_7FEE
#
_model_server_result.job_id            pefxOBbjinNgs6Sykob2uw 
_model_server_result.datetime_utc      '2025-07-30 17:10:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7fee 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1203}' 
#
_entry.id    7FEE 
#
_exptl.entry_id    7FEE 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              376.573 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-[(1R,2R,5R)-5-hydroxy-2-(3-hydroxypropyl)cyclohexyl]-5-(2-methyloctan-2-yl)phenol 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7FEE 
_cell.length_a            43.79 
_cell.length_b            74.33 
_cell.length_c            184.2 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7FEE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 2 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 57 A CYS 98 1_555 A SG CYS 66 A CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? 
disulf ? disulf2 A SG CYS 216 A CYS 257 1_555 A SG CYS 223 A CYS 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
#
_chem_comp.formula           'C24 H40 O3' 
_chem_comp.formula_weight    376.573 
_chem_comp.id                9GF 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-[(1R,2R,5R)-5-hydroxy-2-(3-hydroxypropyl)cyclohexyl]-5-(2-methyloctan-2-yl)phenol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
OAZ CAY 9GF sing 48 n n 
CAY CBA 9GF doub 49 n y 
CAY CAM 9GF sing 50 n y 
CBA CAJ 9GF sing 51 n y 
CAP OAQ 9GF sing 52 n n 
CAP CAO 9GF sing 53 n n 
CAP CAR 9GF sing 54 n n 
CAO CAN 9GF sing 55 n n 
CAN CAM 9GF sing 56 n n 
CAN CAT 9GF sing 57 n n 
CAI CAG 9GF sing 58 n n 
CAM CAL 9GF doub 59 n y 
CAR CAS 9GF sing 60 n n 
CAU CAT 9GF sing 61 n n 
CAU CAV 9GF sing 62 n n 
CAS CAT 9GF sing 63 n n 
CAJ CAG 9GF sing 64 n n 
CAJ CAK 9GF doub 65 n y 
CAG CAH 9GF sing 66 n n 
CAG CAF 9GF sing 67 n n 
CAL CAK 9GF sing 68 n y 
CAV CAW 9GF sing 69 n n 
CAW OAX 9GF sing 70 n n 
CAF CAE 9GF sing 71 n n 
CAE CAD 9GF sing 72 n n 
CAD CAC 9GF sing 73 n n 
CAC CAB 9GF sing 74 n n 
CAB CAA 9GF sing 75 n n 
CAA H1 9GF sing 76 n n 
CAA H2 9GF sing 77 n n 
CAA H3 9GF sing 78 n n 
CAB H4 9GF sing 79 n n 
CAB H5 9GF sing 80 n n 
CAC H6 9GF sing 81 n n 
CAC H7 9GF sing 82 n n 
CAD H8 9GF sing 83 n n 
CAD H9 9GF sing 84 n n 
CAE H10 9GF sing 85 n n 
CAE H11 9GF sing 86 n n 
CAF H12 9GF sing 87 n n 
CAF H13 9GF sing 88 n n 
CAH H14 9GF sing 89 n n 
CAH H15 9GF sing 90 n n 
CAH H16 9GF sing 91 n n 
CAI H17 9GF sing 92 n n 
CAI H18 9GF sing 93 n n 
CAI H19 9GF sing 94 n n 
CAK H20 9GF sing 95 n n 
CAL H21 9GF sing 96 n n 
CAN H22 9GF sing 97 n n 
CAO H23 9GF sing 98 n n 
CAO H24 9GF sing 99 n n 
CAP H25 9GF sing 100 n n 
CAR H26 9GF sing 101 n n 
CAR H27 9GF sing 102 n n 
CAS H28 9GF sing 103 n n 
CAS H29 9GF sing 104 n n 
CAT H30 9GF sing 105 n n 
CAU H31 9GF sing 106 n n 
CAU H32 9GF sing 107 n n 
CAV H33 9GF sing 108 n n 
CAV H34 9GF sing 109 n n 
CAW H35 9GF sing 110 n n 
CAW H36 9GF sing 111 n n 
CBA H37 9GF sing 112 n n 
OAQ H38 9GF sing 113 n n 
OAX H39 9GF sing 114 n n 
OAZ H40 9GF sing 115 n n 
#
_atom_sites.entry_id                     7FEE 
_atom_sites.fract_transf_matrix[1][1]    0.022836 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013454 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005429 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CLR A 1 1201 1 CLR CLR . 
C 2 CLR A 1 1202 2 CLR CLR . 
D 3 9GF A 1 1203 1 9GF CP5 . 
E 4 7IC A 1 1204 1 7IC ZCZ . 
F 5 PEG A 1 1205 2 PEG PEG . 
G 5 PEG A 1 1206 3 PEG PEG . 
H 6 GOL A 1 1207 2 GOL GOL . 
I 6 GOL A 1 1208 3 GOL GOL . 
J 6 GOL A 1 1209 4 GOL GOL . 
K 6 GOL A 1 1210 6 GOL GOL . 
L 7 OLC A 1 1211 1 OLC OLC . 
M 7 OLC A 1 1212 2 OLC OLC . 
N 8 OLA A 1 1213 1 OLA OLA . 
O 8 OLA A 1 1214 2 OLA OLA . 
P 8 OLA A 1 1215 3 OLA OLA . 
Q 8 OLA A 1 1216 4 OLA OLA . 
R 9 HOH A 1 1301 40 HOH HOH . 
R 9 HOH A 2 1302 43 HOH HOH . 
R 9 HOH A 3 1303 42 HOH HOH . 
R 9 HOH A 4 1304 29 HOH HOH . 
R 9 HOH A 5 1305 41 HOH HOH . 
R 9 HOH A 6 1306 31 HOH HOH . 
R 9 HOH A 7 1307 39 HOH HOH . 
R 9 HOH A 8 1308 24 HOH HOH . 
R 9 HOH A 9 1309 25 HOH HOH . 
R 9 HOH A 10 1310 36 HOH HOH . 
R 9 HOH A 11 1311 1 HOH HOH . 
R 9 HOH A 12 1312 3 HOH HOH . 
R 9 HOH A 13 1313 22 HOH HOH . 
R 9 HOH A 14 1314 44 HOH HOH . 
R 9 HOH A 15 1315 32 HOH HOH . 
R 9 HOH A 16 1316 2 HOH HOH . 
R 9 HOH A 17 1317 30 HOH HOH . 
R 9 HOH A 18 1318 23 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA 9GF . . . D 3 -0.524 22.959 -9.727 1 71.88 ? CAA 9GF 1203 A 1 
HETATM 2 C CAB 9GF . . . D 3 0.24 22.469 -8.497 1 71.15 ? CAB 9GF 1203 A 1 
HETATM 3 C CAC 9GF . . . D 3 0.295 20.944 -8.418 1 70.66 ? CAC 9GF 1203 A 1 
HETATM 4 C CAD 9GF . . . D 3 -0.389 20.398 -7.164 1 67.31 ? CAD 9GF 1203 A 1 
HETATM 5 C CAE 9GF . . . D 3 -0.387 18.869 -7.126 1 67.52 ? CAE 9GF 1203 A 1 
HETATM 6 C CAF 9GF . . . D 3 -1.794 18.283 -7.278 1 66.63 ? CAF 9GF 1203 A 1 
HETATM 7 C CAG 9GF . . . D 3 -1.832 16.814 -7.713 1 67.41 ? CAG 9GF 1203 A 1 
HETATM 8 C CAH 9GF . . . D 3 -2.424 15.972 -6.587 1 64.91 ? CAH 9GF 1203 A 1 
HETATM 9 C CAI 9GF . . . D 3 -0.434 16.3 -8.048 1 68.73 ? CAI 9GF 1203 A 1 
HETATM 10 C CAJ 9GF . . . D 3 -2.693 16.669 -8.967 1 69.55 ? CAJ 9GF 1203 A 1 
HETATM 11 C CAK 9GF . . . D 3 -3.51 17.708 -9.388 1 69.29 ? CAK 9GF 1203 A 1 
HETATM 12 C CAL 9GF . . . D 3 -4.279 17.566 -10.533 1 71.44 ? CAL 9GF 1203 A 1 
HETATM 13 C CAM 9GF . . . D 3 -4.239 16.38 -11.252 1 73.06 ? CAM 9GF 1203 A 1 
HETATM 14 C CAN 9GF . . . D 3 -5.077 16.18 -12.528 1 75.65 ? CAN 9GF 1203 A 1 
HETATM 15 C CAO 9GF . . . D 3 -4.15 16.416 -13.725 1 77.76 ? CAO 9GF 1203 A 1 
HETATM 16 C CAP 9GF . . . D 3 -4.886 16.29 -15.058 1 81.42 ? CAP 9GF 1203 A 1 
HETATM 17 C CAR 9GF . . . D 3 -6.098 17.229 -15.115 1 81.94 ? CAR 9GF 1203 A 1 
HETATM 18 C CAS 9GF . . . D 3 -7.034 17.045 -13.919 1 78.94 ? CAS 9GF 1203 A 1 
HETATM 19 C CAT 9GF . . . D 3 -6.316 17.096 -12.566 1 76.38 ? CAT 9GF 1203 A 1 
HETATM 20 C CAU 9GF . . . D 3 -7.339 16.657 -11.504 1 74.84 ? CAU 9GF 1203 A 1 
HETATM 21 C CAV 9GF . . . D 3 -8.325 17.773 -11.157 1 74.1 ? CAV 9GF 1203 A 1 
HETATM 22 C CAW 9GF . . . D 3 -7.724 18.785 -10.184 1 71.53 ? CAW 9GF 1203 A 1 
HETATM 23 C CAY 9GF . . . D 3 -3.419 15.346 -10.833 1 72.26 ? CAY 9GF 1203 A 1 
HETATM 24 C CBA 9GF . . . D 3 -2.648 15.491 -9.693 1 70.35 ? CBA 9GF 1203 A 1 
HETATM 25 O OAQ 9GF . . . D 3 -4.004 16.621 -16.104 1 84.94 ? OAQ 9GF 1203 A 1 
HETATM 26 O OAX 9GF . . . D 3 -8.755 19.574 -9.66 1 72.12 ? OAX 9GF 1203 A 1 
HETATM 27 O OAZ 9GF . . . D 3 -3.372 14.151 -11.566 1 74.5 ? OAZ 9GF 1203 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    19 
_model_server_stats.query_time_ms           275 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           27 
#