data_7FEE # _model_server_result.job_id AFkiPchwYpXEst3ROQHnVQ _model_server_result.datetime_utc '2025-07-30 17:15:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7fee # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1204}' # _entry.id 7FEE # _exptl.entry_id 7FEE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 362.445 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-methyl-3-[(1S)-2-nitro-1-thiophen-2-yl-ethyl]-2-phenyl-1H-indole _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7FEE _cell.length_a 43.79 _cell.length_b 74.33 _cell.length_c 184.2 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7FEE _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 2 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 57 A CYS 98 1_555 A SG CYS 66 A CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? disulf ? disulf2 A SG CYS 216 A CYS 257 1_555 A SG CYS 223 A CYS 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? # _chem_comp.formula 'C21 H18 N2 O2 S' _chem_comp.formula_weight 362.445 _chem_comp.id 7IC _chem_comp.mon_nstd_flag . _chem_comp.name 6-methyl-3-[(1S)-2-nitro-1-thiophen-2-yl-ethyl]-2-phenyl-1H-indole _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 7IC doub 1 n y C18 C19 7IC sing 2 n y C17 C16 7IC sing 3 n y C15 C13 7IC sing 4 n n C14 C13 7IC doub 5 n y C14 C9 7IC sing 6 n y N8 C9 7IC sing 7 n y N8 C7 7IC sing 8 n y C19 C20 7IC doub 9 n y C13 C12 7IC sing 10 n y C9 C10 7IC doub 11 n y C16 C7 7IC sing 12 n n C16 C21 7IC doub 13 n y C7 C6 7IC doub 14 n y C20 C21 7IC sing 15 n y C10 C6 7IC sing 16 n y C10 C11 7IC sing 17 n y C12 C11 7IC doub 18 n y C6 C5 7IC sing 19 n n O3 N2 7IC doub 20 n n O1 N2 7IC sing 21 n n C5 C22 7IC sing 22 n n C5 C4 7IC sing 23 n n N2 C4 7IC sing 24 n n C23 C22 7IC doub 25 n y C23 C24 7IC sing 26 n y C22 S26 7IC sing 27 n y C24 C25 7IC doub 28 n y S26 C25 7IC sing 29 n y C4 H1 7IC sing 30 n n C4 H2 7IC sing 31 n n C5 H3 7IC sing 32 n n C11 H5 7IC sing 33 n n C12 H6 7IC sing 34 n n C14 H7 7IC sing 35 n n C15 H8 7IC sing 36 n n C15 H9 7IC sing 37 n n C15 H10 7IC sing 38 n n C17 H11 7IC sing 39 n n C18 H12 7IC sing 40 n n C19 H13 7IC sing 41 n n C20 H14 7IC sing 42 n n C21 H15 7IC sing 43 n n C23 H16 7IC sing 44 n n C24 H17 7IC sing 45 n n C25 H18 7IC sing 46 n n N8 H4 7IC sing 47 n n # _atom_sites.entry_id 7FEE _atom_sites.fract_transf_matrix[1][1] 0.022836 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013454 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005429 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CLR A 1 1201 1 CLR CLR . C 2 CLR A 1 1202 2 CLR CLR . D 3 9GF A 1 1203 1 9GF CP5 . E 4 7IC A 1 1204 1 7IC ZCZ . F 5 PEG A 1 1205 2 PEG PEG . G 5 PEG A 1 1206 3 PEG PEG . H 6 GOL A 1 1207 2 GOL GOL . I 6 GOL A 1 1208 3 GOL GOL . J 6 GOL A 1 1209 4 GOL GOL . K 6 GOL A 1 1210 6 GOL GOL . L 7 OLC A 1 1211 1 OLC OLC . M 7 OLC A 1 1212 2 OLC OLC . N 8 OLA A 1 1213 1 OLA OLA . O 8 OLA A 1 1214 2 OLA OLA . P 8 OLA A 1 1215 3 OLA OLA . Q 8 OLA A 1 1216 4 OLA OLA . R 9 HOH A 1 1301 40 HOH HOH . R 9 HOH A 2 1302 43 HOH HOH . R 9 HOH A 3 1303 42 HOH HOH . R 9 HOH A 4 1304 29 HOH HOH . R 9 HOH A 5 1305 41 HOH HOH . R 9 HOH A 6 1306 31 HOH HOH . R 9 HOH A 7 1307 39 HOH HOH . R 9 HOH A 8 1308 24 HOH HOH . R 9 HOH A 9 1309 25 HOH HOH . R 9 HOH A 10 1310 36 HOH HOH . R 9 HOH A 11 1311 1 HOH HOH . R 9 HOH A 12 1312 3 HOH HOH . R 9 HOH A 13 1313 22 HOH HOH . R 9 HOH A 14 1314 44 HOH HOH . R 9 HOH A 15 1315 32 HOH HOH . R 9 HOH A 16 1316 2 HOH HOH . R 9 HOH A 17 1317 30 HOH HOH . R 9 HOH A 18 1318 23 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 7IC . . . E 4 -12.159 25.355 -2.613 1 76.37 ? C10 7IC 1204 A 1 HETATM 2 C C4 7IC . . . E 4 -12.299 27.01 0.058 1 77.53 ? C4 7IC 1204 A 1 HETATM 3 C C5 7IC . . . E 4 -11.018 26.934 -0.776 1 75.07 ? C5 7IC 1204 A 1 HETATM 4 C C6 7IC . . . E 4 -11.231 26.37 -2.192 1 74.77 ? C6 7IC 1204 A 1 HETATM 5 C C7 7IC . . . E 4 -10.536 26.731 -3.356 1 73.47 ? C7 7IC 1204 A 1 HETATM 6 C C9 7IC . . . E 4 -11.981 25.177 -3.96 1 75.95 ? C9 7IC 1204 A 1 HETATM 7 C C11 7IC . . . E 4 -13.143 24.572 -1.951 1 79.26 ? C11 7IC 1204 A 1 HETATM 8 C C12 7IC . . . E 4 -13.912 23.646 -2.652 1 82.28 ? C12 7IC 1204 A 1 HETATM 9 C C13 7IC . . . E 4 -13.719 23.475 -4.024 1 81.2 ? C13 7IC 1204 A 1 HETATM 10 C C14 7IC . . . E 4 -12.761 24.232 -4.681 1 77.95 ? C14 7IC 1204 A 1 HETATM 11 C C15 7IC . . . E 4 -14.557 22.462 -4.802 1 84.05 ? C15 7IC 1204 A 1 HETATM 12 C C16 7IC . . . E 4 -9.42 27.768 -3.544 1 71.45 ? C16 7IC 1204 A 1 HETATM 13 C C17 7IC . . . E 4 -9.331 28.418 -4.766 1 71.37 ? C17 7IC 1204 A 1 HETATM 14 C C18 7IC . . . E 4 -8.34 29.359 -4.994 1 70.94 ? C18 7IC 1204 A 1 HETATM 15 C C19 7IC . . . E 4 -7.423 29.653 -3.998 1 69.91 ? C19 7IC 1204 A 1 HETATM 16 C C20 7IC . . . E 4 -7.502 29.005 -2.777 1 68.95 ? C20 7IC 1204 A 1 HETATM 17 C C21 7IC . . . E 4 -8.492 28.062 -2.556 1 70.15 ? C21 7IC 1204 A 1 HETATM 18 C C22 7IC . . . E 4 -9.993 26.047 -0.067 1 73.74 ? C22 7IC 1204 A 1 HETATM 19 C C23 7IC . . . E 4 -9.563 24.77 -0.463 1 72.07 ? C23 7IC 1204 A 1 HETATM 20 C C24 7IC . . . E 4 -8.587 24.16 0.388 1 71.51 ? C24 7IC 1204 A 1 HETATM 21 C C25 7IC . . . E 4 -8.221 24.954 1.485 1 71.93 ? C25 7IC 1204 A 1 HETATM 22 N N2 7IC . . . E 4 -13.095 28.185 -0.256 1 79.27 ? N2 7IC 1204 A 1 HETATM 23 N N8 7IC . . . E 4 -11.005 26.019 -4.364 1 74.18 ? N8 7IC 1204 A 1 HETATM 24 O O1 7IC . . . E 4 -14.356 27.781 -0.722 1 82.48 -1 O1 7IC 1204 A 1 HETATM 25 O O3 7IC . . . E 4 -12.459 28.969 -1.232 1 77.82 ? O3 7IC 1204 A 1 HETATM 26 S S26 7IC . . . E 4 -9.127 26.374 1.348 1 73.63 ? S26 7IC 1204 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 253 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 26 #