data_7FF0 # _model_server_result.job_id '_KI-JyCsj9mfFHlqsi_XTQ' _model_server_result.datetime_utc '2025-03-12 23:03:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ff0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 7FF0 # _exptl.entry_id 7FF0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 329.206 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.374 _cell.angle_gamma 90 _cell.entry_id 7FF0 _cell.length_a 135.6 _cell.length_b 49.643 _cell.length_c 63.915 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7FF0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 H N N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 182 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 183 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id G _struct_conn.ptnr2_label_atom_id AU _struct_conn.ptnr2_label_comp_id AU _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id AU _struct_conn.ptnr2_auth_seq_id 305 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.686 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C10 H12 N5 O6 P' _chem_comp.formula_weight 329.206 _chem_comp.id CMP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'CYCLIC AMP;CAMP' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1P CMP doub 70 n n P O2P CMP sing 71 n n P O5' CMP sing 72 n n P O3' CMP sing 73 n n O2P HOP2 CMP sing 74 n n O5' C5' CMP sing 75 n n C5' C4' CMP sing 76 n n C5' "H5'1" CMP sing 77 n n C5' "H5'2" CMP sing 78 n n C4' O4' CMP sing 79 n n C4' C3' CMP sing 80 n n C4' H4' CMP sing 81 n n O4' C1' CMP sing 82 n n C3' O3' CMP sing 83 n n C3' C2' CMP sing 84 n n C3' H3' CMP sing 85 n n C2' O2' CMP sing 86 n n C2' C1' CMP sing 87 n n C2' H2' CMP sing 88 n n O2' HO2' CMP sing 89 n n C1' N9 CMP sing 90 n n C1' H1' CMP sing 91 n n N9 C8 CMP sing 92 n y N9 C4 CMP sing 93 n y C8 N7 CMP doub 94 n y C8 H8 CMP sing 95 n n N7 C5 CMP sing 96 n y C5 C6 CMP sing 97 n y C5 C4 CMP doub 98 n y C6 N6 CMP sing 99 n n C6 N1 CMP doub 100 n y N6 HN61 CMP sing 101 n n N6 HN62 CMP sing 102 n n N1 C2 CMP sing 103 n y C2 N3 CMP doub 104 n y C2 H2 CMP sing 105 n n N3 C4 CMP sing 106 n y # _atom_sites.entry_id 7FF0 _atom_sites.fract_transf_matrix[1][1] 0.007375 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00135 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020144 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015906 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CMP A 1 301 301 CMP CMP . D 3 SO4 A 1 302 1 SO4 SO4 . E 3 SO4 A 1 303 13 SO4 SO4 . F 3 SO4 A 1 304 16 SO4 SO4 . G 4 AU A 1 305 1 AU AU . H 2 CMP B 1 301 302 CMP CMP . I 3 SO4 B 1 302 14 SO4 SO4 . J 3 SO4 B 1 303 15 SO4 SO4 . K 5 HOH A 1 401 136 HOH HOH . K 5 HOH A 2 402 64 HOH HOH . K 5 HOH A 3 403 88 HOH HOH . K 5 HOH A 4 404 30 HOH HOH . K 5 HOH A 5 405 150 HOH HOH . K 5 HOH A 6 406 158 HOH HOH . K 5 HOH A 7 407 26 HOH HOH . K 5 HOH A 8 408 47 HOH HOH . K 5 HOH A 9 409 135 HOH HOH . K 5 HOH A 10 410 112 HOH HOH . K 5 HOH A 11 411 59 HOH HOH . K 5 HOH A 12 412 93 HOH HOH . K 5 HOH A 13 413 157 HOH HOH . K 5 HOH A 14 414 38 HOH HOH . K 5 HOH A 15 415 1 HOH HOH . K 5 HOH A 16 416 113 HOH HOH . K 5 HOH A 17 417 163 HOH HOH . K 5 HOH A 18 418 39 HOH HOH . K 5 HOH A 19 419 127 HOH HOH . K 5 HOH A 20 420 21 HOH HOH . K 5 HOH A 21 421 10 HOH HOH . K 5 HOH A 22 422 15 HOH HOH . K 5 HOH A 23 423 103 HOH HOH . K 5 HOH A 24 424 28 HOH HOH . K 5 HOH A 25 425 3 HOH HOH . K 5 HOH A 26 426 6 HOH HOH . K 5 HOH A 27 427 149 HOH HOH . K 5 HOH A 28 428 36 HOH HOH . K 5 HOH A 29 429 123 HOH HOH . K 5 HOH A 30 430 13 HOH HOH . K 5 HOH A 31 431 108 HOH HOH . K 5 HOH A 32 432 104 HOH HOH . K 5 HOH A 33 433 80 HOH HOH . K 5 HOH A 34 434 43 HOH HOH . K 5 HOH A 35 435 86 HOH HOH . K 5 HOH A 36 436 90 HOH HOH . K 5 HOH A 37 437 7 HOH HOH . K 5 HOH A 38 438 29 HOH HOH . K 5 HOH A 39 439 25 HOH HOH . K 5 HOH A 40 440 33 HOH HOH . K 5 HOH A 41 441 92 HOH HOH . K 5 HOH A 42 442 159 HOH HOH . K 5 HOH A 43 443 11 HOH HOH . K 5 HOH A 44 444 144 HOH HOH . K 5 HOH A 45 445 5 HOH HOH . K 5 HOH A 46 446 54 HOH HOH . K 5 HOH A 47 447 22 HOH HOH . K 5 HOH A 48 448 134 HOH HOH . K 5 HOH A 49 449 31 HOH HOH . K 5 HOH A 50 450 14 HOH HOH . K 5 HOH A 51 451 74 HOH HOH . K 5 HOH A 52 452 147 HOH HOH . K 5 HOH A 53 453 52 HOH HOH . K 5 HOH A 54 454 97 HOH HOH . K 5 HOH A 55 455 4 HOH HOH . K 5 HOH A 56 456 8 HOH HOH . K 5 HOH A 57 457 37 HOH HOH . K 5 HOH A 58 458 40 HOH HOH . K 5 HOH A 59 459 166 HOH HOH . K 5 HOH A 60 460 152 HOH HOH . K 5 HOH A 61 461 42 HOH HOH . K 5 HOH A 62 462 55 HOH HOH . K 5 HOH A 63 463 58 HOH HOH . K 5 HOH A 64 464 100 HOH HOH . K 5 HOH A 65 465 27 HOH HOH . K 5 HOH A 66 466 71 HOH HOH . K 5 HOH A 67 467 73 HOH HOH . K 5 HOH A 68 468 151 HOH HOH . K 5 HOH A 69 469 85 HOH HOH . K 5 HOH A 70 470 91 HOH HOH . K 5 HOH A 71 471 81 HOH HOH . K 5 HOH A 72 472 145 HOH HOH . K 5 HOH A 73 473 79 HOH HOH . K 5 HOH A 74 474 66 HOH HOH . K 5 HOH A 75 475 41 HOH HOH . K 5 HOH A 76 476 75 HOH HOH . K 5 HOH A 77 477 70 HOH HOH . K 5 HOH A 78 478 105 HOH HOH . K 5 HOH A 79 479 110 HOH HOH . K 5 HOH A 80 480 122 HOH HOH . K 5 HOH A 81 481 118 HOH HOH . K 5 HOH A 82 482 120 HOH HOH . K 5 HOH A 83 483 82 HOH HOH . K 5 HOH A 84 484 89 HOH HOH . K 5 HOH A 85 485 102 HOH HOH . K 5 HOH A 86 486 35 HOH HOH . K 5 HOH A 87 487 56 HOH HOH . K 5 HOH A 88 488 130 HOH HOH . K 5 HOH A 89 489 106 HOH HOH . K 5 HOH A 90 490 49 HOH HOH . K 5 HOH A 91 491 139 HOH HOH . K 5 HOH A 92 492 101 HOH HOH . K 5 HOH A 93 493 142 HOH HOH . K 5 HOH A 94 494 96 HOH HOH . K 5 HOH A 95 495 107 HOH HOH . K 5 HOH A 96 496 137 HOH HOH . K 5 HOH A 97 497 109 HOH HOH . K 5 HOH A 98 498 128 HOH HOH . K 5 HOH A 99 499 114 HOH HOH . K 5 HOH A 100 500 94 HOH HOH . L 5 HOH B 1 401 125 HOH HOH . L 5 HOH B 2 402 116 HOH HOH . L 5 HOH B 3 403 78 HOH HOH . L 5 HOH B 4 404 161 HOH HOH . L 5 HOH B 5 405 143 HOH HOH . L 5 HOH B 6 406 99 HOH HOH . L 5 HOH B 7 407 60 HOH HOH . L 5 HOH B 8 408 131 HOH HOH . L 5 HOH B 9 409 62 HOH HOH . L 5 HOH B 10 410 154 HOH HOH . L 5 HOH B 11 411 9 HOH HOH . L 5 HOH B 12 412 61 HOH HOH . L 5 HOH B 13 413 18 HOH HOH . L 5 HOH B 14 414 72 HOH HOH . L 5 HOH B 15 415 34 HOH HOH . L 5 HOH B 16 416 44 HOH HOH . L 5 HOH B 17 417 2 HOH HOH . L 5 HOH B 18 418 68 HOH HOH . L 5 HOH B 19 419 12 HOH HOH . L 5 HOH B 20 420 141 HOH HOH . L 5 HOH B 21 421 119 HOH HOH . L 5 HOH B 22 422 50 HOH HOH . L 5 HOH B 23 423 148 HOH HOH . L 5 HOH B 24 424 115 HOH HOH . L 5 HOH B 25 425 20 HOH HOH . L 5 HOH B 26 426 132 HOH HOH . L 5 HOH B 27 427 32 HOH HOH . L 5 HOH B 28 428 164 HOH HOH . L 5 HOH B 29 429 160 HOH HOH . L 5 HOH B 30 430 23 HOH HOH . L 5 HOH B 31 431 17 HOH HOH . L 5 HOH B 32 432 16 HOH HOH . L 5 HOH B 33 433 124 HOH HOH . L 5 HOH B 34 434 133 HOH HOH . L 5 HOH B 35 435 156 HOH HOH . L 5 HOH B 36 436 153 HOH HOH . L 5 HOH B 37 437 167 HOH HOH . L 5 HOH B 38 438 98 HOH HOH . L 5 HOH B 39 439 51 HOH HOH . L 5 HOH B 40 440 53 HOH HOH . L 5 HOH B 41 441 121 HOH HOH . L 5 HOH B 42 442 57 HOH HOH . L 5 HOH B 43 443 146 HOH HOH . L 5 HOH B 44 444 84 HOH HOH . L 5 HOH B 45 445 24 HOH HOH . L 5 HOH B 46 446 95 HOH HOH . L 5 HOH B 47 447 45 HOH HOH . L 5 HOH B 48 448 77 HOH HOH . L 5 HOH B 49 449 165 HOH HOH . L 5 HOH B 50 450 138 HOH HOH . L 5 HOH B 51 451 140 HOH HOH . L 5 HOH B 52 452 46 HOH HOH . L 5 HOH B 53 453 87 HOH HOH . L 5 HOH B 54 454 83 HOH HOH . L 5 HOH B 55 455 63 HOH HOH . L 5 HOH B 56 456 129 HOH HOH . L 5 HOH B 57 457 126 HOH HOH . L 5 HOH B 58 458 48 HOH HOH . L 5 HOH B 59 459 69 HOH HOH . L 5 HOH B 60 460 19 HOH HOH . L 5 HOH B 61 461 117 HOH HOH . L 5 HOH B 62 462 76 HOH HOH . L 5 HOH B 63 463 111 HOH HOH . L 5 HOH B 64 464 67 HOH HOH . L 5 HOH B 65 465 155 HOH HOH . L 5 HOH B 66 466 65 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P CMP . . . C 2 145.683 17.631 81.981 1 18.97 ? P CMP 301 A 1 HETATM 2 O O1P CMP . . . C 2 146.974 17.012 81.515 1 17.88 ? O1P CMP 301 A 1 HETATM 3 O O2P CMP . . . C 2 145.744 18.533 83.182 1 10.85 ? O2P CMP 301 A 1 HETATM 4 O O5' CMP . . . C 2 144.66 16.474 82.416 1 14.09 ? O5' CMP 301 A 1 HETATM 5 C C5' CMP . . . C 2 143.254 16.696 82.457 1 17.21 ? C5' CMP 301 A 1 HETATM 6 C C4' CMP . . . C 2 142.857 17.454 81.224 1 16.88 ? C4' CMP 301 A 1 HETATM 7 O O4' CMP . . . C 2 141.499 17.939 81.224 1 15.65 ? O4' CMP 301 A 1 HETATM 8 C C3' CMP . . . C 2 143.658 18.712 80.979 1 16.08 ? C3' CMP 301 A 1 HETATM 9 O O3' CMP . . . C 2 145.018 18.422 80.734 1 15.35 ? O3' CMP 301 A 1 HETATM 10 C C2' CMP . . . C 2 142.849 19.383 79.88 1 19.94 ? C2' CMP 301 A 1 HETATM 11 O O2' CMP . . . C 2 143.039 18.77 78.611 1 14.12 ? O2' CMP 301 A 1 HETATM 12 C C1' CMP . . . C 2 141.422 19.064 80.36 1 19.78 ? C1' CMP 301 A 1 HETATM 13 N N9 CMP . . . C 2 140.79 20.163 81.106 1 20.15 ? N9 CMP 301 A 1 HETATM 14 C C8 CMP . . . C 2 140.986 20.487 82.401 1 19.76 ? C8 CMP 301 A 1 HETATM 15 N N7 CMP . . . C 2 140.212 21.545 82.744 1 15.18 ? N7 CMP 301 A 1 HETATM 16 C C5 CMP . . . C 2 139.529 21.909 81.642 1 14.93 ? C5 CMP 301 A 1 HETATM 17 C C6 CMP . . . C 2 138.538 22.945 81.282 1 18.09 ? C6 CMP 301 A 1 HETATM 18 N N6 CMP . . . C 2 138.12 23.835 82.202 1 15.7 ? N6 CMP 301 A 1 HETATM 19 N N1 CMP . . . C 2 138.067 22.978 80.022 1 14.53 ? N1 CMP 301 A 1 HETATM 20 C C2 CMP . . . C 2 138.459 22.101 79.093 1 17.42 ? C2 CMP 301 A 1 HETATM 21 N N3 CMP . . . C 2 139.347 21.133 79.35 1 15.82 ? N3 CMP 301 A 1 HETATM 22 C C4 CMP . . . C 2 139.906 20.992 80.573 1 15.37 ? C4 CMP 301 A 1 HETATM 23 H "H5'1" CMP . . . C 2 142.99 17.267 83.35 1 16 ? "H5'1" CMP 301 A 1 HETATM 24 H "H5'2" CMP . . . C 2 142.724 15.743 82.499 1 16 ? "H5'2" CMP 301 A 1 HETATM 25 H H4' CMP . . . C 2 142.931 16.742 80.391 1 15.67 ? H4' CMP 301 A 1 HETATM 26 H H3' CMP . . . C 2 143.617 19.404 81.832 1 14.87 ? H3' CMP 301 A 1 HETATM 27 H H2' CMP . . . C 2 143.056 20.462 79.842 1 18.73 ? H2' CMP 301 A 1 HETATM 28 H HO2' CMP . . . C 2 143.053 19.449 77.923 1 12.91 ? HO2' CMP 301 A 1 HETATM 29 H H1' CMP . . . C 2 140.82 18.835 79.47 1 18.57 ? H1' CMP 301 A 1 HETATM 30 H H8 CMP . . . C 2 141.665 19.974 83.07 1 18.55 ? H8 CMP 301 A 1 HETATM 31 H HN61 CMP . . . C 2 137.445 24.534 81.962 1 14.49 ? HN61 CMP 301 A 1 HETATM 32 H HN62 CMP . . . C 2 138.487 23.789 83.131 1 14.49 ? HN62 CMP 301 A 1 HETATM 33 H H2 CMP . . . C 2 138.043 22.177 78.096 1 16.21 ? H2 CMP 301 A 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 337 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 33 #