data_7FFX # _model_server_result.job_id XdCkVnqI2FZaLOrcXC-IYg _model_server_result.datetime_utc '2024-11-19 10:45:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ffx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 7FFX # _exptl.entry_id 7FFX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 259.151 _entity.id 4 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7FFX _cell.length_a 54.691 _cell.length_b 69.979 _cell.length_c 33.614 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7FFX _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H14 N O8 P' _chem_comp.formula_weight 259.151 _chem_comp.id GLP _chem_comp.mon_nstd_flag n _chem_comp.name 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose _chem_comp.type 'd-saccharide, alpha linking' _chem_comp.pdbx_synonyms 'GLUCOSAMINE 6-PHOSPHATE;6-O-phosphono-alpha-D-glucosamine;2-amino-2-deoxy-6-O-phosphono-alpha-D-glucose;2-amino-2-deoxy-6-O-phosphono-D-glucose;2-amino-2-deoxy-6-O-phosphono-glucose' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 GLP sing 102 n n C1 O1 GLP sing 103 n n C1 O5 GLP sing 104 n n C1 H1 GLP sing 105 n n C2 C3 GLP sing 106 n n C2 N2 GLP sing 107 n n C2 H2 GLP sing 108 n n C3 C4 GLP sing 109 n n C3 O3 GLP sing 110 n n C3 H3 GLP sing 111 n n C4 C5 GLP sing 112 n n C4 O4 GLP sing 113 n n C4 H4 GLP sing 114 n n C5 C6 GLP sing 115 n n C5 O5 GLP sing 116 n n C5 H5 GLP sing 117 n n C6 O6 GLP sing 118 n n C6 H61 GLP sing 119 n n C6 H62 GLP sing 120 n n O1 HO1 GLP sing 121 n n N2 HN21 GLP sing 122 n n N2 HN22 GLP sing 123 n n O3 HO3 GLP sing 124 n n O4 HO4 GLP sing 125 n n O6 P GLP sing 126 n n P O1P GLP doub 127 n n P O2P GLP sing 128 n n P O3P GLP sing 129 n n O2P HOP2 GLP sing 130 n n O3P HOP3 GLP sing 131 n n # _pdbx_chem_comp_identifier.comp_id GLP _pdbx_chem_comp_identifier.identifier a-D-GlcpN6PO3 _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 7FFX _atom_sites.fract_transf_matrix[1][1] 0.018285 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01429 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02975 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 LNL A 1 201 200 LNL LLD . C 3 P6G A 1 202 201 P6G P6G . D 3 P6G A 1 203 202 P6G P6G . E 4 GLP A 1 204 210 GLP GLP . F 5 HOH A 1 301 2093 HOH HOH . F 5 HOH A 2 302 2058 HOH HOH . F 5 HOH A 3 303 1139 HOH HOH . F 5 HOH A 4 304 1149 HOH HOH . F 5 HOH A 5 305 1053 HOH HOH . F 5 HOH A 6 306 2045 HOH HOH . F 5 HOH A 7 307 2032 HOH HOH . F 5 HOH A 8 308 2006 HOH HOH . F 5 HOH A 9 309 2066 HOH HOH . F 5 HOH A 10 310 1134 HOH HOH . F 5 HOH A 11 311 4 HOH HOH . F 5 HOH A 12 312 2096 HOH HOH . F 5 HOH A 13 313 2025 HOH HOH . F 5 HOH A 14 314 1 HOH HOH . F 5 HOH A 15 315 1044 HOH HOH . F 5 HOH A 16 316 1099 HOH HOH . F 5 HOH A 17 317 1023 HOH HOH . F 5 HOH A 18 318 1073 HOH HOH . F 5 HOH A 19 319 1035 HOH HOH . F 5 HOH A 20 320 1086 HOH HOH . F 5 HOH A 21 321 1059 HOH HOH . F 5 HOH A 22 322 14 HOH HOH . F 5 HOH A 23 323 1006 HOH HOH . F 5 HOH A 24 324 1029 HOH HOH . F 5 HOH A 25 325 2105 HOH HOH . F 5 HOH A 26 326 1125 HOH HOH . F 5 HOH A 27 327 2069 HOH HOH . F 5 HOH A 28 328 1069 HOH HOH . F 5 HOH A 29 329 1014 HOH HOH . F 5 HOH A 30 330 1083 HOH HOH . F 5 HOH A 31 331 2051 HOH HOH . F 5 HOH A 32 332 1096 HOH HOH . F 5 HOH A 33 333 1011 HOH HOH . F 5 HOH A 34 334 1031 HOH HOH . F 5 HOH A 35 335 1085 HOH HOH . F 5 HOH A 36 336 1057 HOH HOH . F 5 HOH A 37 337 2010 HOH HOH . F 5 HOH A 38 338 1091 HOH HOH . F 5 HOH A 39 339 1061 HOH HOH . F 5 HOH A 40 340 1101 HOH HOH . F 5 HOH A 41 341 1117 HOH HOH . F 5 HOH A 42 342 1012 HOH HOH . F 5 HOH A 43 343 1008 HOH HOH . F 5 HOH A 44 344 1102 HOH HOH . F 5 HOH A 45 345 2109 HOH HOH . F 5 HOH A 46 346 1020 HOH HOH . F 5 HOH A 47 347 1115 HOH HOH . F 5 HOH A 48 348 1026 HOH HOH . F 5 HOH A 49 349 2033 HOH HOH . F 5 HOH A 50 350 1080 HOH HOH . F 5 HOH A 51 351 1001 HOH HOH . F 5 HOH A 52 352 1114 HOH HOH . F 5 HOH A 53 353 1052 HOH HOH . F 5 HOH A 54 354 2071 HOH HOH . F 5 HOH A 55 355 1124 HOH HOH . F 5 HOH A 56 356 1007 HOH HOH . F 5 HOH A 57 357 1087 HOH HOH . F 5 HOH A 58 358 1065 HOH HOH . F 5 HOH A 59 359 1048 HOH HOH . F 5 HOH A 60 360 1074 HOH HOH . F 5 HOH A 61 361 1107 HOH HOH . F 5 HOH A 62 362 1050 HOH HOH . F 5 HOH A 63 363 1032 HOH HOH . F 5 HOH A 64 364 1040 HOH HOH . F 5 HOH A 65 365 1106 HOH HOH . F 5 HOH A 66 366 2077 HOH HOH . F 5 HOH A 67 367 1064 HOH HOH . F 5 HOH A 68 368 1127 HOH HOH . F 5 HOH A 69 369 1094 HOH HOH . F 5 HOH A 70 370 6 HOH HOH . F 5 HOH A 71 371 1034 HOH HOH . F 5 HOH A 72 372 2024 HOH HOH . F 5 HOH A 73 373 1022 HOH HOH . F 5 HOH A 74 374 1122 HOH HOH . F 5 HOH A 75 375 1081 HOH HOH . F 5 HOH A 76 376 2086 HOH HOH . F 5 HOH A 77 377 1077 HOH HOH . F 5 HOH A 78 378 1075 HOH HOH . F 5 HOH A 79 379 1016 HOH HOH . F 5 HOH A 80 380 1093 HOH HOH . F 5 HOH A 81 381 1104 HOH HOH . F 5 HOH A 82 382 1118 HOH HOH . F 5 HOH A 83 383 1028 HOH HOH . F 5 HOH A 84 384 1039 HOH HOH . F 5 HOH A 85 385 1042 HOH HOH . F 5 HOH A 86 386 1027 HOH HOH . F 5 HOH A 87 387 2065 HOH HOH . F 5 HOH A 88 388 1090 HOH HOH . F 5 HOH A 89 389 1002 HOH HOH . F 5 HOH A 90 390 2036 HOH HOH . F 5 HOH A 91 391 1079 HOH HOH . F 5 HOH A 92 392 1116 HOH HOH . F 5 HOH A 93 393 1119 HOH HOH . F 5 HOH A 94 394 2095 HOH HOH . F 5 HOH A 95 395 2052 HOH HOH . F 5 HOH A 96 396 2031 HOH HOH . F 5 HOH A 97 397 1089 HOH HOH . F 5 HOH A 98 398 1112 HOH HOH . F 5 HOH A 99 399 2076 HOH HOH . F 5 HOH A 100 400 1066 HOH HOH . F 5 HOH A 101 401 1070 HOH HOH . F 5 HOH A 102 402 1121 HOH HOH . F 5 HOH A 103 403 1128 HOH HOH . F 5 HOH A 104 404 2046 HOH HOH . F 5 HOH A 105 405 1063 HOH HOH . F 5 HOH A 106 406 1068 HOH HOH . F 5 HOH A 107 407 1082 HOH HOH . F 5 HOH A 108 408 1095 HOH HOH . F 5 HOH A 109 409 1043 HOH HOH . F 5 HOH A 110 410 2039 HOH HOH . F 5 HOH A 111 411 1142 HOH HOH . F 5 HOH A 112 412 2028 HOH HOH . F 5 HOH A 113 413 1060 HOH HOH . F 5 HOH A 114 414 1105 HOH HOH . F 5 HOH A 115 415 1110 HOH HOH . F 5 HOH A 116 416 1076 HOH HOH . F 5 HOH A 117 417 1084 HOH HOH . F 5 HOH A 118 418 1047 HOH HOH . F 5 HOH A 119 419 1103 HOH HOH . F 5 HOH A 120 420 1098 HOH HOH . F 5 HOH A 121 421 1072 HOH HOH . F 5 HOH A 122 422 1071 HOH HOH . F 5 HOH A 123 423 1056 HOH HOH . F 5 HOH A 124 424 1055 HOH HOH . F 5 HOH A 125 425 1003 HOH HOH . F 5 HOH A 126 426 1024 HOH HOH . F 5 HOH A 127 427 2072 HOH HOH . F 5 HOH A 128 428 1111 HOH HOH . F 5 HOH A 129 429 1051 HOH HOH . F 5 HOH A 130 430 1054 HOH HOH . F 5 HOH A 131 431 1045 HOH HOH . F 5 HOH A 132 432 1062 HOH HOH . F 5 HOH A 133 433 2055 HOH HOH . F 5 HOH A 134 434 1017 HOH HOH . F 5 HOH A 135 435 1100 HOH HOH . F 5 HOH A 136 436 1049 HOH HOH . F 5 HOH A 137 437 2097 HOH HOH . F 5 HOH A 138 438 1120 HOH HOH . F 5 HOH A 139 439 2003 HOH HOH . F 5 HOH A 140 440 2070 HOH HOH . F 5 HOH A 141 441 2050 HOH HOH . F 5 HOH A 142 442 2085 HOH HOH . F 5 HOH A 143 443 1038 HOH HOH . F 5 HOH A 144 444 1046 HOH HOH . F 5 HOH A 145 445 2100 HOH HOH . F 5 HOH A 146 446 2094 HOH HOH . F 5 HOH A 147 447 2012 HOH HOH . F 5 HOH A 148 448 1067 HOH HOH . F 5 HOH A 149 449 1041 HOH HOH . F 5 HOH A 150 450 2049 HOH HOH . F 5 HOH A 151 451 1123 HOH HOH . F 5 HOH A 152 452 2038 HOH HOH . F 5 HOH A 153 453 1009 HOH HOH . F 5 HOH A 154 454 1015 HOH HOH . F 5 HOH A 155 455 1097 HOH HOH . F 5 HOH A 156 456 2013 HOH HOH . F 5 HOH A 157 457 1058 HOH HOH . F 5 HOH A 158 458 1005 HOH HOH . F 5 HOH A 159 459 2040 HOH HOH . F 5 HOH A 160 460 2091 HOH HOH . F 5 HOH A 161 461 1078 HOH HOH . F 5 HOH A 162 462 2004 HOH HOH . F 5 HOH A 163 463 2102 HOH HOH . F 5 HOH A 164 464 1132 HOH HOH . F 5 HOH A 165 465 2099 HOH HOH . F 5 HOH A 166 466 2060 HOH HOH . F 5 HOH A 167 467 2034 HOH HOH . F 5 HOH A 168 468 1108 HOH HOH . F 5 HOH A 169 469 1136 HOH HOH . F 5 HOH A 170 470 2092 HOH HOH . F 5 HOH A 171 471 2047 HOH HOH . F 5 HOH A 172 472 2098 HOH HOH . F 5 HOH A 173 473 2084 HOH HOH . F 5 HOH A 174 474 1010 HOH HOH . F 5 HOH A 175 475 19 HOH HOH . F 5 HOH A 176 476 8 HOH HOH . F 5 HOH A 177 477 1109 HOH HOH . F 5 HOH A 178 478 10 HOH HOH . F 5 HOH A 179 479 2087 HOH HOH . F 5 HOH A 180 480 2048 HOH HOH . F 5 HOH A 181 481 7 HOH HOH . F 5 HOH A 182 482 17 HOH HOH . F 5 HOH A 183 483 2056 HOH HOH . F 5 HOH A 184 484 1013 HOH HOH . F 5 HOH A 185 485 2008 HOH HOH . F 5 HOH A 186 486 1025 HOH HOH . F 5 HOH A 187 487 5 HOH HOH . F 5 HOH A 188 488 2053 HOH HOH . F 5 HOH A 189 489 2016 HOH HOH . F 5 HOH A 190 490 2042 HOH HOH . F 5 HOH A 191 491 18 HOH HOH . F 5 HOH A 192 492 2037 HOH HOH . F 5 HOH A 193 493 1130 HOH HOH . F 5 HOH A 194 494 2074 HOH HOH . F 5 HOH A 195 495 2061 HOH HOH . F 5 HOH A 196 496 1133 HOH HOH . F 5 HOH A 197 497 2081 HOH HOH . F 5 HOH A 198 498 2090 HOH HOH . F 5 HOH A 199 499 2002 HOH HOH . F 5 HOH A 200 500 2057 HOH HOH . F 5 HOH A 201 501 2009 HOH HOH . F 5 HOH A 202 502 1131 HOH HOH . F 5 HOH A 203 503 11 HOH HOH . F 5 HOH A 204 504 2043 HOH HOH . F 5 HOH A 205 505 2108 HOH HOH . F 5 HOH A 206 506 12 HOH HOH . F 5 HOH A 207 507 9 HOH HOH . F 5 HOH A 208 508 16 HOH HOH . F 5 HOH A 209 509 13 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GLP . . . E 4 19.548 -24.461 -1.87 0.44 8.79 ? C1 GLP 204 A 1 HETATM 2 C C2 GLP . . . E 4 19.748 -23.913 -3.209 0.7 7.51 ? C2 GLP 204 A 1 HETATM 3 C C3 GLP . . . E 4 18.587 -23.148 -3.626 0.44 6.68 ? C3 GLP 204 A 1 HETATM 4 C C4 GLP . . . E 4 17.333 -23.939 -3.608 0.44 7.13 ? C4 GLP 204 A 1 HETATM 5 C C5 GLP . . . E 4 17.108 -24.479 -2.235 0.6 5.83 ? C5 GLP 204 A 1 HETATM 6 C C6 GLP . . . E 4 15.799 -25.231 -2.119 0.44 7.08 ? C6 GLP 204 A 1 HETATM 7 O O1 GLP . . . E 4 19.575 -23.518 -0.832 0.44 25.71 ? O1 GLP 204 A 1 HETATM 8 N N2 GLP . . . E 4 20.949 -23.109 -3.14 0.25 16.67 ? N2 GLP 204 A 1 HETATM 9 O O3 GLP . . . E 4 18.938 -22.665 -4.895 0.2 13.35 ? O3 GLP 204 A 1 HETATM 10 O O4 GLP . . . E 4 16.392 -23.049 -3.62 0.2 9.58 ? O4 GLP 204 A 1 HETATM 11 O O5 GLP . . . E 4 18.298 -25.277 -1.823 0.44 9.38 ? O5 GLP 204 A 1 HETATM 12 O O6 GLP . . . E 4 14.959 -24.757 -0.997 0.2 7.38 ? O6 GLP 204 A 1 HETATM 13 P P GLP . . . E 4 15.447 -25.219 0.613 0.44 5.84 ? P GLP 204 A 1 HETATM 14 O O1P GLP . . . E 4 15.582 -26.717 0.516 0.44 10.9 ? O1P GLP 204 A 1 HETATM 15 O O2P GLP . . . E 4 14.501 -24.841 1.552 0.44 6.52 ? O2P GLP 204 A 1 HETATM 16 O O3P GLP . . . E 4 16.731 -24.587 0.855 0.44 6.28 ? O3P GLP 204 A 1 # _model_server_stats.io_time_ms 39 _model_server_stats.parse_time_ms 36 _model_server_stats.create_model_time_ms 35 _model_server_stats.query_time_ms 438 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 16 #