data_7FHS # _model_server_result.job_id zXMRbSwbx268TrXabVfCPA _model_server_result.datetime_utc '2024-11-27 01:39:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7fhs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":502}' # _entry.id 7FHS # _exptl.entry_id 7FHS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7FHS _cell.length_a 87.63 _cell.length_b 88.182 _cell.length_c 228.038 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7FHS _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,G,H,N 1 1 B,I,J,O 2 1 C,K,P 3 1 D,L,M,Q 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N ? 3 H N N ? 3 J N N ? 3 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLN 196 A GLN 320 1_555 A N PTR 197 A PTR 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale2 A C PTR 197 A PTR 321 1_555 A N ILE 198 A ILE 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale3 B C GLN 196 B GLN 320 1_555 B N PTR 197 B PTR 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale4 B C PTR 197 B PTR 321 1_555 B N ILE 198 B ILE 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale5 C C GLN 196 C GLN 320 1_555 C N PTR 197 C PTR 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale6 C C PTR 197 C PTR 321 1_555 C N ILE 198 C ILE 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale7 D C GLN 196 D GLN 320 1_555 D N PTR 197 D PTR 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale8 D C PTR 197 D PTR 321 1_555 D N ILE 198 D ILE 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 159 n n C1 C2 GOL sing 160 n n C1 H11 GOL sing 161 n n C1 H12 GOL sing 162 n n O1 HO1 GOL sing 163 n n C2 O2 GOL sing 164 n n C2 C3 GOL sing 165 n n C2 H2 GOL sing 166 n n O2 HO2 GOL sing 167 n n C3 O3 GOL sing 168 n n C3 H31 GOL sing 169 n n C3 H32 GOL sing 170 n n O3 HO3 GOL sing 171 n n # _atom_sites.entry_id 7FHS _atom_sites.fract_transf_matrix[1][1] 0.011412 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01134 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004385 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 4VZ A 1 501 2 4VZ 392 . F 3 GOL A 1 502 1 GOL GOL . G 3 GOL A 1 503 3 GOL GOL . H 3 GOL A 1 504 5 GOL GOL . I 2 4VZ B 1 501 1 4VZ 392 . J 3 GOL B 1 502 2 GOL GOL . K 2 4VZ C 1 501 3 4VZ 392 . L 2 4VZ D 1 501 4 4VZ 392 . M 3 GOL D 1 502 6 GOL GOL . N 4 HOH A 1 601 215 HOH HOH . N 4 HOH A 2 602 185 HOH HOH . N 4 HOH A 3 603 129 HOH HOH . N 4 HOH A 4 604 102 HOH HOH . N 4 HOH A 5 605 5 HOH HOH . N 4 HOH A 6 606 17 HOH HOH . N 4 HOH A 7 607 55 HOH HOH . N 4 HOH A 8 608 261 HOH HOH . N 4 HOH A 9 609 203 HOH HOH . N 4 HOH A 10 610 216 HOH HOH . N 4 HOH A 11 611 145 HOH HOH . N 4 HOH A 12 612 63 HOH HOH . N 4 HOH A 13 613 190 HOH HOH . N 4 HOH A 14 614 103 HOH HOH . N 4 HOH A 15 615 6 HOH HOH . N 4 HOH A 16 616 207 HOH HOH . N 4 HOH A 17 617 66 HOH HOH . N 4 HOH A 18 618 83 HOH HOH . N 4 HOH A 19 619 193 HOH HOH . N 4 HOH A 20 620 214 HOH HOH . N 4 HOH A 21 621 153 HOH HOH . N 4 HOH A 22 622 249 HOH HOH . N 4 HOH A 23 623 231 HOH HOH . N 4 HOH A 24 624 149 HOH HOH . N 4 HOH A 25 625 139 HOH HOH . N 4 HOH A 26 626 239 HOH HOH . N 4 HOH A 27 627 53 HOH HOH . N 4 HOH A 28 628 211 HOH HOH . N 4 HOH A 29 629 25 HOH HOH . N 4 HOH A 30 630 159 HOH HOH . N 4 HOH A 31 631 198 HOH HOH . N 4 HOH A 32 632 75 HOH HOH . N 4 HOH A 33 633 101 HOH HOH . N 4 HOH A 34 634 238 HOH HOH . N 4 HOH A 35 635 78 HOH HOH . N 4 HOH A 36 636 232 HOH HOH . N 4 HOH A 37 637 106 HOH HOH . N 4 HOH A 38 638 221 HOH HOH . N 4 HOH A 39 639 223 HOH HOH . N 4 HOH A 40 640 217 HOH HOH . N 4 HOH A 41 641 34 HOH HOH . N 4 HOH A 42 642 116 HOH HOH . N 4 HOH A 43 643 150 HOH HOH . N 4 HOH A 44 644 68 HOH HOH . N 4 HOH A 45 645 131 HOH HOH . N 4 HOH A 46 646 194 HOH HOH . N 4 HOH A 47 647 135 HOH HOH . N 4 HOH A 48 648 264 HOH HOH . N 4 HOH A 49 649 90 HOH HOH . N 4 HOH A 50 650 128 HOH HOH . N 4 HOH A 51 651 42 HOH HOH . N 4 HOH A 52 652 267 HOH HOH . N 4 HOH A 53 653 148 HOH HOH . N 4 HOH A 54 654 114 HOH HOH . N 4 HOH A 55 655 77 HOH HOH . N 4 HOH A 56 656 160 HOH HOH . N 4 HOH A 57 657 95 HOH HOH . N 4 HOH A 58 658 39 HOH HOH . N 4 HOH A 59 659 141 HOH HOH . N 4 HOH A 60 660 79 HOH HOH . N 4 HOH A 61 661 73 HOH HOH . N 4 HOH A 62 662 46 HOH HOH . N 4 HOH A 63 663 69 HOH HOH . N 4 HOH A 64 664 52 HOH HOH . N 4 HOH A 65 665 14 HOH HOH . N 4 HOH A 66 666 252 HOH HOH . N 4 HOH A 67 667 243 HOH HOH . N 4 HOH A 68 668 44 HOH HOH . N 4 HOH A 69 669 235 HOH HOH . N 4 HOH A 70 670 58 HOH HOH . N 4 HOH A 71 671 18 HOH HOH . N 4 HOH A 72 672 93 HOH HOH . N 4 HOH A 73 673 124 HOH HOH . N 4 HOH A 74 674 170 HOH HOH . N 4 HOH A 75 675 210 HOH HOH . N 4 HOH A 76 676 92 HOH HOH . N 4 HOH A 77 677 146 HOH HOH . N 4 HOH A 78 678 205 HOH HOH . N 4 HOH A 79 679 29 HOH HOH . N 4 HOH A 80 680 24 HOH HOH . N 4 HOH A 81 681 260 HOH HOH . N 4 HOH A 82 682 105 HOH HOH . N 4 HOH A 83 683 113 HOH HOH . N 4 HOH A 84 684 8 HOH HOH . N 4 HOH A 85 685 84 HOH HOH . N 4 HOH A 86 686 20 HOH HOH . N 4 HOH A 87 687 234 HOH HOH . N 4 HOH A 88 688 171 HOH HOH . N 4 HOH A 89 689 56 HOH HOH . N 4 HOH A 90 690 271 HOH HOH . N 4 HOH A 91 691 270 HOH HOH . N 4 HOH A 92 692 273 HOH HOH . N 4 HOH A 93 693 161 HOH HOH . N 4 HOH A 94 694 258 HOH HOH . N 4 HOH A 95 695 269 HOH HOH . N 4 HOH A 96 696 157 HOH HOH . N 4 HOH A 97 697 268 HOH HOH . O 4 HOH B 1 601 163 HOH HOH . O 4 HOH B 2 602 241 HOH HOH . O 4 HOH B 3 603 229 HOH HOH . O 4 HOH B 4 604 80 HOH HOH . O 4 HOH B 5 605 123 HOH HOH . O 4 HOH B 6 606 240 HOH HOH . O 4 HOH B 7 607 164 HOH HOH . O 4 HOH B 8 608 140 HOH HOH . O 4 HOH B 9 609 120 HOH HOH . O 4 HOH B 10 610 244 HOH HOH . O 4 HOH B 11 611 70 HOH HOH . O 4 HOH B 12 612 127 HOH HOH . O 4 HOH B 13 613 151 HOH HOH . O 4 HOH B 14 614 122 HOH HOH . O 4 HOH B 15 615 7 HOH HOH . O 4 HOH B 16 616 219 HOH HOH . O 4 HOH B 17 617 209 HOH HOH . O 4 HOH B 18 618 226 HOH HOH . O 4 HOH B 19 619 109 HOH HOH . O 4 HOH B 20 620 89 HOH HOH . O 4 HOH B 21 621 218 HOH HOH . O 4 HOH B 22 622 222 HOH HOH . O 4 HOH B 23 623 48 HOH HOH . O 4 HOH B 24 624 51 HOH HOH . O 4 HOH B 25 625 118 HOH HOH . O 4 HOH B 26 626 208 HOH HOH . O 4 HOH B 27 627 100 HOH HOH . O 4 HOH B 28 628 186 HOH HOH . O 4 HOH B 29 629 206 HOH HOH . O 4 HOH B 30 630 65 HOH HOH . O 4 HOH B 31 631 23 HOH HOH . O 4 HOH B 32 632 11 HOH HOH . O 4 HOH B 33 633 88 HOH HOH . O 4 HOH B 34 634 86 HOH HOH . O 4 HOH B 35 635 112 HOH HOH . O 4 HOH B 36 636 85 HOH HOH . O 4 HOH B 37 637 257 HOH HOH . O 4 HOH B 38 638 62 HOH HOH . O 4 HOH B 39 639 230 HOH HOH . O 4 HOH B 40 640 158 HOH HOH . O 4 HOH B 41 641 72 HOH HOH . O 4 HOH B 42 642 225 HOH HOH . O 4 HOH B 43 643 199 HOH HOH . O 4 HOH B 44 644 196 HOH HOH . O 4 HOH B 45 645 98 HOH HOH . O 4 HOH B 46 646 233 HOH HOH . O 4 HOH B 47 647 104 HOH HOH . O 4 HOH B 48 648 155 HOH HOH . O 4 HOH B 49 649 173 HOH HOH . O 4 HOH B 50 650 172 HOH HOH . O 4 HOH B 51 651 259 HOH HOH . O 4 HOH B 52 652 162 HOH HOH . P 4 HOH C 1 601 192 HOH HOH . P 4 HOH C 2 602 47 HOH HOH . P 4 HOH C 3 603 22 HOH HOH . P 4 HOH C 4 604 144 HOH HOH . P 4 HOH C 5 605 110 HOH HOH . P 4 HOH C 6 606 119 HOH HOH . P 4 HOH C 7 607 228 HOH HOH . P 4 HOH C 8 608 242 HOH HOH . P 4 HOH C 9 609 212 HOH HOH . P 4 HOH C 10 610 250 HOH HOH . P 4 HOH C 11 611 61 HOH HOH . P 4 HOH C 12 612 201 HOH HOH . P 4 HOH C 13 613 213 HOH HOH . P 4 HOH C 14 614 125 HOH HOH . P 4 HOH C 15 615 108 HOH HOH . P 4 HOH C 16 616 169 HOH HOH . P 4 HOH C 17 617 26 HOH HOH . P 4 HOH C 18 618 147 HOH HOH . P 4 HOH C 19 619 152 HOH HOH . P 4 HOH C 20 620 21 HOH HOH . P 4 HOH C 21 621 237 HOH HOH . P 4 HOH C 22 622 2 HOH HOH . P 4 HOH C 23 623 137 HOH HOH . P 4 HOH C 24 624 60 HOH HOH . P 4 HOH C 25 625 13 HOH HOH . P 4 HOH C 26 626 12 HOH HOH . P 4 HOH C 27 627 91 HOH HOH . P 4 HOH C 28 628 143 HOH HOH . P 4 HOH C 29 629 272 HOH HOH . P 4 HOH C 30 630 227 HOH HOH . P 4 HOH C 31 631 204 HOH HOH . P 4 HOH C 32 632 184 HOH HOH . P 4 HOH C 33 633 45 HOH HOH . P 4 HOH C 34 634 38 HOH HOH . P 4 HOH C 35 635 246 HOH HOH . P 4 HOH C 36 636 82 HOH HOH . P 4 HOH C 37 637 132 HOH HOH . P 4 HOH C 38 638 41 HOH HOH . P 4 HOH C 39 639 197 HOH HOH . P 4 HOH C 40 640 130 HOH HOH . P 4 HOH C 41 641 28 HOH HOH . P 4 HOH C 42 642 117 HOH HOH . P 4 HOH C 43 643 253 HOH HOH . P 4 HOH C 44 644 30 HOH HOH . P 4 HOH C 45 645 181 HOH HOH . P 4 HOH C 46 646 254 HOH HOH . P 4 HOH C 47 647 180 HOH HOH . P 4 HOH C 48 648 3 HOH HOH . P 4 HOH C 49 649 248 HOH HOH . P 4 HOH C 50 650 37 HOH HOH . P 4 HOH C 51 651 74 HOH HOH . P 4 HOH C 52 652 188 HOH HOH . P 4 HOH C 53 653 187 HOH HOH . P 4 HOH C 54 654 71 HOH HOH . P 4 HOH C 55 655 50 HOH HOH . P 4 HOH C 56 656 191 HOH HOH . P 4 HOH C 57 657 168 HOH HOH . P 4 HOH C 58 658 266 HOH HOH . P 4 HOH C 59 659 165 HOH HOH . P 4 HOH C 60 660 99 HOH HOH . Q 4 HOH D 1 601 115 HOH HOH . Q 4 HOH D 2 602 167 HOH HOH . Q 4 HOH D 3 603 96 HOH HOH . Q 4 HOH D 4 604 76 HOH HOH . Q 4 HOH D 5 605 195 HOH HOH . Q 4 HOH D 6 606 31 HOH HOH . Q 4 HOH D 7 607 32 HOH HOH . Q 4 HOH D 8 608 107 HOH HOH . Q 4 HOH D 9 609 247 HOH HOH . Q 4 HOH D 10 610 265 HOH HOH . Q 4 HOH D 11 611 245 HOH HOH . Q 4 HOH D 12 612 236 HOH HOH . Q 4 HOH D 13 613 81 HOH HOH . Q 4 HOH D 14 614 126 HOH HOH . Q 4 HOH D 15 615 87 HOH HOH . Q 4 HOH D 16 616 121 HOH HOH . Q 4 HOH D 17 617 57 HOH HOH . Q 4 HOH D 18 618 67 HOH HOH . Q 4 HOH D 19 619 255 HOH HOH . Q 4 HOH D 20 620 256 HOH HOH . Q 4 HOH D 21 621 16 HOH HOH . Q 4 HOH D 22 622 49 HOH HOH . Q 4 HOH D 23 623 138 HOH HOH . Q 4 HOH D 24 624 10 HOH HOH . Q 4 HOH D 25 625 134 HOH HOH . Q 4 HOH D 26 626 111 HOH HOH . Q 4 HOH D 27 627 36 HOH HOH . Q 4 HOH D 28 628 224 HOH HOH . Q 4 HOH D 29 629 263 HOH HOH . Q 4 HOH D 30 630 9 HOH HOH . Q 4 HOH D 31 631 136 HOH HOH . Q 4 HOH D 32 632 200 HOH HOH . Q 4 HOH D 33 633 94 HOH HOH . Q 4 HOH D 34 634 220 HOH HOH . Q 4 HOH D 35 635 156 HOH HOH . Q 4 HOH D 36 636 178 HOH HOH . Q 4 HOH D 37 637 189 HOH HOH . Q 4 HOH D 38 638 183 HOH HOH . Q 4 HOH D 39 639 54 HOH HOH . Q 4 HOH D 40 640 19 HOH HOH . Q 4 HOH D 41 641 59 HOH HOH . Q 4 HOH D 42 642 64 HOH HOH . Q 4 HOH D 43 643 142 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . M 3 43.495 -5.557 -30.882 1 67.91 ? C1 GOL 502 D 1 HETATM 2 O O1 GOL . . . M 3 43.888 -6.192 -29.67 1 64.87 ? O1 GOL 502 D 1 HETATM 3 C C2 GOL . . . M 3 42.961 -4.163 -30.635 1 71.2 ? C2 GOL 502 D 1 HETATM 4 O O2 GOL . . . M 3 43.913 -3.19 -31.064 1 70.42 ? O2 GOL 502 D 1 HETATM 5 C C3 GOL . . . M 3 41.621 -3.909 -31.291 1 74.34 ? C3 GOL 502 D 1 HETATM 6 O O3 GOL . . . M 3 41.051 -2.677 -30.859 1 78.24 ? O3 GOL 502 D 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #