data_7FK3 # _model_server_result.job_id vRJ46G4dPL6eTtxfYpx7aQ _model_server_result.datetime_utc '2024-11-24 21:22:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7fk3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":2101}' # _entry.id 7FK3 # _exptl.entry_id 7FK3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 243.28 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'methyl N-(benzenesulfonyl)-N-methylglycinate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.36 _cell.angle_gamma 90 _cell.entry_id 7FK3 _cell.length_a 88.446 _cell.length_b 81.75 _cell.length_c 93.372 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7FK3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H13 N O4 S' _chem_comp.formula_weight 243.28 _chem_comp.id VNC _chem_comp.mon_nstd_flag . _chem_comp.name 'methyl N-(benzenesulfonyl)-N-methylglycinate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C3 O1 VNC sing 376 n n O C2 VNC doub 377 n n O1 C2 VNC sing 378 n n C2 C1 VNC sing 379 n n C1 N VNC sing 380 n n C N VNC sing 381 n n N S VNC sing 382 n n O3 S VNC doub 383 n n S O2 VNC doub 384 n n S C4 VNC sing 385 n n C4 C5 VNC doub 386 n y C4 C9 VNC sing 387 n y C5 C6 VNC sing 388 n y C9 C8 VNC doub 389 n y C6 C7 VNC doub 390 n y C8 C7 VNC sing 391 n y C7 H1 VNC sing 392 n n C8 H2 VNC sing 393 n n C9 H3 VNC sing 394 n n C1 H4 VNC sing 395 n n C1 H5 VNC sing 396 n n C5 H6 VNC sing 397 n n C6 H7 VNC sing 398 n n C3 H8 VNC sing 399 n n C3 H9 VNC sing 400 n n C3 H10 VNC sing 401 n n C H11 VNC sing 402 n n C H12 VNC sing 403 n n C H13 VNC sing 404 n n # _atom_sites.entry_id 7FK3 _atom_sites.fract_transf_matrix[1][1] 0.011306 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003752 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012232 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011284 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 VNC A 1 2101 2101 VNC XXX . D 4 HOH A 1 2201 58 HOH HOH . D 4 HOH A 2 2202 88 HOH HOH . D 4 HOH A 3 2203 111 HOH HOH . D 4 HOH A 4 2204 115 HOH HOH . D 4 HOH A 5 2205 3 HOH HOH . D 4 HOH A 6 2206 83 HOH HOH . D 4 HOH A 7 2207 72 HOH HOH . D 4 HOH A 8 2208 100 HOH HOH . D 4 HOH A 9 2209 80 HOH HOH . D 4 HOH A 10 2210 34 HOH HOH . D 4 HOH A 11 2211 51 HOH HOH . D 4 HOH A 12 2212 23 HOH HOH . D 4 HOH A 13 2213 53 HOH HOH . D 4 HOH A 14 2214 45 HOH HOH . D 4 HOH A 15 2215 21 HOH HOH . D 4 HOH A 16 2216 10 HOH HOH . D 4 HOH A 17 2217 64 HOH HOH . D 4 HOH A 18 2218 94 HOH HOH . D 4 HOH A 19 2219 75 HOH HOH . D 4 HOH A 20 2220 7 HOH HOH . D 4 HOH A 21 2221 9 HOH HOH . D 4 HOH A 22 2222 79 HOH HOH . D 4 HOH A 23 2223 2 HOH HOH . D 4 HOH A 24 2224 49 HOH HOH . D 4 HOH A 25 2225 28 HOH HOH . D 4 HOH A 26 2226 12 HOH HOH . D 4 HOH A 27 2227 57 HOH HOH . D 4 HOH A 28 2228 87 HOH HOH . D 4 HOH A 29 2229 6 HOH HOH . D 4 HOH A 30 2230 17 HOH HOH . D 4 HOH A 31 2231 62 HOH HOH . D 4 HOH A 32 2232 20 HOH HOH . D 4 HOH A 33 2233 38 HOH HOH . D 4 HOH A 34 2234 29 HOH HOH . D 4 HOH A 35 2235 39 HOH HOH . D 4 HOH A 36 2236 59 HOH HOH . D 4 HOH A 37 2237 86 HOH HOH . D 4 HOH A 38 2238 35 HOH HOH . D 4 HOH A 39 2239 90 HOH HOH . D 4 HOH A 40 2240 33 HOH HOH . D 4 HOH A 41 2241 84 HOH HOH . D 4 HOH A 42 2242 48 HOH HOH . D 4 HOH A 43 2243 52 HOH HOH . D 4 HOH A 44 2244 104 HOH HOH . D 4 HOH A 45 2245 96 HOH HOH . D 4 HOH A 46 2246 4 HOH HOH . D 4 HOH A 47 2247 15 HOH HOH . D 4 HOH A 48 2248 55 HOH HOH . D 4 HOH A 49 2249 74 HOH HOH . D 4 HOH A 50 2250 95 HOH HOH . D 4 HOH A 51 2251 26 HOH HOH . D 4 HOH A 52 2252 81 HOH HOH . D 4 HOH A 53 2253 24 HOH HOH . D 4 HOH A 54 2254 102 HOH HOH . D 4 HOH A 55 2255 41 HOH HOH . D 4 HOH A 56 2256 98 HOH HOH . D 4 HOH A 57 2257 54 HOH HOH . D 4 HOH A 58 2258 71 HOH HOH . D 4 HOH A 59 2259 108 HOH HOH . D 4 HOH A 60 2260 105 HOH HOH . D 4 HOH A 61 2261 101 HOH HOH . D 4 HOH A 62 2262 85 HOH HOH . E 4 HOH B 1 401 107 HOH HOH . E 4 HOH B 2 402 109 HOH HOH . E 4 HOH B 3 403 50 HOH HOH . E 4 HOH B 4 404 65 HOH HOH . E 4 HOH B 5 405 113 HOH HOH . E 4 HOH B 6 406 42 HOH HOH . E 4 HOH B 7 407 112 HOH HOH . E 4 HOH B 8 408 27 HOH HOH . E 4 HOH B 9 409 69 HOH HOH . E 4 HOH B 10 410 67 HOH HOH . E 4 HOH B 11 411 11 HOH HOH . E 4 HOH B 12 412 44 HOH HOH . E 4 HOH B 13 413 73 HOH HOH . E 4 HOH B 14 414 76 HOH HOH . E 4 HOH B 15 415 82 HOH HOH . E 4 HOH B 16 416 93 HOH HOH . E 4 HOH B 17 417 78 HOH HOH . E 4 HOH B 18 418 63 HOH HOH . E 4 HOH B 19 419 99 HOH HOH . E 4 HOH B 20 420 18 HOH HOH . E 4 HOH B 21 421 8 HOH HOH . E 4 HOH B 22 422 114 HOH HOH . E 4 HOH B 23 423 19 HOH HOH . E 4 HOH B 24 424 68 HOH HOH . E 4 HOH B 25 425 97 HOH HOH . E 4 HOH B 26 426 89 HOH HOH . E 4 HOH B 27 427 22 HOH HOH . E 4 HOH B 28 428 103 HOH HOH . E 4 HOH B 29 429 56 HOH HOH . E 4 HOH B 30 430 5 HOH HOH . E 4 HOH B 31 431 70 HOH HOH . E 4 HOH B 32 432 30 HOH HOH . E 4 HOH B 33 433 60 HOH HOH . E 4 HOH B 34 434 66 HOH HOH . E 4 HOH B 35 435 36 HOH HOH . E 4 HOH B 36 436 40 HOH HOH . E 4 HOH B 37 437 13 HOH HOH . E 4 HOH B 38 438 31 HOH HOH . E 4 HOH B 39 439 14 HOH HOH . E 4 HOH B 40 440 32 HOH HOH . E 4 HOH B 41 441 77 HOH HOH . E 4 HOH B 42 442 16 HOH HOH . E 4 HOH B 43 443 25 HOH HOH . E 4 HOH B 44 444 61 HOH HOH . E 4 HOH B 45 445 37 HOH HOH . E 4 HOH B 46 446 92 HOH HOH . E 4 HOH B 47 447 43 HOH HOH . E 4 HOH B 48 448 47 HOH HOH . E 4 HOH B 49 449 91 HOH HOH . E 4 HOH B 50 450 110 HOH HOH . E 4 HOH B 51 451 106 HOH HOH . E 4 HOH B 52 452 46 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C7 VNC . . . C 3 29.043 14.02 42.689 0.42 20 0 C7 VNC 2101 A 1 HETATM 2 C C8 VNC . . . C 3 27.796 14.492 42.466 0.42 20 0 C8 VNC 2101 A 1 HETATM 3 C C9 VNC . . . C 3 27.676 15.669 41.873 0.42 20 0 C9 VNC 2101 A 1 HETATM 4 O O1 VNC . . . C 3 28.118 15.027 37.42 0.42 20 0 O1 VNC 2101 A 1 HETATM 5 C C1 VNC . . . C 3 29.373 16.412 38.615 0.42 20 0 C1 VNC 2101 A 1 HETATM 6 C C5 VNC . . . C 3 29.962 15.895 41.779 0.42 20 0 C5 VNC 2101 A 1 HETATM 7 C C6 VNC . . . C 3 30.135 14.742 42.343 0.42 20 0 C6 VNC 2101 A 1 HETATM 8 C C4 VNC . . . C 3 28.764 16.362 41.507 0.42 20 0 C4 VNC 2101 A 1 HETATM 9 C C3 VNC . . . C 3 27.73 14.121 36.783 0.42 20 0 C3 VNC 2101 A 1 HETATM 10 O O3 VNC . . . C 3 29.724 18.188 40.507 0.42 20 0 O3 VNC 2101 A 1 HETATM 11 C C2 VNC . . . C 3 29.288 15.358 37.762 0.42 20 0 C2 VNC 2101 A 1 HETATM 12 S S VNC . . . C 3 28.598 17.559 40.647 0.42 20 0 S VNC 2101 A 1 HETATM 13 O O2 VNC . . . C 3 27.549 18.229 40.901 0.42 20 0 O2 VNC 2101 A 1 HETATM 14 N N VNC . . . C 3 28.201 16.784 39.377 0.42 20 0 N VNC 2101 A 1 HETATM 15 O O VNC . . . C 3 30.207 14.82 37.313 0.42 20 0 O VNC 2101 A 1 HETATM 16 C C VNC . . . C 3 26.74 16.505 39.099 0.42 20 0 C VNC 2101 A 1 # _model_server_stats.io_time_ms 51 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 16 #