data_7FKM # _model_server_result.job_id kQvBUBGx9UX0L6-gSKdIQQ _model_server_result.datetime_utc '2024-10-11 01:22:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7fkm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 7FKM # _exptl.entry_id 7FKM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 265.641 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'methyl N-[3-chloro-4-(difluoromethoxy)phenyl]glycinate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.26 _cell.angle_gamma 90 _cell.entry_id 7FKM _cell.length_a 89.043 _cell.length_b 81.773 _cell.length_c 92.979 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7FKM _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H10 Cl F2 N O3' _chem_comp.formula_weight 265.641 _chem_comp.id W3B _chem_comp.mon_nstd_flag . _chem_comp.name 'methyl N-[3-chloro-4-(difluoromethoxy)phenyl]glycinate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F C9 W3B sing 376 n n O2 C9 W3B sing 377 n n O2 C6 W3B sing 378 n n C9 F1 W3B sing 379 n n C5 C6 W3B doub 380 n y C5 C4 W3B sing 381 n y C6 C7 W3B sing 382 n y O1 C1 W3B doub 383 n n CL C7 W3B sing 384 n n C7 C8 W3B doub 385 n y C4 C3 W3B doub 386 n y C3 C8 W3B sing 387 n y C3 N W3B sing 388 n n C1 O W3B sing 389 n n C1 C2 W3B sing 390 n n N C2 W3B sing 391 n n O C W3B sing 392 n n C8 H1 W3B sing 393 n n C9 H2 W3B sing 394 n n C5 H3 W3B sing 395 n n C4 H4 W3B sing 396 n n C2 H5 W3B sing 397 n n C2 H6 W3B sing 398 n n N H7 W3B sing 399 n n C H8 W3B sing 400 n n C H9 W3B sing 401 n n C H10 W3B sing 402 n n # _atom_sites.entry_id 7FKM _atom_sites.fract_transf_matrix[1][1] 0.011231 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003705 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012229 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011325 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 W3B B 1 401 401 W3B XXX . D 4 HOH A 1 2101 79 HOH HOH . D 4 HOH A 2 2102 133 HOH HOH . D 4 HOH A 3 2103 134 HOH HOH . D 4 HOH A 4 2104 2 HOH HOH . D 4 HOH A 5 2105 95 HOH HOH . D 4 HOH A 6 2106 78 HOH HOH . D 4 HOH A 7 2107 9 HOH HOH . D 4 HOH A 8 2108 120 HOH HOH . D 4 HOH A 9 2109 98 HOH HOH . D 4 HOH A 10 2110 37 HOH HOH . D 4 HOH A 11 2111 6 HOH HOH . D 4 HOH A 12 2112 131 HOH HOH . D 4 HOH A 13 2113 11 HOH HOH . D 4 HOH A 14 2114 92 HOH HOH . D 4 HOH A 15 2115 74 HOH HOH . D 4 HOH A 16 2116 26 HOH HOH . D 4 HOH A 17 2117 100 HOH HOH . D 4 HOH A 18 2118 18 HOH HOH . D 4 HOH A 19 2119 21 HOH HOH . D 4 HOH A 20 2120 50 HOH HOH . D 4 HOH A 21 2121 23 HOH HOH . D 4 HOH A 22 2122 89 HOH HOH . D 4 HOH A 23 2123 25 HOH HOH . D 4 HOH A 24 2124 41 HOH HOH . D 4 HOH A 25 2125 17 HOH HOH . D 4 HOH A 26 2126 47 HOH HOH . D 4 HOH A 27 2127 67 HOH HOH . D 4 HOH A 28 2128 123 HOH HOH . D 4 HOH A 29 2129 81 HOH HOH . D 4 HOH A 30 2130 110 HOH HOH . D 4 HOH A 31 2131 19 HOH HOH . D 4 HOH A 32 2132 88 HOH HOH . D 4 HOH A 33 2133 83 HOH HOH . D 4 HOH A 34 2134 102 HOH HOH . D 4 HOH A 35 2135 77 HOH HOH . D 4 HOH A 36 2136 116 HOH HOH . D 4 HOH A 37 2137 80 HOH HOH . D 4 HOH A 38 2138 36 HOH HOH . D 4 HOH A 39 2139 124 HOH HOH . D 4 HOH A 40 2140 56 HOH HOH . D 4 HOH A 41 2141 7 HOH HOH . D 4 HOH A 42 2142 86 HOH HOH . D 4 HOH A 43 2143 105 HOH HOH . D 4 HOH A 44 2144 87 HOH HOH . D 4 HOH A 45 2145 73 HOH HOH . D 4 HOH A 46 2146 66 HOH HOH . D 4 HOH A 47 2147 33 HOH HOH . D 4 HOH A 48 2148 4 HOH HOH . D 4 HOH A 49 2149 22 HOH HOH . D 4 HOH A 50 2150 70 HOH HOH . D 4 HOH A 51 2151 85 HOH HOH . D 4 HOH A 52 2152 49 HOH HOH . D 4 HOH A 53 2153 82 HOH HOH . D 4 HOH A 54 2154 35 HOH HOH . D 4 HOH A 55 2155 60 HOH HOH . D 4 HOH A 56 2156 109 HOH HOH . D 4 HOH A 57 2157 84 HOH HOH . D 4 HOH A 58 2158 51 HOH HOH . D 4 HOH A 59 2159 55 HOH HOH . D 4 HOH A 60 2160 114 HOH HOH . D 4 HOH A 61 2161 126 HOH HOH . D 4 HOH A 62 2162 125 HOH HOH . D 4 HOH A 63 2163 103 HOH HOH . D 4 HOH A 64 2164 127 HOH HOH . D 4 HOH A 65 2165 119 HOH HOH . E 4 HOH B 1 501 107 HOH HOH . E 4 HOH B 2 502 48 HOH HOH . E 4 HOH B 3 503 34 HOH HOH . E 4 HOH B 4 504 53 HOH HOH . E 4 HOH B 5 505 138 HOH HOH . E 4 HOH B 6 506 118 HOH HOH . E 4 HOH B 7 507 14 HOH HOH . E 4 HOH B 8 508 62 HOH HOH . E 4 HOH B 9 509 136 HOH HOH . E 4 HOH B 10 510 69 HOH HOH . E 4 HOH B 11 511 54 HOH HOH . E 4 HOH B 12 512 57 HOH HOH . E 4 HOH B 13 513 3 HOH HOH . E 4 HOH B 14 514 132 HOH HOH . E 4 HOH B 15 515 121 HOH HOH . E 4 HOH B 16 516 111 HOH HOH . E 4 HOH B 17 517 29 HOH HOH . E 4 HOH B 18 518 117 HOH HOH . E 4 HOH B 19 519 112 HOH HOH . E 4 HOH B 20 520 40 HOH HOH . E 4 HOH B 21 521 10 HOH HOH . E 4 HOH B 22 522 16 HOH HOH . E 4 HOH B 23 523 44 HOH HOH . E 4 HOH B 24 524 113 HOH HOH . E 4 HOH B 25 525 94 HOH HOH . E 4 HOH B 26 526 68 HOH HOH . E 4 HOH B 27 527 15 HOH HOH . E 4 HOH B 28 528 93 HOH HOH . E 4 HOH B 29 529 72 HOH HOH . E 4 HOH B 30 530 76 HOH HOH . E 4 HOH B 31 531 97 HOH HOH . E 4 HOH B 32 532 75 HOH HOH . E 4 HOH B 33 533 137 HOH HOH . E 4 HOH B 34 534 13 HOH HOH . E 4 HOH B 35 535 42 HOH HOH . E 4 HOH B 36 536 58 HOH HOH . E 4 HOH B 37 537 30 HOH HOH . E 4 HOH B 38 538 59 HOH HOH . E 4 HOH B 39 539 52 HOH HOH . E 4 HOH B 40 540 90 HOH HOH . E 4 HOH B 41 541 61 HOH HOH . E 4 HOH B 42 542 5 HOH HOH . E 4 HOH B 43 543 71 HOH HOH . E 4 HOH B 44 544 43 HOH HOH . E 4 HOH B 45 545 27 HOH HOH . E 4 HOH B 46 546 20 HOH HOH . E 4 HOH B 47 547 46 HOH HOH . E 4 HOH B 48 548 24 HOH HOH . E 4 HOH B 49 549 65 HOH HOH . E 4 HOH B 50 550 28 HOH HOH . E 4 HOH B 51 551 99 HOH HOH . E 4 HOH B 52 552 135 HOH HOH . E 4 HOH B 53 553 101 HOH HOH . E 4 HOH B 54 554 38 HOH HOH . E 4 HOH B 55 555 96 HOH HOH . E 4 HOH B 56 556 104 HOH HOH . E 4 HOH B 57 557 122 HOH HOH . E 4 HOH B 58 558 31 HOH HOH . E 4 HOH B 59 559 32 HOH HOH . E 4 HOH B 60 560 63 HOH HOH . E 4 HOH B 61 561 106 HOH HOH . E 4 HOH B 62 562 115 HOH HOH . E 4 HOH B 63 563 12 HOH HOH . E 4 HOH B 64 564 39 HOH HOH . E 4 HOH B 65 565 91 HOH HOH . E 4 HOH B 66 566 8 HOH HOH . E 4 HOH B 67 567 45 HOH HOH . E 4 HOH B 68 568 129 HOH HOH . E 4 HOH B 69 569 128 HOH HOH . E 4 HOH B 70 570 64 HOH HOH . E 4 HOH B 71 571 108 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C7 W3B . . . C 3 -1.646 12.45 -34.389 0.34 20 0 C7 W3B 401 B 1 HETATM 2 C C8 W3B . . . C 3 -2.837 12.812 -33.803 0.34 20 0 C8 W3B 401 B 1 HETATM 3 C C9 W3B . . . C 3 1.337 13.935 -35.539 0.34 20 0 C9 W3B 401 B 1 HETATM 4 O O1 W3B . . . C 3 -5.4 16.753 -34.545 0.34 20 0 O1 W3B 401 B 1 HETATM 5 C C1 W3B . . . C 3 -5.228 16.9 -33.363 0.34 20 0 C1 W3B 401 B 1 HETATM 6 C C5 W3B . . . C 3 -1.124 14.687 -34.953 0.34 20 0 C5 W3B 401 B 1 HETATM 7 C C6 W3B . . . C 3 -0.805 13.332 -34.953 0.34 20 0 C6 W3B 401 B 1 HETATM 8 C C4 W3B . . . C 3 -2.286 15.129 -34.383 0.34 20 0 C4 W3B 401 B 1 HETATM 9 C C3 W3B . . . C 3 -3.165 14.223 -33.806 0.34 20 0 C3 W3B 401 B 1 HETATM 10 C C2 W3B . . . C 3 -4.498 15.892 -32.496 0.34 20 0 C2 W3B 401 B 1 HETATM 11 F F1 W3B . . . C 3 2.225 13.211 -35.042 0.34 20 0 F1 W3B 401 B 1 HETATM 12 F F W3B . . . C 3 1.811 14.03 -36.733 0.34 20 0 F W3B 401 B 1 HETATM 13 O O2 W3B . . . C 3 0.323 12.979 -35.591 0.34 20 0 O2 W3B 401 B 1 HETATM 14 CL CL W3B . . . C 3 -1.183 10.866 -34.438 0.34 20 0 CL W3B 401 B 1 HETATM 15 N N W3B . . . C 3 -4.381 14.638 -33.244 0.34 20 0 N W3B 401 B 1 HETATM 16 O O W3B . . . C 3 -5.756 18.031 -32.891 0.34 20 0 O W3B 401 B 1 HETATM 17 C C W3B . . . C 3 -5.654 18.325 -31.525 0.34 20 0 C W3B 401 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 17 #