data_7FKP # _model_server_result.job_id f7cEqJvRt06zrBrzutX4bQ _model_server_result.datetime_utc '2024-10-19 11:40:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7fkp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":2101}' # _entry.id 7FKP # _exptl.entry_id 7FKP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 247.338 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'propyl (2S)-2-[(5-amino-1,3,4-thiadiazol-2-yl)sulfanyl]propanoate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.38 _cell.angle_gamma 90 _cell.entry_id 7FKP _cell.length_a 88.514 _cell.length_b 81.691 _cell.length_c 93.381 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7FKP _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H13 N3 O2 S2' _chem_comp.formula_weight 247.338 _chem_comp.id WBL _chem_comp.mon_nstd_flag . _chem_comp.name 'propyl (2S)-2-[(5-amino-1,3,4-thiadiazol-2-yl)sulfanyl]propanoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 N WBL sing 376 n y N1 C7 WBL doub 377 n y N C6 WBL doub 378 n y N2 C7 WBL sing 379 n n C7 S1 WBL sing 380 n y C6 S1 WBL sing 381 n y C6 S WBL sing 382 n n S C4 WBL sing 383 n n C4 C5 WBL sing 384 n n C4 C3 WBL sing 385 n n O1 C3 WBL doub 386 n n C3 O WBL sing 387 n n O C2 WBL sing 388 n n C1 C2 WBL sing 389 n n C1 C WBL sing 390 n n N2 H1 WBL sing 391 n n N2 H2 WBL sing 392 n n C1 H3 WBL sing 393 n n C1 H4 WBL sing 394 n n C5 H5 WBL sing 395 n n C5 H6 WBL sing 396 n n C5 H7 WBL sing 397 n n C4 H8 WBL sing 398 n n C2 H9 WBL sing 399 n n C2 H10 WBL sing 400 n n C H11 WBL sing 401 n n C H12 WBL sing 402 n n C H13 WBL sing 403 n n # _atom_sites.entry_id 7FKP _atom_sites.fract_transf_matrix[1][1] 0.011298 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003754 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012241 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011284 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 WBL A 1 2101 2101 WBL XXX . D 4 HOH A 1 2201 87 HOH HOH . D 4 HOH A 2 2202 131 HOH HOH . D 4 HOH A 3 2203 78 HOH HOH . D 4 HOH A 4 2204 82 HOH HOH . D 4 HOH A 5 2205 95 HOH HOH . D 4 HOH A 6 2206 2 HOH HOH . D 4 HOH A 7 2207 18 HOH HOH . D 4 HOH A 8 2208 69 HOH HOH . D 4 HOH A 9 2209 54 HOH HOH . D 4 HOH A 10 2210 15 HOH HOH . D 4 HOH A 11 2211 127 HOH HOH . D 4 HOH A 12 2212 36 HOH HOH . D 4 HOH A 13 2213 57 HOH HOH . D 4 HOH A 14 2214 104 HOH HOH . D 4 HOH A 15 2215 17 HOH HOH . D 4 HOH A 16 2216 6 HOH HOH . D 4 HOH A 17 2217 8 HOH HOH . D 4 HOH A 18 2218 14 HOH HOH . D 4 HOH A 19 2219 136 HOH HOH . D 4 HOH A 20 2220 107 HOH HOH . D 4 HOH A 21 2221 28 HOH HOH . D 4 HOH A 22 2222 129 HOH HOH . D 4 HOH A 23 2223 16 HOH HOH . D 4 HOH A 24 2224 72 HOH HOH . D 4 HOH A 25 2225 21 HOH HOH . D 4 HOH A 26 2226 83 HOH HOH . D 4 HOH A 27 2227 11 HOH HOH . D 4 HOH A 28 2228 70 HOH HOH . D 4 HOH A 29 2229 62 HOH HOH . D 4 HOH A 30 2230 66 HOH HOH . D 4 HOH A 31 2231 60 HOH HOH . D 4 HOH A 32 2232 80 HOH HOH . D 4 HOH A 33 2233 123 HOH HOH . D 4 HOH A 34 2234 38 HOH HOH . D 4 HOH A 35 2235 9 HOH HOH . D 4 HOH A 36 2236 114 HOH HOH . D 4 HOH A 37 2237 86 HOH HOH . D 4 HOH A 38 2238 25 HOH HOH . D 4 HOH A 39 2239 35 HOH HOH . D 4 HOH A 40 2240 91 HOH HOH . D 4 HOH A 41 2241 59 HOH HOH . D 4 HOH A 42 2242 120 HOH HOH . D 4 HOH A 43 2243 84 HOH HOH . D 4 HOH A 44 2244 81 HOH HOH . D 4 HOH A 45 2245 93 HOH HOH . D 4 HOH A 46 2246 49 HOH HOH . D 4 HOH A 47 2247 90 HOH HOH . D 4 HOH A 48 2248 55 HOH HOH . D 4 HOH A 49 2249 22 HOH HOH . D 4 HOH A 50 2250 103 HOH HOH . D 4 HOH A 51 2251 33 HOH HOH . D 4 HOH A 52 2252 5 HOH HOH . D 4 HOH A 53 2253 108 HOH HOH . D 4 HOH A 54 2254 23 HOH HOH . D 4 HOH A 55 2255 74 HOH HOH . D 4 HOH A 56 2256 67 HOH HOH . D 4 HOH A 57 2257 64 HOH HOH . D 4 HOH A 58 2258 119 HOH HOH . D 4 HOH A 59 2259 45 HOH HOH . D 4 HOH A 60 2260 122 HOH HOH . D 4 HOH A 61 2261 112 HOH HOH . D 4 HOH A 62 2262 32 HOH HOH . D 4 HOH A 63 2263 100 HOH HOH . D 4 HOH A 64 2264 47 HOH HOH . D 4 HOH A 65 2265 79 HOH HOH . D 4 HOH A 66 2266 128 HOH HOH . D 4 HOH A 67 2267 39 HOH HOH . D 4 HOH A 68 2268 105 HOH HOH . E 4 HOH B 1 401 56 HOH HOH . E 4 HOH B 2 402 85 HOH HOH . E 4 HOH B 3 403 46 HOH HOH . E 4 HOH B 4 404 126 HOH HOH . E 4 HOH B 5 405 109 HOH HOH . E 4 HOH B 6 406 130 HOH HOH . E 4 HOH B 7 407 31 HOH HOH . E 4 HOH B 8 408 37 HOH HOH . E 4 HOH B 9 409 99 HOH HOH . E 4 HOH B 10 410 50 HOH HOH . E 4 HOH B 11 411 135 HOH HOH . E 4 HOH B 12 412 76 HOH HOH . E 4 HOH B 13 413 96 HOH HOH . E 4 HOH B 14 414 43 HOH HOH . E 4 HOH B 15 415 118 HOH HOH . E 4 HOH B 16 416 63 HOH HOH . E 4 HOH B 17 417 132 HOH HOH . E 4 HOH B 18 418 89 HOH HOH . E 4 HOH B 19 419 68 HOH HOH . E 4 HOH B 20 420 117 HOH HOH . E 4 HOH B 21 421 113 HOH HOH . E 4 HOH B 22 422 137 HOH HOH . E 4 HOH B 23 423 138 HOH HOH . E 4 HOH B 24 424 19 HOH HOH . E 4 HOH B 25 425 106 HOH HOH . E 4 HOH B 26 426 12 HOH HOH . E 4 HOH B 27 427 92 HOH HOH . E 4 HOH B 28 428 134 HOH HOH . E 4 HOH B 29 429 27 HOH HOH . E 4 HOH B 30 430 13 HOH HOH . E 4 HOH B 31 431 34 HOH HOH . E 4 HOH B 32 432 71 HOH HOH . E 4 HOH B 33 433 75 HOH HOH . E 4 HOH B 34 434 20 HOH HOH . E 4 HOH B 35 435 116 HOH HOH . E 4 HOH B 36 436 94 HOH HOH . E 4 HOH B 37 437 111 HOH HOH . E 4 HOH B 38 438 52 HOH HOH . E 4 HOH B 39 439 44 HOH HOH . E 4 HOH B 40 440 42 HOH HOH . E 4 HOH B 41 441 3 HOH HOH . E 4 HOH B 42 442 29 HOH HOH . E 4 HOH B 43 443 139 HOH HOH . E 4 HOH B 44 444 53 HOH HOH . E 4 HOH B 45 445 48 HOH HOH . E 4 HOH B 46 446 24 HOH HOH . E 4 HOH B 47 447 41 HOH HOH . E 4 HOH B 48 448 115 HOH HOH . E 4 HOH B 49 449 77 HOH HOH . E 4 HOH B 50 450 125 HOH HOH . E 4 HOH B 51 451 10 HOH HOH . E 4 HOH B 52 452 58 HOH HOH . E 4 HOH B 53 453 51 HOH HOH . E 4 HOH B 54 454 102 HOH HOH . E 4 HOH B 55 455 73 HOH HOH . E 4 HOH B 56 456 26 HOH HOH . E 4 HOH B 57 457 4 HOH HOH . E 4 HOH B 58 458 110 HOH HOH . E 4 HOH B 59 459 97 HOH HOH . E 4 HOH B 60 460 133 HOH HOH . E 4 HOH B 61 461 40 HOH HOH . E 4 HOH B 62 462 121 HOH HOH . E 4 HOH B 63 463 88 HOH HOH . E 4 HOH B 64 464 65 HOH HOH . E 4 HOH B 65 465 7 HOH HOH . E 4 HOH B 66 466 30 HOH HOH . E 4 HOH B 67 467 101 HOH HOH . E 4 HOH B 68 468 98 HOH HOH . E 4 HOH B 69 469 124 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 WBL . . . C 3 47.004 32.893 26.121 0.34 20 0 N1 WBL 2101 A 1 HETATM 2 C C7 WBL . . . C 3 48.255 32.69 26.639 0.34 20 0 C7 WBL 2101 A 1 HETATM 3 N N2 WBL . . . C 3 49.267 33.563 26.491 0.34 20 0 N2 WBL 2101 A 1 HETATM 4 O O1 WBL . . . C 3 45.943 31.332 29.912 0.34 20 0 O1 WBL 2101 A 1 HETATM 5 C C1 WBL . . . C 3 44.041 31.243 31.831 0.34 20 0 C1 WBL 2101 A 1 HETATM 6 C C5 WBL . . . C 3 47.919 28.919 29.33 0.34 20 0 C5 WBL 2101 A 1 HETATM 7 C C6 WBL . . . C 3 46.725 30.887 27.082 0.34 20 0 C6 WBL 2101 A 1 HETATM 8 C C4 WBL . . . C 3 46.407 29.043 29.222 0.34 20 0 C4 WBL 2101 A 1 HETATM 9 C C3 WBL . . . C 3 45.995 30.148 30.148 0.34 20 0 C3 WBL 2101 A 1 HETATM 10 C C2 WBL . . . C 3 45.269 30.528 32.393 0.34 20 0 C2 WBL 2101 A 1 HETATM 11 O O WBL . . . C 3 45.674 29.654 31.367 0.34 20 0 O WBL 2101 A 1 HETATM 12 C C WBL . . . C 3 43.616 32.315 32.815 0.34 20 0 C WBL 2101 A 1 HETATM 13 S S WBL . . . C 3 45.91 29.458 27.507 0.34 20 0 S WBL 2101 A 1 HETATM 14 S S1 WBL . . . C 3 48.393 31.162 27.494 0.34 20 0 S1 WBL 2101 A 1 HETATM 15 N N WBL . . . C 3 46.189 31.885 26.384 0.34 20 0 N WBL 2101 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 15 #