data_7FKY # _model_server_result.job_id b8JY5kC0_kBs8vlojcpaCg _model_server_result.datetime_utc '2024-11-15 06:01:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7fky # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 7FKY # _exptl.entry_id 7FKY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 233.263 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1-{[(2-methylphenyl)methyl]carbamoyl}cyclopropane-1-carboxylic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.73 _cell.angle_gamma 90 _cell.entry_id 7FKY _cell.length_a 89.783 _cell.length_b 81.789 _cell.length_c 93.918 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7FKY _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C13 H15 N O3' _chem_comp.formula_weight 233.263 _chem_comp.id VKO _chem_comp.mon_nstd_flag . _chem_comp.name '1-{[(2-methylphenyl)methyl]carbamoyl}cyclopropane-1-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C10 C11 VKO sing 376 n n C10 C9 VKO sing 377 n n C11 C9 VKO sing 378 n n O2 C12 VKO doub 379 n n C9 C12 VKO sing 380 n n C9 C8 VKO sing 381 n n O C8 VKO doub 382 n n C12 O1 VKO sing 383 n n C8 N VKO sing 384 n n N C7 VKO sing 385 n n C C1 VKO sing 386 n n C1 C2 VKO doub 387 n y C1 C6 VKO sing 388 n y C7 C6 VKO sing 389 n n C2 C3 VKO sing 390 n y C6 C5 VKO doub 391 n y C3 C4 VKO doub 392 n y C5 C4 VKO sing 393 n y C7 H1 VKO sing 394 n n C7 H2 VKO sing 395 n n O1 H3 VKO sing 396 n n C5 H4 VKO sing 397 n n C4 H5 VKO sing 398 n n C3 H6 VKO sing 399 n n C2 H7 VKO sing 400 n n C11 H8 VKO sing 401 n n C11 H9 VKO sing 402 n n C10 H10 VKO sing 403 n n C10 H11 VKO sing 404 n n N H12 VKO sing 405 n n C H13 VKO sing 406 n n C H14 VKO sing 407 n n C H15 VKO sing 408 n n # _atom_sites.entry_id 7FKY _atom_sites.fract_transf_matrix[1][1] 0.011138 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003776 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012227 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011243 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 VKO B 1 401 401 VKO XXX . D 3 VKO B 1 402 501 VKO XXX . E 4 HOH A 1 2101 54 HOH HOH . E 4 HOH A 2 2102 117 HOH HOH . E 4 HOH A 3 2103 20 HOH HOH . E 4 HOH A 4 2104 119 HOH HOH . E 4 HOH A 5 2105 114 HOH HOH . E 4 HOH A 6 2106 69 HOH HOH . E 4 HOH A 7 2107 53 HOH HOH . E 4 HOH A 8 2108 72 HOH HOH . E 4 HOH A 9 2109 77 HOH HOH . E 4 HOH A 10 2110 50 HOH HOH . E 4 HOH A 11 2111 103 HOH HOH . E 4 HOH A 12 2112 4 HOH HOH . E 4 HOH A 13 2113 84 HOH HOH . E 4 HOH A 14 2114 32 HOH HOH . E 4 HOH A 15 2115 80 HOH HOH . E 4 HOH A 16 2116 6 HOH HOH . E 4 HOH A 17 2117 30 HOH HOH . E 4 HOH A 18 2118 5 HOH HOH . E 4 HOH A 19 2119 14 HOH HOH . E 4 HOH A 20 2120 9 HOH HOH . E 4 HOH A 21 2121 12 HOH HOH . E 4 HOH A 22 2122 21 HOH HOH . E 4 HOH A 23 2123 15 HOH HOH . E 4 HOH A 24 2124 97 HOH HOH . E 4 HOH A 25 2125 113 HOH HOH . E 4 HOH A 26 2126 13 HOH HOH . E 4 HOH A 27 2127 33 HOH HOH . E 4 HOH A 28 2128 3 HOH HOH . E 4 HOH A 29 2129 70 HOH HOH . E 4 HOH A 30 2130 105 HOH HOH . E 4 HOH A 31 2131 118 HOH HOH . E 4 HOH A 32 2132 112 HOH HOH . E 4 HOH A 33 2133 61 HOH HOH . E 4 HOH A 34 2134 86 HOH HOH . E 4 HOH A 35 2135 123 HOH HOH . E 4 HOH A 36 2136 99 HOH HOH . E 4 HOH A 37 2137 41 HOH HOH . E 4 HOH A 38 2138 122 HOH HOH . E 4 HOH A 39 2139 55 HOH HOH . E 4 HOH A 40 2140 11 HOH HOH . E 4 HOH A 41 2141 8 HOH HOH . E 4 HOH A 42 2142 57 HOH HOH . E 4 HOH A 43 2143 10 HOH HOH . E 4 HOH A 44 2144 40 HOH HOH . E 4 HOH A 45 2145 96 HOH HOH . E 4 HOH A 46 2146 79 HOH HOH . E 4 HOH A 47 2147 56 HOH HOH . E 4 HOH A 48 2148 26 HOH HOH . E 4 HOH A 49 2149 62 HOH HOH . E 4 HOH A 50 2150 25 HOH HOH . E 4 HOH A 51 2151 36 HOH HOH . E 4 HOH A 52 2152 109 HOH HOH . E 4 HOH A 53 2153 49 HOH HOH . E 4 HOH A 54 2154 83 HOH HOH . E 4 HOH A 55 2155 45 HOH HOH . E 4 HOH A 56 2156 52 HOH HOH . E 4 HOH A 57 2157 82 HOH HOH . E 4 HOH A 58 2158 71 HOH HOH . E 4 HOH A 59 2159 116 HOH HOH . E 4 HOH A 60 2160 81 HOH HOH . F 4 HOH B 1 501 94 HOH HOH . F 4 HOH B 2 502 2 HOH HOH . F 4 HOH B 3 503 64 HOH HOH . F 4 HOH B 4 504 87 HOH HOH . F 4 HOH B 5 505 67 HOH HOH . F 4 HOH B 6 506 124 HOH HOH . F 4 HOH B 7 507 95 HOH HOH . F 4 HOH B 8 508 7 HOH HOH . F 4 HOH B 9 509 28 HOH HOH . F 4 HOH B 10 510 60 HOH HOH . F 4 HOH B 11 511 35 HOH HOH . F 4 HOH B 12 512 59 HOH HOH . F 4 HOH B 13 513 125 HOH HOH . F 4 HOH B 14 514 91 HOH HOH . F 4 HOH B 15 515 48 HOH HOH . F 4 HOH B 16 516 89 HOH HOH . F 4 HOH B 17 517 108 HOH HOH . F 4 HOH B 18 518 23 HOH HOH . F 4 HOH B 19 519 44 HOH HOH . F 4 HOH B 20 520 120 HOH HOH . F 4 HOH B 21 521 115 HOH HOH . F 4 HOH B 22 522 78 HOH HOH . F 4 HOH B 23 523 90 HOH HOH . F 4 HOH B 24 524 98 HOH HOH . F 4 HOH B 25 525 43 HOH HOH . F 4 HOH B 26 526 102 HOH HOH . F 4 HOH B 27 527 76 HOH HOH . F 4 HOH B 28 528 121 HOH HOH . F 4 HOH B 29 529 39 HOH HOH . F 4 HOH B 30 530 29 HOH HOH . F 4 HOH B 31 531 75 HOH HOH . F 4 HOH B 32 532 104 HOH HOH . F 4 HOH B 33 533 16 HOH HOH . F 4 HOH B 34 534 46 HOH HOH . F 4 HOH B 35 535 107 HOH HOH . F 4 HOH B 36 536 22 HOH HOH . F 4 HOH B 37 537 111 HOH HOH . F 4 HOH B 38 538 110 HOH HOH . F 4 HOH B 39 539 27 HOH HOH . F 4 HOH B 40 540 51 HOH HOH . F 4 HOH B 41 541 18 HOH HOH . F 4 HOH B 42 542 101 HOH HOH . F 4 HOH B 43 543 88 HOH HOH . F 4 HOH B 44 544 37 HOH HOH . F 4 HOH B 45 545 74 HOH HOH . F 4 HOH B 46 546 24 HOH HOH . F 4 HOH B 47 547 85 HOH HOH . F 4 HOH B 48 548 38 HOH HOH . F 4 HOH B 49 549 66 HOH HOH . F 4 HOH B 50 550 100 HOH HOH . F 4 HOH B 51 551 34 HOH HOH . F 4 HOH B 52 552 92 HOH HOH . F 4 HOH B 53 553 65 HOH HOH . F 4 HOH B 54 554 106 HOH HOH . F 4 HOH B 55 555 19 HOH HOH . F 4 HOH B 56 556 68 HOH HOH . F 4 HOH B 57 557 17 HOH HOH . F 4 HOH B 58 558 73 HOH HOH . F 4 HOH B 59 559 93 HOH HOH . F 4 HOH B 60 560 42 HOH HOH . F 4 HOH B 61 561 58 HOH HOH . F 4 HOH B 62 562 31 HOH HOH . F 4 HOH B 63 563 47 HOH HOH . F 4 HOH B 64 564 63 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C7 VKO . . . C 3 -0.926 15.32 -35.756 0.7 20 0 C7 VKO 401 B 1 HETATM 2 C C8 VKO . . . C 3 -1.641 15.937 -37.877 0.7 20 0 C8 VKO 401 B 1 HETATM 3 C C9 VKO . . . C 3 -2.757 16.16 -38.758 0.7 20 0 C9 VKO 401 B 1 HETATM 4 O O1 VKO . . . C 3 -4.293 15.953 -37.071 0.7 20 0 O1 VKO 401 B 1 HETATM 5 C C1 VKO . . . C 3 -0.259 12.79 -35.911 0.7 20 0 C1 VKO 401 B 1 HETATM 6 C C5 VKO . . . C 3 -2.396 13.586 -35.016 0.7 20 0 C5 VKO 401 B 1 HETATM 7 C C6 VKO . . . C 3 -1.194 13.904 -35.576 0.7 20 0 C6 VKO 401 B 1 HETATM 8 C C4 VKO . . . C 3 -2.656 12.243 -34.795 0.7 20 0 C4 VKO 401 B 1 HETATM 9 C C3 VKO . . . C 3 -1.771 11.25 -35.132 0.7 20 0 C3 VKO 401 B 1 HETATM 10 C C2 VKO . . . C 3 -0.578 11.504 -35.694 0.7 20 0 C2 VKO 401 B 1 HETATM 11 O O2 VKO . . . C 3 -5.069 16.745 -38.835 0.7 20 -1 O2 VKO 401 B 1 HETATM 12 C C12 VKO . . . C 3 -4.142 16.279 -38.185 0.7 20 0 C12 VKO 401 B 1 HETATM 13 C C11 VKO . . . C 3 -2.449 16.993 -39.938 0.7 20 0 C11 VKO 401 B 1 HETATM 14 C C10 VKO . . . C 3 -2.58 15.523 -40.067 0.7 20 0 C10 VKO 401 B 1 HETATM 15 O O VKO . . . C 3 -0.507 16.073 -38.241 0.7 20 0 O VKO 401 B 1 HETATM 16 N N VKO . . . C 3 -1.965 15.599 -36.666 0.7 20 0 N VKO 401 B 1 HETATM 17 C C VKO . . . C 3 1.055 13.091 -36.433 0.7 20 0 C VKO 401 B 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 242 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 17 #