data_7FMO # _model_server_result.job_id p0Tvl_jdbpB63YI9kjVUHg _model_server_result.datetime_utc '2024-10-20 20:45:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7fmo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":2102}' # _entry.id 7FMO # _exptl.entry_id 7FMO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.56 _cell.angle_gamma 90 _cell.entry_id 7FMO _cell.length_a 88.744 _cell.length_b 82.164 _cell.length_c 94.216 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7FMO _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 7FMO _atom_sites.fract_transf_matrix[1][1] 0.011268 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003783 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012171 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011196 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 VVK A 1 2101 2101 VVK XXX . D 4 DMS A 1 2102 2201 DMS DMS . E 5 HOH A 1 2201 29 HOH HOH . E 5 HOH A 2 2202 121 HOH HOH . E 5 HOH A 3 2203 77 HOH HOH . E 5 HOH A 4 2204 120 HOH HOH . E 5 HOH A 5 2205 63 HOH HOH . E 5 HOH A 6 2206 31 HOH HOH . E 5 HOH A 7 2207 56 HOH HOH . E 5 HOH A 8 2208 109 HOH HOH . E 5 HOH A 9 2209 44 HOH HOH . E 5 HOH A 10 2210 71 HOH HOH . E 5 HOH A 11 2211 43 HOH HOH . E 5 HOH A 12 2212 97 HOH HOH . E 5 HOH A 13 2213 46 HOH HOH . E 5 HOH A 14 2214 28 HOH HOH . E 5 HOH A 15 2215 6 HOH HOH . E 5 HOH A 16 2216 26 HOH HOH . E 5 HOH A 17 2217 33 HOH HOH . E 5 HOH A 18 2218 38 HOH HOH . E 5 HOH A 19 2219 5 HOH HOH . E 5 HOH A 20 2220 7 HOH HOH . E 5 HOH A 21 2221 2 HOH HOH . E 5 HOH A 22 2222 50 HOH HOH . E 5 HOH A 23 2223 13 HOH HOH . E 5 HOH A 24 2224 69 HOH HOH . E 5 HOH A 25 2225 105 HOH HOH . E 5 HOH A 26 2226 99 HOH HOH . E 5 HOH A 27 2227 35 HOH HOH . E 5 HOH A 28 2228 19 HOH HOH . E 5 HOH A 29 2229 90 HOH HOH . E 5 HOH A 30 2230 17 HOH HOH . E 5 HOH A 31 2231 100 HOH HOH . E 5 HOH A 32 2232 68 HOH HOH . E 5 HOH A 33 2233 82 HOH HOH . E 5 HOH A 34 2234 48 HOH HOH . E 5 HOH A 35 2235 72 HOH HOH . E 5 HOH A 36 2236 74 HOH HOH . E 5 HOH A 37 2237 34 HOH HOH . E 5 HOH A 38 2238 22 HOH HOH . E 5 HOH A 39 2239 83 HOH HOH . E 5 HOH A 40 2240 116 HOH HOH . E 5 HOH A 41 2241 8 HOH HOH . E 5 HOH A 42 2242 122 HOH HOH . E 5 HOH A 43 2243 64 HOH HOH . E 5 HOH A 44 2244 73 HOH HOH . E 5 HOH A 45 2245 39 HOH HOH . E 5 HOH A 46 2246 18 HOH HOH . E 5 HOH A 47 2247 41 HOH HOH . E 5 HOH A 48 2248 53 HOH HOH . E 5 HOH A 49 2249 30 HOH HOH . E 5 HOH A 50 2250 104 HOH HOH . E 5 HOH A 51 2251 80 HOH HOH . E 5 HOH A 52 2252 103 HOH HOH . E 5 HOH A 53 2253 91 HOH HOH . E 5 HOH A 54 2254 20 HOH HOH . E 5 HOH A 55 2255 94 HOH HOH . E 5 HOH A 56 2256 4 HOH HOH . E 5 HOH A 57 2257 102 HOH HOH . E 5 HOH A 58 2258 60 HOH HOH . E 5 HOH A 59 2259 119 HOH HOH . E 5 HOH A 60 2260 85 HOH HOH . E 5 HOH A 61 2261 107 HOH HOH . E 5 HOH A 62 2262 16 HOH HOH . F 5 HOH B 1 401 89 HOH HOH . F 5 HOH B 2 402 115 HOH HOH . F 5 HOH B 3 403 110 HOH HOH . F 5 HOH B 4 404 55 HOH HOH . F 5 HOH B 5 405 57 HOH HOH . F 5 HOH B 6 406 27 HOH HOH . F 5 HOH B 7 407 113 HOH HOH . F 5 HOH B 8 408 76 HOH HOH . F 5 HOH B 9 409 9 HOH HOH . F 5 HOH B 10 410 66 HOH HOH . F 5 HOH B 11 411 21 HOH HOH . F 5 HOH B 12 412 81 HOH HOH . F 5 HOH B 13 413 106 HOH HOH . F 5 HOH B 14 414 67 HOH HOH . F 5 HOH B 15 415 96 HOH HOH . F 5 HOH B 16 416 32 HOH HOH . F 5 HOH B 17 417 47 HOH HOH . F 5 HOH B 18 418 95 HOH HOH . F 5 HOH B 19 419 61 HOH HOH . F 5 HOH B 20 420 62 HOH HOH . F 5 HOH B 21 421 87 HOH HOH . F 5 HOH B 22 422 108 HOH HOH . F 5 HOH B 23 423 117 HOH HOH . F 5 HOH B 24 424 51 HOH HOH . F 5 HOH B 25 425 42 HOH HOH . F 5 HOH B 26 426 58 HOH HOH . F 5 HOH B 27 427 49 HOH HOH . F 5 HOH B 28 428 65 HOH HOH . F 5 HOH B 29 429 118 HOH HOH . F 5 HOH B 30 430 15 HOH HOH . F 5 HOH B 31 431 92 HOH HOH . F 5 HOH B 32 432 36 HOH HOH . F 5 HOH B 33 433 101 HOH HOH . F 5 HOH B 34 434 70 HOH HOH . F 5 HOH B 35 435 78 HOH HOH . F 5 HOH B 36 436 14 HOH HOH . F 5 HOH B 37 437 45 HOH HOH . F 5 HOH B 38 438 98 HOH HOH . F 5 HOH B 39 439 59 HOH HOH . F 5 HOH B 40 440 11 HOH HOH . F 5 HOH B 41 441 86 HOH HOH . F 5 HOH B 42 442 84 HOH HOH . F 5 HOH B 43 443 23 HOH HOH . F 5 HOH B 44 444 40 HOH HOH . F 5 HOH B 45 445 93 HOH HOH . F 5 HOH B 46 446 88 HOH HOH . F 5 HOH B 47 447 79 HOH HOH . F 5 HOH B 48 448 54 HOH HOH . F 5 HOH B 49 449 25 HOH HOH . F 5 HOH B 50 450 24 HOH HOH . F 5 HOH B 51 451 112 HOH HOH . F 5 HOH B 52 452 75 HOH HOH . F 5 HOH B 53 453 111 HOH HOH . F 5 HOH B 54 454 114 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . D 4 47.573 15.355 22.345 1 20 0 S DMS 2102 A 1 HETATM 2 O O DMS . . . D 4 47.089 16.605 21.95 1 20 0 O DMS 2102 A 1 HETATM 3 C C1 DMS . . . D 4 48.681 14.826 21.122 1 20 0 C1 DMS 2102 A 1 HETATM 4 C C2 DMS . . . D 4 46.261 14.287 21.88 1 20 0 C2 DMS 2102 A 1 HETATM 5 H H11 DMS . . . D 4 49.588 14.975 21.416 1 20 0 H11 DMS 2102 A 1 HETATM 6 H H12 DMS . . . D 4 48.521 15.323 20.308 1 20 0 H12 DMS 2102 A 1 HETATM 7 H H13 DMS . . . D 4 48.548 13.883 20.955 1 20 0 H13 DMS 2102 A 1 HETATM 8 H H21 DMS . . . D 4 45.493 14.459 22.442 1 20 0 H21 DMS 2102 A 1 HETATM 9 H H22 DMS . . . D 4 46.541 13.368 21.983 1 20 0 H22 DMS 2102 A 1 HETATM 10 H H23 DMS . . . D 4 46.027 14.45 20.957 1 20 0 H23 DMS 2102 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 10 #