data_7FN2 # _model_server_result.job_id bvgoK-_JKn9VOd4ZZpYgow _model_server_result.datetime_utc '2024-11-28 11:47:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7fn2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 7FN2 # _exptl.entry_id 7FN2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 193.246 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[2-(morpholin-4-yl)pyridin-4-yl]methanamine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.13 _cell.angle_gamma 90 _cell.entry_id 7FN2 _cell.length_a 88.731 _cell.length_b 81.836 _cell.length_c 93.037 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7FN2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H15 N3 O' _chem_comp.formula_weight 193.246 _chem_comp.id VXF _chem_comp.mon_nstd_flag . _chem_comp.name 1-[2-(morpholin-4-yl)pyridin-4-yl]methanamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N VXF doub 376 n y C1 C VXF sing 377 n y N C2 VXF sing 378 n y C C4 VXF doub 379 n y C9 N2 VXF sing 380 n n C9 C8 VXF sing 381 n n C2 N2 VXF sing 382 n n C2 C3 VXF doub 383 n y C4 C3 VXF sing 384 n y C4 C5 VXF sing 385 n n N2 C6 VXF sing 386 n n C5 N1 VXF sing 387 n n C8 O VXF sing 388 n n O C7 VXF sing 389 n n C7 C6 VXF sing 390 n n N1 H1 VXF sing 391 n n N1 H2 VXF sing 392 n n C7 H4 VXF sing 393 n n C7 H5 VXF sing 394 n n C8 H6 VXF sing 395 n n C8 H7 VXF sing 396 n n C9 H8 VXF sing 397 n n C9 H9 VXF sing 398 n n C1 H10 VXF sing 399 n n C5 H11 VXF sing 400 n n C5 H12 VXF sing 401 n n C6 H13 VXF sing 402 n n C6 H14 VXF sing 403 n n C3 H15 VXF sing 404 n n C H16 VXF sing 405 n n # _atom_sites.entry_id 7FN2 _atom_sites.fract_transf_matrix[1][1] 0.01127 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00369 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01222 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01131 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 VXF B 1 401 401 VXF XXX . D 4 HOH A 1 2101 45 HOH HOH . D 4 HOH A 2 2102 74 HOH HOH . D 4 HOH A 3 2103 4 HOH HOH . D 4 HOH A 4 2104 54 HOH HOH . D 4 HOH A 5 2105 81 HOH HOH . D 4 HOH A 6 2106 64 HOH HOH . D 4 HOH A 7 2107 42 HOH HOH . D 4 HOH A 8 2108 43 HOH HOH . D 4 HOH A 9 2109 5 HOH HOH . D 4 HOH A 10 2110 16 HOH HOH . D 4 HOH A 11 2111 86 HOH HOH . D 4 HOH A 12 2112 77 HOH HOH . D 4 HOH A 13 2113 27 HOH HOH . D 4 HOH A 14 2114 51 HOH HOH . D 4 HOH A 15 2115 79 HOH HOH . D 4 HOH A 16 2116 35 HOH HOH . D 4 HOH A 17 2117 11 HOH HOH . D 4 HOH A 18 2118 30 HOH HOH . D 4 HOH A 19 2119 40 HOH HOH . D 4 HOH A 20 2120 22 HOH HOH . D 4 HOH A 21 2121 14 HOH HOH . D 4 HOH A 22 2122 78 HOH HOH . D 4 HOH A 23 2123 10 HOH HOH . D 4 HOH A 24 2124 46 HOH HOH . D 4 HOH A 25 2125 34 HOH HOH . D 4 HOH A 26 2126 73 HOH HOH . D 4 HOH A 27 2127 69 HOH HOH . D 4 HOH A 28 2128 65 HOH HOH . D 4 HOH A 29 2129 13 HOH HOH . D 4 HOH A 30 2130 32 HOH HOH . D 4 HOH A 31 2131 66 HOH HOH . D 4 HOH A 32 2132 9 HOH HOH . D 4 HOH A 33 2133 60 HOH HOH . D 4 HOH A 34 2134 31 HOH HOH . D 4 HOH A 35 2135 84 HOH HOH . D 4 HOH A 36 2136 93 HOH HOH . D 4 HOH A 37 2137 82 HOH HOH . D 4 HOH A 38 2138 26 HOH HOH . D 4 HOH A 39 2139 7 HOH HOH . D 4 HOH A 40 2140 52 HOH HOH . D 4 HOH A 41 2141 20 HOH HOH . D 4 HOH A 42 2142 29 HOH HOH . E 4 HOH B 1 501 2 HOH HOH . E 4 HOH B 2 502 92 HOH HOH . E 4 HOH B 3 503 71 HOH HOH . E 4 HOH B 4 504 44 HOH HOH . E 4 HOH B 5 505 28 HOH HOH . E 4 HOH B 6 506 39 HOH HOH . E 4 HOH B 7 507 49 HOH HOH . E 4 HOH B 8 508 50 HOH HOH . E 4 HOH B 9 509 12 HOH HOH . E 4 HOH B 10 510 47 HOH HOH . E 4 HOH B 11 511 38 HOH HOH . E 4 HOH B 12 512 24 HOH HOH . E 4 HOH B 13 513 76 HOH HOH . E 4 HOH B 14 514 68 HOH HOH . E 4 HOH B 15 515 6 HOH HOH . E 4 HOH B 16 516 25 HOH HOH . E 4 HOH B 17 517 21 HOH HOH . E 4 HOH B 18 518 61 HOH HOH . E 4 HOH B 19 519 89 HOH HOH . E 4 HOH B 20 520 18 HOH HOH . E 4 HOH B 21 521 17 HOH HOH . E 4 HOH B 22 522 23 HOH HOH . E 4 HOH B 23 523 41 HOH HOH . E 4 HOH B 24 524 70 HOH HOH . E 4 HOH B 25 525 56 HOH HOH . E 4 HOH B 26 526 62 HOH HOH . E 4 HOH B 27 527 36 HOH HOH . E 4 HOH B 28 528 33 HOH HOH . E 4 HOH B 29 529 63 HOH HOH . E 4 HOH B 30 530 72 HOH HOH . E 4 HOH B 31 531 83 HOH HOH . E 4 HOH B 32 532 85 HOH HOH . E 4 HOH B 33 533 80 HOH HOH . E 4 HOH B 34 534 37 HOH HOH . E 4 HOH B 35 535 48 HOH HOH . E 4 HOH B 36 536 8 HOH HOH . E 4 HOH B 37 537 53 HOH HOH . E 4 HOH B 38 538 55 HOH HOH . E 4 HOH B 39 539 57 HOH HOH . E 4 HOH B 40 540 15 HOH HOH . E 4 HOH B 41 541 88 HOH HOH . E 4 HOH B 42 542 87 HOH HOH . E 4 HOH B 43 543 19 HOH HOH . E 4 HOH B 44 544 58 HOH HOH . E 4 HOH B 45 545 3 HOH HOH . E 4 HOH B 46 546 91 HOH HOH . E 4 HOH B 47 547 67 HOH HOH . E 4 HOH B 48 548 90 HOH HOH . E 4 HOH B 49 549 59 HOH HOH . E 4 HOH B 50 550 75 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 VXF . . . C 3 19.662 4.424 19.366 0.58 20 1 N1 VXF 401 B 1 HETATM 2 C C7 VXF . . . C 3 12.412 5.229 19.076 0.58 20 0 C7 VXF 401 B 1 HETATM 3 C C8 VXF . . . C 3 12.165 2.973 18.647 0.58 20 0 C8 VXF 401 B 1 HETATM 4 N N2 VXF . . . C 3 14.265 4.055 18.083 0.58 20 0 N2 VXF 401 B 1 HETATM 5 C C9 VXF . . . C 3 13.186 3.244 17.517 0.58 20 0 C9 VXF 401 B 1 HETATM 6 C C1 VXF . . . C 3 17.014 2.776 16.274 0.58 20 0 C1 VXF 401 B 1 HETATM 7 C C5 VXF . . . C 3 18.974 5.199 18.236 0.58 20 0 C5 VXF 401 B 1 HETATM 8 C C6 VXF . . . C 3 13.904 4.864 19.244 0.58 20 0 C6 VXF 401 B 1 HETATM 9 C C4 VXF . . . C 3 17.834 4.414 17.734 0.58 20 0 C4 VXF 401 B 1 HETATM 10 C C3 VXF . . . C 3 16.597 4.599 18.223 0.58 20 0 C3 VXF 401 B 1 HETATM 11 C C2 VXF . . . C 3 15.571 3.841 17.689 0.58 20 0 C2 VXF 401 B 1 HETATM 12 C C VXF . . . C 3 18.079 3.513 16.757 0.58 20 0 C VXF 401 B 1 HETATM 13 N N VXF . . . C 3 15.794 2.914 16.71 0.58 20 0 N VXF 401 B 1 HETATM 14 O O VXF . . . C 3 11.544 4.137 19.025 0.58 20 0 O VXF 401 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 82 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 14 #