data_7FN3 # _model_server_result.job_id 6-WBTjqn0Zcd27ottb762Q _model_server_result.datetime_utc '2024-10-10 17:17:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7fn3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 7FN3 # _exptl.entry_id 7FN3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 165.982 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(3-ethoxyphenyl)boronic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.39 _cell.angle_gamma 90 _cell.entry_id 7FN3 _cell.length_a 88.838 _cell.length_b 81.979 _cell.length_c 94.056 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7FN3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H11 B O3' _chem_comp.formula_weight 165.982 _chem_comp.id VP8 _chem_comp.mon_nstd_flag . _chem_comp.name '(3-ethoxyphenyl)boronic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C1 VP8 doub 376 n y C2 C3 VP8 sing 377 n y C1 C VP8 sing 378 n y C3 C4 VP8 doub 379 n y O2 B VP8 sing 380 n n C B VP8 sing 381 n n C C5 VP8 doub 382 n y C4 C5 VP8 sing 383 n y C4 O VP8 sing 384 n n B O1 VP8 sing 385 n n C6 O VP8 sing 386 n n C6 C7 VP8 sing 387 n n C7 H1 VP8 sing 388 n n C7 H2 VP8 sing 389 n n C7 H3 VP8 sing 390 n n C1 H4 VP8 sing 391 n n C5 H5 VP8 sing 392 n n C6 H6 VP8 sing 393 n n C6 H7 VP8 sing 394 n n C3 H8 VP8 sing 395 n n C2 H9 VP8 sing 396 n n O2 H10 VP8 sing 397 n n O1 H11 VP8 sing 398 n n # _atom_sites.entry_id 7FN3 _atom_sites.fract_transf_matrix[1][1] 0.011256 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003742 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012198 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011204 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 VP8 B 1 501 501 VP8 XXX . D 4 HOH A 1 2101 63 HOH HOH . D 4 HOH A 2 2102 5 HOH HOH . D 4 HOH A 3 2103 73 HOH HOH . D 4 HOH A 4 2104 33 HOH HOH . D 4 HOH A 5 2105 51 HOH HOH . D 4 HOH A 6 2106 48 HOH HOH . D 4 HOH A 7 2107 40 HOH HOH . D 4 HOH A 8 2108 9 HOH HOH . D 4 HOH A 9 2109 45 HOH HOH . D 4 HOH A 10 2110 35 HOH HOH . D 4 HOH A 11 2111 12 HOH HOH . D 4 HOH A 12 2112 53 HOH HOH . D 4 HOH A 13 2113 58 HOH HOH . D 4 HOH A 14 2114 3 HOH HOH . D 4 HOH A 15 2115 68 HOH HOH . D 4 HOH A 16 2116 8 HOH HOH . D 4 HOH A 17 2117 25 HOH HOH . D 4 HOH A 18 2118 49 HOH HOH . D 4 HOH A 19 2119 57 HOH HOH . D 4 HOH A 20 2120 74 HOH HOH . D 4 HOH A 21 2121 20 HOH HOH . D 4 HOH A 22 2122 66 HOH HOH . D 4 HOH A 23 2123 16 HOH HOH . D 4 HOH A 24 2124 32 HOH HOH . D 4 HOH A 25 2125 82 HOH HOH . D 4 HOH A 26 2126 18 HOH HOH . D 4 HOH A 27 2127 6 HOH HOH . D 4 HOH A 28 2128 11 HOH HOH . D 4 HOH A 29 2129 39 HOH HOH . D 4 HOH A 30 2130 37 HOH HOH . D 4 HOH A 31 2131 38 HOH HOH . D 4 HOH A 32 2132 72 HOH HOH . D 4 HOH A 33 2133 17 HOH HOH . D 4 HOH A 34 2134 46 HOH HOH . D 4 HOH A 35 2135 7 HOH HOH . D 4 HOH A 36 2136 55 HOH HOH . D 4 HOH A 37 2137 22 HOH HOH . D 4 HOH A 38 2138 29 HOH HOH . D 4 HOH A 39 2139 62 HOH HOH . D 4 HOH A 40 2140 27 HOH HOH . D 4 HOH A 41 2141 43 HOH HOH . D 4 HOH A 42 2142 2 HOH HOH . D 4 HOH A 43 2143 79 HOH HOH . D 4 HOH A 44 2144 47 HOH HOH . D 4 HOH A 45 2145 65 HOH HOH . D 4 HOH A 46 2146 59 HOH HOH . E 4 HOH B 1 601 84 HOH HOH . E 4 HOH B 2 602 30 HOH HOH . E 4 HOH B 3 603 87 HOH HOH . E 4 HOH B 4 604 24 HOH HOH . E 4 HOH B 5 605 31 HOH HOH . E 4 HOH B 6 606 28 HOH HOH . E 4 HOH B 7 607 77 HOH HOH . E 4 HOH B 8 608 42 HOH HOH . E 4 HOH B 9 609 85 HOH HOH . E 4 HOH B 10 610 69 HOH HOH . E 4 HOH B 11 611 15 HOH HOH . E 4 HOH B 12 612 75 HOH HOH . E 4 HOH B 13 613 52 HOH HOH . E 4 HOH B 14 614 14 HOH HOH . E 4 HOH B 15 615 23 HOH HOH . E 4 HOH B 16 616 76 HOH HOH . E 4 HOH B 17 617 56 HOH HOH . E 4 HOH B 18 618 70 HOH HOH . E 4 HOH B 19 619 83 HOH HOH . E 4 HOH B 20 620 34 HOH HOH . E 4 HOH B 21 621 80 HOH HOH . E 4 HOH B 22 622 61 HOH HOH . E 4 HOH B 23 623 50 HOH HOH . E 4 HOH B 24 624 4 HOH HOH . E 4 HOH B 25 625 54 HOH HOH . E 4 HOH B 26 626 26 HOH HOH . E 4 HOH B 27 627 19 HOH HOH . E 4 HOH B 28 628 21 HOH HOH . E 4 HOH B 29 629 67 HOH HOH . E 4 HOH B 30 630 88 HOH HOH . E 4 HOH B 31 631 71 HOH HOH . E 4 HOH B 32 632 13 HOH HOH . E 4 HOH B 33 633 78 HOH HOH . E 4 HOH B 34 634 81 HOH HOH . E 4 HOH B 35 635 41 HOH HOH . E 4 HOH B 36 636 44 HOH HOH . E 4 HOH B 37 637 60 HOH HOH . E 4 HOH B 38 638 64 HOH HOH . E 4 HOH B 39 639 36 HOH HOH . E 4 HOH B 40 640 86 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C7 VP8 . A . C 3 16.98 7.049 -34.535 0.02 20 0 C7 VP8 501 B 1 HETATM 2 C C7 VP8 . B . C 3 16.873 7.034 -34.517 0.5 20 0 C7 VP8 501 B 1 HETATM 3 O O1 VP8 . A . C 3 23.927 8.359 -34.811 0.02 20 0 O1 VP8 501 B 1 HETATM 4 O O1 VP8 . B . C 3 23.998 10.195 -34.956 0.5 20 0 O1 VP8 501 B 1 HETATM 5 C C1 VP8 . A . C 3 21.869 9.623 -37.649 0.02 20 0 C1 VP8 501 B 1 HETATM 6 C C1 VP8 . B . C 3 21.922 9.642 -37.38 0.5 20 0 C1 VP8 501 B 1 HETATM 7 C C5 VP8 . A . C 3 21.244 8.468 -35.661 0.02 20 0 C5 VP8 501 B 1 HETATM 8 C C5 VP8 . B . C 3 21.046 8.496 -35.481 0.5 20 0 C5 VP8 501 B 1 HETATM 9 C C6 VP8 . A . C 3 17.67 7.776 -35.641 0.02 20 0 C6 VP8 501 B 1 HETATM 10 C C6 VP8 . B . C 3 17.523 7.954 -35.499 0.5 20 0 C6 VP8 501 B 1 HETATM 11 C C4 VP8 . A . C 3 19.938 8.428 -36.062 0.02 20 0 C4 VP8 501 B 1 HETATM 12 C C4 VP8 . B . C 3 19.831 8.383 -36.057 0.5 20 0 C4 VP8 501 B 1 HETATM 13 C C3 VP8 . A . C 3 19.565 9.017 -37.274 0.02 20 0 C3 VP8 501 B 1 HETATM 14 C C3 VP8 . B . C 3 19.603 8.937 -37.328 0.5 20 0 C3 VP8 501 B 1 HETATM 15 C C2 VP8 . A . C 3 20.54 9.621 -38.057 0.02 20 0 C2 VP8 501 B 1 HETATM 16 C C2 VP8 . B . C 3 20.663 9.568 -37.986 0.5 20 0 C2 VP8 501 B 1 HETATM 17 O O2 VP8 . A . C 3 24.758 9.004 -36.772 0.02 20 0 O2 VP8 501 B 1 HETATM 18 O O2 VP8 . B . C 3 23.998 8.022 -34.847 0.5 20 0 O2 VP8 501 B 1 HETATM 19 B B VP8 . A . C 3 23.66 8.825 -36.013 0.02 20 0 B VP8 501 B 1 HETATM 20 B B VP8 . B . C 3 23.388 9.093 -35.308 0.5 20 0 B VP8 501 B 1 HETATM 21 C C VP8 . A . C 3 22.228 9.022 -36.439 0.02 20 0 C VP8 501 B 1 HETATM 22 C C VP8 . B . C 3 22.102 9.095 -36.094 0.5 20 0 C VP8 501 B 1 HETATM 23 O O VP8 . A . C 3 19.024 7.739 -35.296 0.02 20 0 O VP8 501 B 1 HETATM 24 O O VP8 . B . C 3 18.88 7.635 -35.396 0.5 20 0 O VP8 501 B 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 24 #