data_7FNB # _model_server_result.job_id b-WXpjsUF-z5gjtRyPa5UQ _model_server_result.datetime_utc '2024-10-18 04:20:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7fnb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":2101}' # _entry.id 7FNB # _exptl.entry_id 7FNB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 174.199 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-cyano-N-methyl-N-phenylacetamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.47 _cell.angle_gamma 90 _cell.entry_id 7FNB _cell.length_a 90.503 _cell.length_b 81.48 _cell.length_c 92.953 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7FNB _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H10 N2 O' _chem_comp.formula_weight 174.199 _chem_comp.id VZC _chem_comp.mon_nstd_flag . _chem_comp.name 2-cyano-N-methyl-N-phenylacetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C3 C2 VZC doub 376 n y C3 C4 VZC sing 377 n y C2 C1 VZC sing 378 n y C4 C5 VZC doub 379 n y C N VZC sing 380 n n C1 N VZC sing 381 n n C1 C6 VZC doub 382 n y C5 C6 VZC sing 383 n y N C7 VZC sing 384 n n C7 O VZC doub 385 n n C7 C8 VZC sing 386 n n C8 C9 VZC sing 387 n n C9 N1 VZC trip 388 n n C8 H1 VZC sing 389 n n C8 H2 VZC sing 390 n n C5 H3 VZC sing 391 n n C6 H4 VZC sing 392 n n C4 H5 VZC sing 393 n n C3 H6 VZC sing 394 n n C2 H7 VZC sing 395 n n C H8 VZC sing 396 n n C H9 VZC sing 397 n n C H10 VZC sing 398 n n # _atom_sites.entry_id 7FNB _atom_sites.fract_transf_matrix[1][1] 0.011049 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003691 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012273 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011342 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 VZC A 1 2101 2101 VZC XXX . D 4 HOH A 1 2201 115 HOH HOH . D 4 HOH A 2 2202 81 HOH HOH . D 4 HOH A 3 2203 117 HOH HOH . D 4 HOH A 4 2204 57 HOH HOH . D 4 HOH A 5 2205 95 HOH HOH . D 4 HOH A 6 2206 51 HOH HOH . D 4 HOH A 7 2207 14 HOH HOH . D 4 HOH A 8 2208 7 HOH HOH . D 4 HOH A 9 2209 18 HOH HOH . D 4 HOH A 10 2210 33 HOH HOH . D 4 HOH A 11 2211 19 HOH HOH . D 4 HOH A 12 2212 39 HOH HOH . D 4 HOH A 13 2213 92 HOH HOH . D 4 HOH A 14 2214 38 HOH HOH . D 4 HOH A 15 2215 50 HOH HOH . D 4 HOH A 16 2216 44 HOH HOH . D 4 HOH A 17 2217 94 HOH HOH . D 4 HOH A 18 2218 17 HOH HOH . D 4 HOH A 19 2219 66 HOH HOH . D 4 HOH A 20 2220 107 HOH HOH . D 4 HOH A 21 2221 86 HOH HOH . D 4 HOH A 22 2222 28 HOH HOH . D 4 HOH A 23 2223 21 HOH HOH . D 4 HOH A 24 2224 93 HOH HOH . D 4 HOH A 25 2225 63 HOH HOH . D 4 HOH A 26 2226 2 HOH HOH . D 4 HOH A 27 2227 26 HOH HOH . D 4 HOH A 28 2228 31 HOH HOH . D 4 HOH A 29 2229 91 HOH HOH . D 4 HOH A 30 2230 97 HOH HOH . D 4 HOH A 31 2231 62 HOH HOH . D 4 HOH A 32 2232 22 HOH HOH . D 4 HOH A 33 2233 34 HOH HOH . D 4 HOH A 34 2234 78 HOH HOH . D 4 HOH A 35 2235 80 HOH HOH . D 4 HOH A 36 2236 12 HOH HOH . D 4 HOH A 37 2237 13 HOH HOH . D 4 HOH A 38 2238 61 HOH HOH . D 4 HOH A 39 2239 11 HOH HOH . D 4 HOH A 40 2240 6 HOH HOH . D 4 HOH A 41 2241 82 HOH HOH . D 4 HOH A 42 2242 64 HOH HOH . D 4 HOH A 43 2243 46 HOH HOH . D 4 HOH A 44 2244 102 HOH HOH . D 4 HOH A 45 2245 40 HOH HOH . D 4 HOH A 46 2246 53 HOH HOH . D 4 HOH A 47 2247 15 HOH HOH . D 4 HOH A 48 2248 55 HOH HOH . D 4 HOH A 49 2249 30 HOH HOH . D 4 HOH A 50 2250 71 HOH HOH . D 4 HOH A 51 2251 42 HOH HOH . D 4 HOH A 52 2252 96 HOH HOH . D 4 HOH A 53 2253 90 HOH HOH . D 4 HOH A 54 2254 83 HOH HOH . D 4 HOH A 55 2255 103 HOH HOH . D 4 HOH A 56 2256 29 HOH HOH . D 4 HOH A 57 2257 9 HOH HOH . D 4 HOH A 58 2258 5 HOH HOH . D 4 HOH A 59 2259 104 HOH HOH . D 4 HOH A 60 2260 111 HOH HOH . D 4 HOH A 61 2261 108 HOH HOH . D 4 HOH A 62 2262 100 HOH HOH . E 4 HOH B 1 401 105 HOH HOH . E 4 HOH B 2 402 3 HOH HOH . E 4 HOH B 3 403 56 HOH HOH . E 4 HOH B 4 404 116 HOH HOH . E 4 HOH B 5 405 110 HOH HOH . E 4 HOH B 6 406 48 HOH HOH . E 4 HOH B 7 407 106 HOH HOH . E 4 HOH B 8 408 52 HOH HOH . E 4 HOH B 9 409 84 HOH HOH . E 4 HOH B 10 410 25 HOH HOH . E 4 HOH B 11 411 41 HOH HOH . E 4 HOH B 12 412 68 HOH HOH . E 4 HOH B 13 413 98 HOH HOH . E 4 HOH B 14 414 113 HOH HOH . E 4 HOH B 15 415 54 HOH HOH . E 4 HOH B 16 416 10 HOH HOH . E 4 HOH B 17 417 70 HOH HOH . E 4 HOH B 18 418 67 HOH HOH . E 4 HOH B 19 419 49 HOH HOH . E 4 HOH B 20 420 101 HOH HOH . E 4 HOH B 21 421 87 HOH HOH . E 4 HOH B 22 422 37 HOH HOH . E 4 HOH B 23 423 109 HOH HOH . E 4 HOH B 24 424 73 HOH HOH . E 4 HOH B 25 425 58 HOH HOH . E 4 HOH B 26 426 23 HOH HOH . E 4 HOH B 27 427 27 HOH HOH . E 4 HOH B 28 428 36 HOH HOH . E 4 HOH B 29 429 8 HOH HOH . E 4 HOH B 30 430 47 HOH HOH . E 4 HOH B 31 431 43 HOH HOH . E 4 HOH B 32 432 76 HOH HOH . E 4 HOH B 33 433 79 HOH HOH . E 4 HOH B 34 434 77 HOH HOH . E 4 HOH B 35 435 59 HOH HOH . E 4 HOH B 36 436 114 HOH HOH . E 4 HOH B 37 437 88 HOH HOH . E 4 HOH B 38 438 60 HOH HOH . E 4 HOH B 39 439 75 HOH HOH . E 4 HOH B 40 440 35 HOH HOH . E 4 HOH B 41 441 69 HOH HOH . E 4 HOH B 42 442 20 HOH HOH . E 4 HOH B 43 443 85 HOH HOH . E 4 HOH B 44 444 72 HOH HOH . E 4 HOH B 45 445 24 HOH HOH . E 4 HOH B 46 446 45 HOH HOH . E 4 HOH B 47 447 74 HOH HOH . E 4 HOH B 48 448 32 HOH HOH . E 4 HOH B 49 449 4 HOH HOH . E 4 HOH B 50 450 112 HOH HOH . E 4 HOH B 51 451 16 HOH HOH . E 4 HOH B 52 452 65 HOH HOH . E 4 HOH B 53 453 89 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 VZC . . . C 3 47.162 28.929 28.82 0.5 20 0 N1 VZC 2101 A 1 HETATM 2 C C7 VZC . . . C 3 45.685 27.413 26.169 0.5 20 0 C7 VZC 2101 A 1 HETATM 3 C C8 VZC . . . C 3 45.247 28.53 27.096 0.5 20 0 C8 VZC 2101 A 1 HETATM 4 C C9 VZC . . . C 3 46.304 28.767 28.077 0.5 20 0 C9 VZC 2101 A 1 HETATM 5 C C1 VZC . . . C 3 43.604 27.577 24.691 0.5 20 0 C1 VZC 2101 A 1 HETATM 6 C C5 VZC . . . C 3 41.721 28.995 24.978 0.5 20 0 C5 VZC 2101 A 1 HETATM 7 C C6 VZC . . . C 3 42.978 28.598 25.372 0.5 20 0 C6 VZC 2101 A 1 HETATM 8 C C4 VZC . . . C 3 41.08 28.378 23.927 0.5 20 0 C4 VZC 2101 A 1 HETATM 9 C C3 VZC . . . C 3 41.699 27.363 23.254 0.5 20 0 C3 VZC 2101 A 1 HETATM 10 C C2 VZC . . . C 3 42.968 26.965 23.625 0.5 20 0 C2 VZC 2101 A 1 HETATM 11 O O VZC . . . C 3 46.691 26.765 26.415 0.5 20 0 O VZC 2101 A 1 HETATM 12 N N VZC . . . C 3 44.888 27.059 25.057 0.5 20 0 N VZC 2101 A 1 HETATM 13 C C VZC . . . C 3 45.357 26.001 24.193 0.5 20 0 C VZC 2101 A 1 # _model_server_stats.io_time_ms 72 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 13 #