data_7FNP
#
_model_server_result.job_id            jG7YeueZkWWnJkDmgQkV9g 
_model_server_result.datetime_utc      '2024-10-10 23:34:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7fnp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":401}' 
#
_entry.id    7FNP 
#
_exptl.entry_id    7FNP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              228.268 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(3S)-3-methyl-5-oxo-5-[(1,3-thiazol-2-yl)amino]pentanoic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          108.64 
_cell.angle_gamma         90 
_cell.entry_id            7FNP 
_cell.length_a            88.612 
_cell.length_b            82.146 
_cell.length_c            93.957 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7FNP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C9 H12 N2 O3 S' 
_chem_comp.formula_weight    228.268 
_chem_comp.id                VPE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(3S)-3-methyl-5-oxo-5-[(1,3-thiazol-2-yl)amino]pentanoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C6 C5 VPE doub 376 n y 
C6 S VPE sing 377 n y 
C5 N1 VPE sing 378 n y 
S C4 VPE sing 379 n y 
O C3 VPE doub 380 n n 
N1 C4 VPE doub 381 n y 
C C1 VPE sing 382 n n 
C4 N VPE sing 383 n n 
C1 C7 VPE sing 384 n n 
C1 C2 VPE sing 385 n n 
C3 N VPE sing 386 n n 
C3 C2 VPE sing 387 n n 
O1 C8 VPE doub 388 n n 
C7 C8 VPE sing 389 n n 
C8 O2 VPE sing 390 n n 
C7 H1 VPE sing 391 n n 
C7 H2 VPE sing 392 n n 
C1 H3 VPE sing 393 n n 
C5 H4 VPE sing 394 n n 
C6 H5 VPE sing 395 n n 
C2 H6 VPE sing 396 n n 
C2 H7 VPE sing 397 n n 
O2 H8 VPE sing 398 n n 
C H9 VPE sing 399 n n 
C H10 VPE sing 400 n n 
C H11 VPE sing 401 n n 
N H12 VPE sing 402 n n 
#
_atom_sites.entry_id                     7FNP 
_atom_sites.fract_transf_matrix[1][1]    0.011285 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003807 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012173 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011232 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 VPE B 1 401 401 VPE XXX . 
D 4 HOH A 1 2101 87 HOH HOH . 
D 4 HOH A 2 2102 123 HOH HOH . 
D 4 HOH A 3 2103 152 HOH HOH . 
D 4 HOH A 4 2104 138 HOH HOH . 
D 4 HOH A 5 2105 3 HOH HOH . 
D 4 HOH A 6 2106 108 HOH HOH . 
D 4 HOH A 7 2107 110 HOH HOH . 
D 4 HOH A 8 2108 43 HOH HOH . 
D 4 HOH A 9 2109 118 HOH HOH . 
D 4 HOH A 10 2110 92 HOH HOH . 
D 4 HOH A 11 2111 157 HOH HOH . 
D 4 HOH A 12 2112 68 HOH HOH . 
D 4 HOH A 13 2113 14 HOH HOH . 
D 4 HOH A 14 2114 67 HOH HOH . 
D 4 HOH A 15 2115 135 HOH HOH . 
D 4 HOH A 16 2116 148 HOH HOH . 
D 4 HOH A 17 2117 23 HOH HOH . 
D 4 HOH A 18 2118 40 HOH HOH . 
D 4 HOH A 19 2119 106 HOH HOH . 
D 4 HOH A 20 2120 115 HOH HOH . 
D 4 HOH A 21 2121 51 HOH HOH . 
D 4 HOH A 22 2122 131 HOH HOH . 
D 4 HOH A 23 2123 21 HOH HOH . 
D 4 HOH A 24 2124 82 HOH HOH . 
D 4 HOH A 25 2125 61 HOH HOH . 
D 4 HOH A 26 2126 109 HOH HOH . 
D 4 HOH A 27 2127 55 HOH HOH . 
D 4 HOH A 28 2128 80 HOH HOH . 
D 4 HOH A 29 2129 62 HOH HOH . 
D 4 HOH A 30 2130 19 HOH HOH . 
D 4 HOH A 31 2131 6 HOH HOH . 
D 4 HOH A 32 2132 9 HOH HOH . 
D 4 HOH A 33 2133 34 HOH HOH . 
D 4 HOH A 34 2134 100 HOH HOH . 
D 4 HOH A 35 2135 74 HOH HOH . 
D 4 HOH A 36 2136 129 HOH HOH . 
D 4 HOH A 37 2137 10 HOH HOH . 
D 4 HOH A 38 2138 77 HOH HOH . 
D 4 HOH A 39 2139 15 HOH HOH . 
D 4 HOH A 40 2140 7 HOH HOH . 
D 4 HOH A 41 2141 122 HOH HOH . 
D 4 HOH A 42 2142 46 HOH HOH . 
D 4 HOH A 43 2143 2 HOH HOH . 
D 4 HOH A 44 2144 116 HOH HOH . 
D 4 HOH A 45 2145 76 HOH HOH . 
D 4 HOH A 46 2146 93 HOH HOH . 
D 4 HOH A 47 2147 5 HOH HOH . 
D 4 HOH A 48 2148 36 HOH HOH . 
D 4 HOH A 49 2149 156 HOH HOH . 
D 4 HOH A 50 2150 113 HOH HOH . 
D 4 HOH A 51 2151 107 HOH HOH . 
D 4 HOH A 52 2152 143 HOH HOH . 
D 4 HOH A 53 2153 64 HOH HOH . 
D 4 HOH A 54 2154 38 HOH HOH . 
D 4 HOH A 55 2155 37 HOH HOH . 
D 4 HOH A 56 2156 140 HOH HOH . 
D 4 HOH A 57 2157 47 HOH HOH . 
D 4 HOH A 58 2158 114 HOH HOH . 
D 4 HOH A 59 2159 42 HOH HOH . 
D 4 HOH A 60 2160 130 HOH HOH . 
D 4 HOH A 61 2161 85 HOH HOH . 
D 4 HOH A 62 2162 59 HOH HOH . 
D 4 HOH A 63 2163 144 HOH HOH . 
D 4 HOH A 64 2164 137 HOH HOH . 
D 4 HOH A 65 2165 8 HOH HOH . 
D 4 HOH A 66 2166 52 HOH HOH . 
D 4 HOH A 67 2167 4 HOH HOH . 
D 4 HOH A 68 2168 72 HOH HOH . 
D 4 HOH A 69 2169 26 HOH HOH . 
D 4 HOH A 70 2170 88 HOH HOH . 
D 4 HOH A 71 2171 60 HOH HOH . 
D 4 HOH A 72 2172 41 HOH HOH . 
D 4 HOH A 73 2173 12 HOH HOH . 
D 4 HOH A 74 2174 160 HOH HOH . 
D 4 HOH A 75 2175 112 HOH HOH . 
D 4 HOH A 76 2176 134 HOH HOH . 
D 4 HOH A 77 2177 121 HOH HOH . 
D 4 HOH A 78 2178 141 HOH HOH . 
D 4 HOH A 79 2179 48 HOH HOH . 
D 4 HOH A 80 2180 101 HOH HOH . 
D 4 HOH A 81 2181 154 HOH HOH . 
D 4 HOH A 82 2182 90 HOH HOH . 
D 4 HOH A 83 2183 70 HOH HOH . 
D 4 HOH A 84 2184 54 HOH HOH . 
E 4 HOH B 1 501 73 HOH HOH . 
E 4 HOH B 2 502 18 HOH HOH . 
E 4 HOH B 3 503 136 HOH HOH . 
E 4 HOH B 4 504 155 HOH HOH . 
E 4 HOH B 5 505 56 HOH HOH . 
E 4 HOH B 6 506 150 HOH HOH . 
E 4 HOH B 7 507 22 HOH HOH . 
E 4 HOH B 8 508 151 HOH HOH . 
E 4 HOH B 9 509 98 HOH HOH . 
E 4 HOH B 10 510 69 HOH HOH . 
E 4 HOH B 11 511 75 HOH HOH . 
E 4 HOH B 12 512 120 HOH HOH . 
E 4 HOH B 13 513 95 HOH HOH . 
E 4 HOH B 14 514 84 HOH HOH . 
E 4 HOH B 15 515 24 HOH HOH . 
E 4 HOH B 16 516 20 HOH HOH . 
E 4 HOH B 17 517 132 HOH HOH . 
E 4 HOH B 18 518 104 HOH HOH . 
E 4 HOH B 19 519 127 HOH HOH . 
E 4 HOH B 20 520 102 HOH HOH . 
E 4 HOH B 21 521 147 HOH HOH . 
E 4 HOH B 22 522 146 HOH HOH . 
E 4 HOH B 23 523 128 HOH HOH . 
E 4 HOH B 24 524 28 HOH HOH . 
E 4 HOH B 25 525 11 HOH HOH . 
E 4 HOH B 26 526 133 HOH HOH . 
E 4 HOH B 27 527 78 HOH HOH . 
E 4 HOH B 28 528 97 HOH HOH . 
E 4 HOH B 29 529 50 HOH HOH . 
E 4 HOH B 30 530 111 HOH HOH . 
E 4 HOH B 31 531 29 HOH HOH . 
E 4 HOH B 32 532 86 HOH HOH . 
E 4 HOH B 33 533 126 HOH HOH . 
E 4 HOH B 34 534 63 HOH HOH . 
E 4 HOH B 35 535 16 HOH HOH . 
E 4 HOH B 36 536 103 HOH HOH . 
E 4 HOH B 37 537 17 HOH HOH . 
E 4 HOH B 38 538 32 HOH HOH . 
E 4 HOH B 39 539 45 HOH HOH . 
E 4 HOH B 40 540 142 HOH HOH . 
E 4 HOH B 41 541 71 HOH HOH . 
E 4 HOH B 42 542 139 HOH HOH . 
E 4 HOH B 43 543 65 HOH HOH . 
E 4 HOH B 44 544 91 HOH HOH . 
E 4 HOH B 45 545 44 HOH HOH . 
E 4 HOH B 46 546 13 HOH HOH . 
E 4 HOH B 47 547 125 HOH HOH . 
E 4 HOH B 48 548 117 HOH HOH . 
E 4 HOH B 49 549 27 HOH HOH . 
E 4 HOH B 50 550 57 HOH HOH . 
E 4 HOH B 51 551 81 HOH HOH . 
E 4 HOH B 52 552 53 HOH HOH . 
E 4 HOH B 53 553 96 HOH HOH . 
E 4 HOH B 54 554 66 HOH HOH . 
E 4 HOH B 55 555 99 HOH HOH . 
E 4 HOH B 56 556 58 HOH HOH . 
E 4 HOH B 57 557 79 HOH HOH . 
E 4 HOH B 58 558 35 HOH HOH . 
E 4 HOH B 59 559 94 HOH HOH . 
E 4 HOH B 60 560 124 HOH HOH . 
E 4 HOH B 61 561 33 HOH HOH . 
E 4 HOH B 62 562 89 HOH HOH . 
E 4 HOH B 63 563 159 HOH HOH . 
E 4 HOH B 64 564 31 HOH HOH . 
E 4 HOH B 65 565 39 HOH HOH . 
E 4 HOH B 66 566 49 HOH HOH . 
E 4 HOH B 67 567 119 HOH HOH . 
E 4 HOH B 68 568 105 HOH HOH . 
E 4 HOH B 69 569 153 HOH HOH . 
E 4 HOH B 70 570 25 HOH HOH . 
E 4 HOH B 71 571 30 HOH HOH . 
E 4 HOH B 72 572 149 HOH HOH . 
E 4 HOH B 73 573 83 HOH HOH . 
E 4 HOH B 74 574 158 HOH HOH . 
E 4 HOH B 75 575 145 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 VPE . . . C 3 -1.794 11.868 -34.63 0.36 20 0 N1 VPE 401 B 1 
HETATM 2 C C7 VPE . . . C 3 -6.896 16.129 -33.121 0.36 20 0 C7 VPE 401 B 1 
HETATM 3 C C8 VPE . . . C 3 -7.387 14.701 -32.694 0.36 20 0 C8 VPE 401 B 1 
HETATM 4 O O1 VPE . . . C 3 -7.217 13.772 -33.512 0.36 20 0 O1 VPE 401 B 1 
HETATM 5 C C1 VPE . . . C 3 -5.606 16.003 -33.93 0.36 20 0 C1 VPE 401 B 1 
HETATM 6 C C5 VPE . . . C 3 -0.817 11.613 -35.593 0.36 20 0 C5 VPE 401 B 1 
HETATM 7 C C6 VPE . . . C 3 -0.075 12.686 -35.97 0.36 20 0 C6 VPE 401 B 1 
HETATM 8 C C4 VPE . . . C 3 -1.746 13.171 -34.31 0.36 20 0 C4 VPE 401 B 1 
HETATM 9 C C3 VPE . . . C 3 -3.245 14.992 -33.842 0.36 20 0 C3 VPE 401 B 1 
HETATM 10 C C2 VPE . . . C 3 -4.478 15.415 -33.087 0.36 20 0 C2 VPE 401 B 1 
HETATM 11 O O2 VPE . . . C 3 -7.92 14.604 -31.548 0.36 20 -1 O2 VPE 401 B 1 
HETATM 12 C C VPE . . . C 3 -5.162 17.383 -34.416 0.36 20 0 C VPE 401 B 1 
HETATM 13 O O VPE . . . C 3 -2.821 15.632 -34.777 0.36 20 0 O VPE 401 B 1 
HETATM 14 N N VPE . . . C 3 -2.579 13.821 -33.432 0.36 20 0 N VPE 401 B 1 
HETATM 15 S S VPE . . . C 3 -0.512 14.127 -35.17 0.36 20 0 S VPE 401 B 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           270 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           15 
#