data_7FOD # _model_server_result.job_id aApWXMCiz_SL0CncqvspVw _model_server_result.datetime_utc '2024-10-11 02:22:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7fod # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 7FOD # _exptl.entry_id 7FOD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 139.152 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(1-methyl-1H-pyrrol-2-yl)acetic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.49 _cell.angle_gamma 90 _cell.entry_id 7FOD _cell.length_a 89.163 _cell.length_b 81.841 _cell.length_c 93.6 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7FOD _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C7 H9 N O2' _chem_comp.formula_weight 139.152 _chem_comp.id W5H _chem_comp.mon_nstd_flag . _chem_comp.name '(1-methyl-1H-pyrrol-2-yl)acetic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C6 W5H doub 376 n n C6 O W5H sing 377 n n C6 C5 W5H sing 378 n n C5 C4 W5H sing 379 n n C3 C4 W5H doub 380 n y C3 C2 W5H sing 381 n y C4 N W5H sing 382 n y C2 C1 W5H doub 383 n y N C W5H sing 384 n n N C1 W5H sing 385 n y C1 H1 W5H sing 386 n n C5 H2 W5H sing 387 n n C5 H3 W5H sing 388 n n C3 H4 W5H sing 389 n n C2 H5 W5H sing 390 n n O H6 W5H sing 391 n n C H7 W5H sing 392 n n C H8 W5H sing 393 n n C H9 W5H sing 394 n n # _atom_sites.entry_id 7FOD _atom_sites.fract_transf_matrix[1][1] 0.011215 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00375 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012219 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011265 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 W5H B 1 401 401 W5H XXX . D 4 HOH A 1 2101 87 HOH HOH . D 4 HOH A 2 2102 79 HOH HOH . D 4 HOH A 3 2103 34 HOH HOH . D 4 HOH A 4 2104 21 HOH HOH . D 4 HOH A 5 2105 112 HOH HOH . D 4 HOH A 6 2106 83 HOH HOH . D 4 HOH A 7 2107 3 HOH HOH . D 4 HOH A 8 2108 18 HOH HOH . D 4 HOH A 9 2109 13 HOH HOH . D 4 HOH A 10 2110 23 HOH HOH . D 4 HOH A 11 2111 92 HOH HOH . D 4 HOH A 12 2112 22 HOH HOH . D 4 HOH A 13 2113 7 HOH HOH . D 4 HOH A 14 2114 95 HOH HOH . D 4 HOH A 15 2115 4 HOH HOH . D 4 HOH A 16 2116 53 HOH HOH . D 4 HOH A 17 2117 17 HOH HOH . D 4 HOH A 18 2118 80 HOH HOH . D 4 HOH A 19 2119 99 HOH HOH . D 4 HOH A 20 2120 25 HOH HOH . D 4 HOH A 21 2121 96 HOH HOH . D 4 HOH A 22 2122 75 HOH HOH . D 4 HOH A 23 2123 84 HOH HOH . D 4 HOH A 24 2124 74 HOH HOH . D 4 HOH A 25 2125 109 HOH HOH . D 4 HOH A 26 2126 6 HOH HOH . D 4 HOH A 27 2127 16 HOH HOH . D 4 HOH A 28 2128 93 HOH HOH . D 4 HOH A 29 2129 52 HOH HOH . D 4 HOH A 30 2130 44 HOH HOH . D 4 HOH A 31 2131 43 HOH HOH . D 4 HOH A 32 2132 41 HOH HOH . D 4 HOH A 33 2133 76 HOH HOH . D 4 HOH A 34 2134 73 HOH HOH . D 4 HOH A 35 2135 15 HOH HOH . D 4 HOH A 36 2136 9 HOH HOH . D 4 HOH A 37 2137 11 HOH HOH . D 4 HOH A 38 2138 46 HOH HOH . D 4 HOH A 39 2139 38 HOH HOH . D 4 HOH A 40 2140 59 HOH HOH . D 4 HOH A 41 2141 94 HOH HOH . D 4 HOH A 42 2142 49 HOH HOH . D 4 HOH A 43 2143 65 HOH HOH . D 4 HOH A 44 2144 86 HOH HOH . D 4 HOH A 45 2145 33 HOH HOH . D 4 HOH A 46 2146 50 HOH HOH . D 4 HOH A 47 2147 37 HOH HOH . D 4 HOH A 48 2148 27 HOH HOH . D 4 HOH A 49 2149 81 HOH HOH . D 4 HOH A 50 2150 82 HOH HOH . D 4 HOH A 51 2151 67 HOH HOH . D 4 HOH A 52 2152 107 HOH HOH . E 4 HOH B 1 501 69 HOH HOH . E 4 HOH B 2 502 78 HOH HOH . E 4 HOH B 3 503 62 HOH HOH . E 4 HOH B 4 504 14 HOH HOH . E 4 HOH B 5 505 48 HOH HOH . E 4 HOH B 6 506 55 HOH HOH . E 4 HOH B 7 507 2 HOH HOH . E 4 HOH B 8 508 24 HOH HOH . E 4 HOH B 9 509 110 HOH HOH . E 4 HOH B 10 510 20 HOH HOH . E 4 HOH B 11 511 89 HOH HOH . E 4 HOH B 12 512 39 HOH HOH . E 4 HOH B 13 513 58 HOH HOH . E 4 HOH B 14 514 10 HOH HOH . E 4 HOH B 15 515 70 HOH HOH . E 4 HOH B 16 516 85 HOH HOH . E 4 HOH B 17 517 105 HOH HOH . E 4 HOH B 18 518 97 HOH HOH . E 4 HOH B 19 519 57 HOH HOH . E 4 HOH B 20 520 45 HOH HOH . E 4 HOH B 21 521 90 HOH HOH . E 4 HOH B 22 522 51 HOH HOH . E 4 HOH B 23 523 100 HOH HOH . E 4 HOH B 24 524 106 HOH HOH . E 4 HOH B 25 525 91 HOH HOH . E 4 HOH B 26 526 54 HOH HOH . E 4 HOH B 27 527 114 HOH HOH . E 4 HOH B 28 528 40 HOH HOH . E 4 HOH B 29 529 29 HOH HOH . E 4 HOH B 30 530 8 HOH HOH . E 4 HOH B 31 531 101 HOH HOH . E 4 HOH B 32 532 32 HOH HOH . E 4 HOH B 33 533 61 HOH HOH . E 4 HOH B 34 534 26 HOH HOH . E 4 HOH B 35 535 30 HOH HOH . E 4 HOH B 36 536 56 HOH HOH . E 4 HOH B 37 537 35 HOH HOH . E 4 HOH B 38 538 66 HOH HOH . E 4 HOH B 39 539 68 HOH HOH . E 4 HOH B 40 540 36 HOH HOH . E 4 HOH B 41 541 104 HOH HOH . E 4 HOH B 42 542 103 HOH HOH . E 4 HOH B 43 543 42 HOH HOH . E 4 HOH B 44 544 72 HOH HOH . E 4 HOH B 45 545 19 HOH HOH . E 4 HOH B 46 546 12 HOH HOH . E 4 HOH B 47 547 111 HOH HOH . E 4 HOH B 48 548 63 HOH HOH . E 4 HOH B 49 549 31 HOH HOH . E 4 HOH B 50 550 28 HOH HOH . E 4 HOH B 51 551 5 HOH HOH . E 4 HOH B 52 552 77 HOH HOH . E 4 HOH B 53 553 47 HOH HOH . E 4 HOH B 54 554 108 HOH HOH . E 4 HOH B 55 555 71 HOH HOH . E 4 HOH B 56 556 64 HOH HOH . E 4 HOH B 57 557 113 HOH HOH . E 4 HOH B 58 558 98 HOH HOH . E 4 HOH B 59 559 88 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 W5H . . . C 3 25.595 -3.454 16.782 0.34 20 -1 O1 W5H 401 B 1 HETATM 2 C C1 W5H . . . C 3 28.549 -1.721 21.308 0.34 20 0 C1 W5H 401 B 1 HETATM 3 C C5 W5H . . . C 3 27.182 -3.71 18.533 0.34 20 0 C5 W5H 401 B 1 HETATM 4 C C6 W5H . . . C 3 26.106 -2.894 17.754 0.34 20 0 C6 W5H 401 B 1 HETATM 5 C C4 W5H . . . C 3 28.004 -2.863 19.421 0.34 20 0 C4 W5H 401 B 1 HETATM 6 C C3 W5H . . . C 3 29.279 -2.396 19.272 0.34 20 0 C3 W5H 401 B 1 HETATM 7 C C2 W5H . . . C 3 29.628 -1.686 20.447 0.34 20 0 C2 W5H 401 B 1 HETATM 8 O O W5H . . . C 3 25.859 -1.748 18.138 0.34 20 0 O W5H 401 B 1 HETATM 9 N N W5H . . . C 3 27.549 -2.44 20.669 0.34 20 0 N W5H 401 B 1 HETATM 10 C C W5H . . . C 3 26.231 -2.711 21.208 0.34 20 0 C W5H 401 B 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 88 _model_server_stats.query_time_ms 490 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #