data_7FPF # _model_server_result.job_id QTQdH_UIxHEjmkfnQRIphg _model_server_result.datetime_utc '2024-11-14 21:07:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7fpf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 7FPF # _exptl.entry_id 7FPF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 223.225 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'methyl N-(3-hydroxybenzoyl)-N-methylglycinate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.22 _cell.angle_gamma 90 _cell.entry_id 7FPF _cell.length_a 87.459 _cell.length_b 82.034 _cell.length_c 93.528 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7FPF _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C11 H13 N O4' _chem_comp.formula_weight 223.225 _chem_comp.id VEC _chem_comp.mon_nstd_flag . _chem_comp.name 'methyl N-(3-hydroxybenzoyl)-N-methylglycinate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C3 O1 VEC sing 376 n n O1 C2 VEC sing 377 n n C2 O VEC doub 378 n n C2 C1 VEC sing 379 n n C1 N VEC sing 380 n n C N VEC sing 381 n n N C4 VEC sing 382 n n C4 C5 VEC sing 383 n n C4 O2 VEC doub 384 n n C6 C5 VEC doub 385 n y C6 C7 VEC sing 386 n y C5 C10 VEC sing 387 n y C7 C8 VEC doub 388 n y C10 C9 VEC doub 389 n y C8 C9 VEC sing 390 n y C9 O3 VEC sing 391 n n C7 H1 VEC sing 392 n n C8 H2 VEC sing 393 n n C1 H3 VEC sing 394 n n C1 H4 VEC sing 395 n n C6 H5 VEC sing 396 n n C3 H6 VEC sing 397 n n C3 H7 VEC sing 398 n n C3 H8 VEC sing 399 n n O3 H9 VEC sing 400 n n C H10 VEC sing 401 n n C H11 VEC sing 402 n n C H12 VEC sing 403 n n C10 H13 VEC sing 404 n n # _atom_sites.entry_id 7FPF _atom_sites.fract_transf_matrix[1][1] 0.011434 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003764 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01219 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011256 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 VEC B 1 401 401 VEC XXX . D 4 HOH A 1 2101 59 HOH HOH . D 4 HOH A 2 2102 21 HOH HOH . D 4 HOH A 3 2103 46 HOH HOH . D 4 HOH A 4 2104 58 HOH HOH . D 4 HOH A 5 2105 60 HOH HOH . D 4 HOH A 6 2106 15 HOH HOH . D 4 HOH A 7 2107 3 HOH HOH . D 4 HOH A 8 2108 11 HOH HOH . D 4 HOH A 9 2109 38 HOH HOH . D 4 HOH A 10 2110 17 HOH HOH . D 4 HOH A 11 2111 18 HOH HOH . D 4 HOH A 12 2112 12 HOH HOH . D 4 HOH A 13 2113 2 HOH HOH . D 4 HOH A 14 2114 9 HOH HOH . D 4 HOH A 15 2115 56 HOH HOH . D 4 HOH A 16 2116 26 HOH HOH . D 4 HOH A 17 2117 10 HOH HOH . D 4 HOH A 18 2118 8 HOH HOH . D 4 HOH A 19 2119 27 HOH HOH . D 4 HOH A 20 2120 29 HOH HOH . D 4 HOH A 21 2121 25 HOH HOH . D 4 HOH A 22 2122 20 HOH HOH . D 4 HOH A 23 2123 37 HOH HOH . D 4 HOH A 24 2124 32 HOH HOH . D 4 HOH A 25 2125 16 HOH HOH . D 4 HOH A 26 2126 34 HOH HOH . D 4 HOH A 27 2127 36 HOH HOH . D 4 HOH A 28 2128 13 HOH HOH . D 4 HOH A 29 2129 19 HOH HOH . D 4 HOH A 30 2130 28 HOH HOH . D 4 HOH A 31 2131 54 HOH HOH . D 4 HOH A 32 2132 53 HOH HOH . D 4 HOH A 33 2133 50 HOH HOH . E 4 HOH B 1 501 40 HOH HOH . E 4 HOH B 2 502 41 HOH HOH . E 4 HOH B 3 503 4 HOH HOH . E 4 HOH B 4 504 47 HOH HOH . E 4 HOH B 5 505 45 HOH HOH . E 4 HOH B 6 506 30 HOH HOH . E 4 HOH B 7 507 55 HOH HOH . E 4 HOH B 8 508 48 HOH HOH . E 4 HOH B 9 509 7 HOH HOH . E 4 HOH B 10 510 5 HOH HOH . E 4 HOH B 11 511 33 HOH HOH . E 4 HOH B 12 512 43 HOH HOH . E 4 HOH B 13 513 52 HOH HOH . E 4 HOH B 14 514 31 HOH HOH . E 4 HOH B 15 515 51 HOH HOH . E 4 HOH B 16 516 22 HOH HOH . E 4 HOH B 17 517 57 HOH HOH . E 4 HOH B 18 518 39 HOH HOH . E 4 HOH B 19 519 24 HOH HOH . E 4 HOH B 20 520 35 HOH HOH . E 4 HOH B 21 521 14 HOH HOH . E 4 HOH B 22 522 42 HOH HOH . E 4 HOH B 23 523 44 HOH HOH . E 4 HOH B 24 524 23 HOH HOH . E 4 HOH B 25 525 6 HOH HOH . E 4 HOH B 26 526 49 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C7 VEC . . . C 3 0.336 12.93 -35.849 0.3 20 0 C7 VEC 401 B 1 HETATM 2 C C8 VEC . . . C 3 -0.555 12.052 -35.285 0.3 20 0 C8 VEC 401 B 1 HETATM 3 C C9 VEC . . . C 3 -1.862 12.475 -35.075 0.3 20 0 C9 VEC 401 B 1 HETATM 4 O O1 VEC . . . C 3 -2.508 18.429 -40.024 0.3 20 0 O1 VEC 401 B 1 HETATM 5 C C1 VEC . . . C 3 -2.803 16.396 -38.529 0.3 20 0 C1 VEC 401 B 1 HETATM 6 C C5 VEC . . . C 3 -1.366 14.623 -35.993 0.3 20 0 C5 VEC 401 B 1 HETATM 7 C C6 VEC . . . C 3 -0.057 14.201 -36.21 0.3 20 0 C6 VEC 401 B 1 HETATM 8 C C4 VEC . . . C 3 -1.773 16.023 -36.319 0.3 20 0 C4 VEC 401 B 1 HETATM 9 C C3 VEC . . . C 3 -1.267 17.92 -40.42 0.3 20 0 C3 VEC 401 B 1 HETATM 10 O O3 VEC . . . C 3 -2.66 11.563 -34.508 0.3 20 0 O3 VEC 401 B 1 HETATM 11 C C2 VEC . . . C 3 -3.261 17.724 -39.131 0.3 20 0 C2 VEC 401 B 1 HETATM 12 O O2 VEC . . . C 3 -2.228 16.764 -35.468 0.3 20 0 O2 VEC 401 B 1 HETATM 13 N N VEC . . . C 3 -1.617 16.475 -37.657 0.3 20 0 N VEC 401 B 1 HETATM 14 O O VEC . . . C 3 -4.325 18.252 -38.898 0.3 20 0 O VEC 401 B 1 HETATM 15 C C VEC . . . C 3 -0.326 16.235 -38.318 0.3 20 0 C VEC 401 B 1 HETATM 16 C C10 VEC . . . C 3 -2.294 13.753 -35.421 0.3 20 0 C10 VEC 401 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 16 #