data_7FPI # _model_server_result.job_id LCkyRXtOjwRNiN2YGsbOAw _model_server_result.datetime_utc '2024-10-11 02:24:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7fpi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 7FPI # _exptl.entry_id 7FPI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.247 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "N,N'-dicyclopropyl-N-(prop-2-en-1-yl)urea" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.5 _cell.angle_gamma 90 _cell.entry_id 7FPI _cell.length_a 87.776 _cell.length_b 81.694 _cell.length_c 93.302 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7FPI _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H16 N2 O' _chem_comp.formula_weight 180.247 _chem_comp.id V1I _chem_comp.mon_nstd_flag . _chem_comp.name "N,N'-dicyclopropyl-N-(prop-2-en-1-yl)urea" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 V1I doub 358 n n C1 C2 V1I sing 359 n n C2 N V1I sing 360 n n C4 C3 V1I sing 361 n n C4 C5 V1I sing 362 n n N C3 V1I sing 363 n n N C6 V1I sing 364 n n C3 C5 V1I sing 365 n n C6 O V1I doub 366 n n C6 N1 V1I sing 367 n n N1 C7 V1I sing 368 n n C7 C8 V1I sing 369 n n C7 C9 V1I sing 370 n n C8 C9 V1I sing 371 n n N1 H1 V1I sing 372 n n C7 H2 V1I sing 373 n n C8 H3 V1I sing 374 n n C8 H4 V1I sing 375 n n C9 H5 V1I sing 376 n n C9 H6 V1I sing 377 n n C1 H7 V1I sing 378 n n C5 H8 V1I sing 379 n n C5 H9 V1I sing 380 n n C4 H10 V1I sing 381 n n C4 H11 V1I sing 382 n n C3 H12 V1I sing 383 n n C2 H13 V1I sing 384 n n C2 H14 V1I sing 385 n n C H15 V1I sing 386 n n C H16 V1I sing 387 n n # _atom_sites.entry_id 7FPI _atom_sites.fract_transf_matrix[1][1] 0.011393 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003812 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012241 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011302 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 V1I B 1 401 401 V1I XXX . D 4 HOH A 1 2101 46 HOH HOH . D 4 HOH A 2 2102 45 HOH HOH . D 4 HOH A 3 2103 76 HOH HOH . D 4 HOH A 4 2104 11 HOH HOH . D 4 HOH A 5 2105 10 HOH HOH . D 4 HOH A 6 2106 58 HOH HOH . D 4 HOH A 7 2107 75 HOH HOH . D 4 HOH A 8 2108 31 HOH HOH . D 4 HOH A 9 2109 5 HOH HOH . D 4 HOH A 10 2110 56 HOH HOH . D 4 HOH A 11 2111 8 HOH HOH . D 4 HOH A 12 2112 2 HOH HOH . D 4 HOH A 13 2113 50 HOH HOH . D 4 HOH A 14 2114 48 HOH HOH . D 4 HOH A 15 2115 20 HOH HOH . D 4 HOH A 16 2116 24 HOH HOH . D 4 HOH A 17 2117 34 HOH HOH . D 4 HOH A 18 2118 47 HOH HOH . D 4 HOH A 19 2119 66 HOH HOH . D 4 HOH A 20 2120 4 HOH HOH . D 4 HOH A 21 2121 19 HOH HOH . D 4 HOH A 22 2122 12 HOH HOH . D 4 HOH A 23 2123 13 HOH HOH . D 4 HOH A 24 2124 22 HOH HOH . D 4 HOH A 25 2125 15 HOH HOH . D 4 HOH A 26 2126 64 HOH HOH . D 4 HOH A 27 2127 21 HOH HOH . D 4 HOH A 28 2128 14 HOH HOH . D 4 HOH A 29 2129 25 HOH HOH . D 4 HOH A 30 2130 49 HOH HOH . D 4 HOH A 31 2131 6 HOH HOH . D 4 HOH A 32 2132 44 HOH HOH . D 4 HOH A 33 2133 40 HOH HOH . D 4 HOH A 34 2134 36 HOH HOH . D 4 HOH A 35 2135 23 HOH HOH . D 4 HOH A 36 2136 28 HOH HOH . D 4 HOH A 37 2137 52 HOH HOH . D 4 HOH A 38 2138 57 HOH HOH . D 4 HOH A 39 2139 51 HOH HOH . D 4 HOH A 40 2140 38 HOH HOH . D 4 HOH A 41 2141 7 HOH HOH . D 4 HOH A 42 2142 16 HOH HOH . D 4 HOH A 43 2143 53 HOH HOH . D 4 HOH A 44 2144 74 HOH HOH . D 4 HOH A 45 2145 73 HOH HOH . D 4 HOH A 46 2146 29 HOH HOH . D 4 HOH A 47 2147 59 HOH HOH . E 4 HOH B 1 501 63 HOH HOH . E 4 HOH B 2 502 3 HOH HOH . E 4 HOH B 3 503 42 HOH HOH . E 4 HOH B 4 504 69 HOH HOH . E 4 HOH B 5 505 26 HOH HOH . E 4 HOH B 6 506 70 HOH HOH . E 4 HOH B 7 507 30 HOH HOH . E 4 HOH B 8 508 9 HOH HOH . E 4 HOH B 9 509 67 HOH HOH . E 4 HOH B 10 510 41 HOH HOH . E 4 HOH B 11 511 60 HOH HOH . E 4 HOH B 12 512 68 HOH HOH . E 4 HOH B 13 513 71 HOH HOH . E 4 HOH B 14 514 39 HOH HOH . E 4 HOH B 15 515 27 HOH HOH . E 4 HOH B 16 516 62 HOH HOH . E 4 HOH B 17 517 78 HOH HOH . E 4 HOH B 18 518 55 HOH HOH . E 4 HOH B 19 519 18 HOH HOH . E 4 HOH B 20 520 61 HOH HOH . E 4 HOH B 21 521 77 HOH HOH . E 4 HOH B 22 522 54 HOH HOH . E 4 HOH B 23 523 72 HOH HOH . E 4 HOH B 24 524 37 HOH HOH . E 4 HOH B 25 525 43 HOH HOH . E 4 HOH B 26 526 17 HOH HOH . E 4 HOH B 27 527 33 HOH HOH . E 4 HOH B 28 528 65 HOH HOH . E 4 HOH B 29 529 32 HOH HOH . E 4 HOH B 30 530 35 HOH HOH . E 4 HOH B 31 531 79 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 V1I . . . C 3 26.784 16.173 -11.519 0.5 20 0 N1 V1I 401 B 1 HETATM 2 C C7 V1I . . . C 3 27.701 16.647 -10.533 0.5 20 0 C7 V1I 401 B 1 HETATM 3 C C8 V1I . . . C 3 29.141 16.148 -10.513 0.5 20 0 C8 V1I 401 B 1 HETATM 4 C C9 V1I . . . C 3 28.178 15.708 -9.45 0.5 20 0 C9 V1I 401 B 1 HETATM 5 C C1 V1I . . . C 3 24.57 18.062 -14.973 0.5 20 0 C1 V1I 401 B 1 HETATM 6 C C5 V1I . . . C 3 24.472 14.13 -12.597 0.5 20 0 C5 V1I 401 B 1 HETATM 7 C C6 V1I . . . C 3 25.91 17.086 -12.096 0.5 20 0 C6 V1I 401 B 1 HETATM 8 C C4 V1I . . . C 3 23.633 14.56 -13.753 0.5 20 0 C4 V1I 401 B 1 HETATM 9 C C3 V1I . . . C 3 24.073 15.59 -12.735 0.5 20 0 C3 V1I 401 B 1 HETATM 10 C C2 V1I . . . C 3 25.338 16.919 -14.426 0.5 20 0 C2 V1I 401 B 1 HETATM 11 O O V1I . . . C 3 25.911 18.262 -11.805 0.5 20 0 O V1I 401 B 1 HETATM 12 N N V1I . . . C 3 25.024 16.627 -13.038 0.5 20 0 N V1I 401 B 1 HETATM 13 C C V1I . . . C 3 24.311 18.127 -16.256 0.5 20 0 C V1I 401 B 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 13 #