data_7FQH
#
_model_server_result.job_id            sZKtnTYk8BG5vs9xe8BTqA 
_model_server_result.datetime_utc      '2024-11-05 15:28:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7fqh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":501}' 
#
_entry.id    7FQH 
#
_exptl.entry_id    7FQH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              425.521 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-[(3S)-5-amino-5-oxopent-1-en-3-yl]-1-{1-[4-(cyclopropylmethoxy)phenyl]cyclopropane-1-carbonyl}-L-prolinamide 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7FQH 
_cell.length_a            117.798 
_cell.length_b            117.798 
_cell.length_c            102.812 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7FQH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        150 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 3 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,F,K 1 1 
B,G,H,I,L 2 1 
C,J 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 D N N 
? 2 G N N 
? 2 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C THR 147 A THR 146 1_555 A N SNN 148 A SNN 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? 
covale ? covale2 A C SNN 148 A SNN 147 1_555 A N HIS 149 A HIS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.294 ? 
covale ? covale3 A C5 SNN 148 A SNN 147 1_555 A N HIS 149 A HIS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.3 ? 
covale ? covale4 A ND2 ASN 168 A ASN 167 1_555 F C1 NAG . A NAG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? 
covale ? covale5 A SG CYS 190 A CYS 189 1_555 D C8 WR9 . A WR9 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.776 ? 
covale ? covale6 B C THR 147 B THR 146 1_555 B N SNN 148 B SNN 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? 
covale ? covale7 B C SNN 148 B SNN 147 1_555 B N HIS 149 B HIS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.287 ? 
covale ? covale8 B C5 SNN 148 B SNN 147 1_555 B N HIS 149 B HIS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.296 ? 
covale ? covale9 B ND2 ASN 168 B ASN 167 1_555 H C1 NAG . B NAG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? 
covale ? covale10 B SG CYS 190 B CYS 189 1_555 G C8 WR9 . B WR9 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.726 ? 
covale ? covale11 C C THR 147 D THR 146 1_555 C N SNN 148 D SNN 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? 
covale ? covale12 C C SNN 148 D SNN 147 1_555 C N HIS 149 D HIS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.275 ? 
covale ? covale13 C C5 SNN 148 D SNN 147 1_555 C N HIS 149 D HIS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.271 ? 
covale ? covale14 C SG CYS 190 D CYS 189 1_555 J C8 WR9 . D WR9 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.895 ? 
#
_chem_comp.formula           'C24 H31 N3 O4' 
_chem_comp.formula_weight    425.521 
_chem_comp.id                WR9 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-[(3S)-5-amino-5-oxopent-1-en-3-yl]-1-{1-[4-(cyclopropylmethoxy)phenyl]cyclopropane-1-carbonyl}-L-prolinamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 WR9 sing 429 n n 
C1 C31 WR9 sing 430 n n 
C2 C3 WR9 sing 431 n n 
C3 C4 WR9 sing 432 n n 
C3 N14 WR9 sing 433 n n 
C4 O5 WR9 doub 434 n n 
C4 N6 WR9 sing 435 n n 
N6 C7 WR9 sing 436 n n 
C7 C8 WR9 sing 437 n n 
C7 C10 WR9 sing 438 n n 
C8 C9 WR9 doub 439 n n 
C10 C11 WR9 sing 440 n n 
C11 N12 WR9 sing 441 n n 
C11 O13 WR9 doub 442 n n 
N14 C15 WR9 sing 443 n n 
N14 C31 WR9 sing 444 n n 
C15 O16 WR9 doub 445 n n 
C15 C17 WR9 sing 446 n n 
C17 C18 WR9 sing 447 n n 
C17 C19 WR9 sing 448 n n 
C17 C20 WR9 sing 449 n n 
C18 C19 WR9 sing 450 n n 
C20 C21 WR9 doub 451 n y 
C20 C30 WR9 sing 452 n y 
C21 C22 WR9 sing 453 n y 
C22 C23 WR9 doub 454 n y 
C23 O24 WR9 sing 455 n n 
C23 C29 WR9 sing 456 n y 
O24 C25 WR9 sing 457 n n 
C25 C26 WR9 sing 458 n n 
C26 C27 WR9 sing 459 n n 
C26 C28 WR9 sing 460 n n 
C27 C28 WR9 sing 461 n n 
C29 C30 WR9 doub 462 n y 
C10 H41 WR9 sing 463 n n 
C10 H40 WR9 sing 464 n n 
C18 H45 WR9 sing 465 n n 
C18 H44 WR9 sing 466 n n 
C19 H46 WR9 sing 467 n n 
C19 H47 WR9 sing 468 n n 
C21 H48 WR9 sing 469 n n 
C22 H49 WR9 sing 470 n n 
C25 H50 WR9 sing 471 n n 
C25 H51 WR9 sing 472 n n 
C26 H52 WR9 sing 473 n n 
C27 H54 WR9 sing 474 n n 
C27 H53 WR9 sing 475 n n 
C28 H55 WR9 sing 476 n n 
C28 H56 WR9 sing 477 n n 
C1 H32 WR9 sing 478 n n 
C1 H33 WR9 sing 479 n n 
C2 H35 WR9 sing 480 n n 
C2 H34 WR9 sing 481 n n 
C3 H36 WR9 sing 482 n n 
N6 H37 WR9 sing 483 n n 
C7 H38 WR9 sing 484 n n 
C8 H1 WR9 sing 485 n n 
C9 H91 WR9 sing 486 n n 
C9 H92 WR9 sing 487 n n 
N12 H43 WR9 sing 488 n n 
N12 H42 WR9 sing 489 n n 
C29 H57 WR9 sing 490 n n 
C30 H58 WR9 sing 491 n n 
C31 H60 WR9 sing 492 n n 
C31 H59 WR9 sing 493 n n 
#
_atom_sites.entry_id                     7FQH 
_atom_sites.fract_transf_matrix[1][1]    0.008489 
_atom_sites.fract_transf_matrix[1][2]    0.004901 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009802 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009726 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 WR9 A 1 501 301 WR9 L0R . 
E 3 EDO A 1 502 302 EDO EDO . 
F 4 NAG A 1 503 303 NAG NAG . 
G 2 WR9 B 1 501 301 WR9 L0R . 
H 4 NAG B 1 502 302 NAG NAG . 
I 3 EDO B 1 503 303 EDO EDO . 
J 2 WR9 D 1 501 301 WR9 L0R . 
K 5 HOH A 1 601 1 HOH HOH . 
K 5 HOH A 2 602 30 HOH HOH . 
K 5 HOH A 3 603 44 HOH HOH . 
K 5 HOH A 4 604 9 HOH HOH . 
K 5 HOH A 5 605 7 HOH HOH . 
K 5 HOH A 6 606 50 HOH HOH . 
K 5 HOH A 7 607 55 HOH HOH . 
K 5 HOH A 8 608 18 HOH HOH . 
K 5 HOH A 9 609 46 HOH HOH . 
K 5 HOH A 10 610 3 HOH HOH . 
K 5 HOH A 11 611 32 HOH HOH . 
K 5 HOH A 12 612 6 HOH HOH . 
K 5 HOH A 13 613 54 HOH HOH . 
K 5 HOH A 14 614 31 HOH HOH . 
K 5 HOH A 15 615 29 HOH HOH . 
K 5 HOH A 16 616 38 HOH HOH . 
K 5 HOH A 17 617 51 HOH HOH . 
K 5 HOH A 18 618 24 HOH HOH . 
K 5 HOH A 19 619 48 HOH HOH . 
K 5 HOH A 20 620 22 HOH HOH . 
K 5 HOH A 21 621 34 HOH HOH . 
K 5 HOH A 22 622 87 HOH HOH . 
K 5 HOH A 23 623 66 HOH HOH . 
K 5 HOH A 24 624 2 HOH HOH . 
K 5 HOH A 25 625 33 HOH HOH . 
K 5 HOH A 26 626 13 HOH HOH . 
K 5 HOH A 27 627 16 HOH HOH . 
K 5 HOH A 28 628 10 HOH HOH . 
K 5 HOH A 29 629 62 HOH HOH . 
K 5 HOH A 30 630 47 HOH HOH . 
K 5 HOH A 31 631 86 HOH HOH . 
K 5 HOH A 32 632 71 HOH HOH . 
K 5 HOH A 33 633 17 HOH HOH . 
K 5 HOH A 34 634 36 HOH HOH . 
K 5 HOH A 35 635 65 HOH HOH . 
K 5 HOH A 36 636 74 HOH HOH . 
K 5 HOH A 37 637 58 HOH HOH . 
K 5 HOH A 38 638 70 HOH HOH . 
K 5 HOH A 39 639 28 HOH HOH . 
K 5 HOH A 40 640 73 HOH HOH . 
K 5 HOH A 41 641 79 HOH HOH . 
K 5 HOH A 42 642 76 HOH HOH . 
K 5 HOH A 43 643 53 HOH HOH . 
L 5 HOH B 1 601 59 HOH HOH . 
L 5 HOH B 2 602 75 HOH HOH . 
L 5 HOH B 3 603 4 HOH HOH . 
L 5 HOH B 4 604 52 HOH HOH . 
L 5 HOH B 5 605 14 HOH HOH . 
L 5 HOH B 6 606 60 HOH HOH . 
L 5 HOH B 7 607 20 HOH HOH . 
L 5 HOH B 8 608 78 HOH HOH . 
L 5 HOH B 9 609 64 HOH HOH . 
L 5 HOH B 10 610 39 HOH HOH . 
L 5 HOH B 11 611 21 HOH HOH . 
L 5 HOH B 12 612 42 HOH HOH . 
L 5 HOH B 13 613 35 HOH HOH . 
L 5 HOH B 14 614 77 HOH HOH . 
L 5 HOH B 15 615 45 HOH HOH . 
L 5 HOH B 16 616 61 HOH HOH . 
L 5 HOH B 17 617 5 HOH HOH . 
L 5 HOH B 18 618 37 HOH HOH . 
L 5 HOH B 19 619 43 HOH HOH . 
L 5 HOH B 20 620 88 HOH HOH . 
L 5 HOH B 21 621 85 HOH HOH . 
L 5 HOH B 22 622 11 HOH HOH . 
L 5 HOH B 23 623 26 HOH HOH . 
L 5 HOH B 24 624 8 HOH HOH . 
L 5 HOH B 25 625 68 HOH HOH . 
L 5 HOH B 26 626 80 HOH HOH . 
L 5 HOH B 27 627 25 HOH HOH . 
L 5 HOH B 28 628 84 HOH HOH . 
L 5 HOH B 29 629 57 HOH HOH . 
L 5 HOH B 30 630 27 HOH HOH . 
L 5 HOH B 31 631 40 HOH HOH . 
L 5 HOH B 32 632 23 HOH HOH . 
L 5 HOH B 33 633 72 HOH HOH . 
L 5 HOH B 34 634 12 HOH HOH . 
L 5 HOH B 35 635 15 HOH HOH . 
L 5 HOH B 36 636 69 HOH HOH . 
L 5 HOH B 37 637 81 HOH HOH . 
L 5 HOH B 38 638 83 HOH HOH . 
L 5 HOH B 39 639 19 HOH HOH . 
L 5 HOH B 40 640 41 HOH HOH . 
L 5 HOH B 41 641 56 HOH HOH . 
L 5 HOH B 42 642 49 HOH HOH . 
L 5 HOH B 43 643 67 HOH HOH . 
L 5 HOH B 44 644 82 HOH HOH . 
L 5 HOH B 45 645 63 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 WR9 . . . D 2 10.118 3.238 29.173 1 25.51 ? C10 WR9 501 A 1 
HETATM 2 C C11 WR9 . . . D 2 10.635 3.113 27.757 1 25.4 ? C11 WR9 501 A 1 
HETATM 3 C C15 WR9 . . . D 2 5.945 2.701 24.968 1 37.51 ? C15 WR9 501 A 1 
HETATM 4 C C17 WR9 . . . D 2 5.419 2.267 23.589 1 40.85 ? C17 WR9 501 A 1 
HETATM 5 C C18 WR9 . . . D 2 4.334 3.149 22.975 1 40.73 ? C18 WR9 501 A 1 
HETATM 6 C C19 WR9 . . . D 2 5.724 3.235 22.448 1 40.97 ? C19 WR9 501 A 1 
HETATM 7 C C20 WR9 . . . D 2 5.552 0.776 23.296 1 43.44 ? C20 WR9 501 A 1 
HETATM 8 C C21 WR9 . . . D 2 6.796 0.155 23.291 1 43.9 ? C21 WR9 501 A 1 
HETATM 9 C C22 WR9 . . . D 2 6.92 -1.194 23.012 1 45.96 ? C22 WR9 501 A 1 
HETATM 10 C C23 WR9 . . . D 2 5.791 -1.943 22.728 1 46.95 ? C23 WR9 501 A 1 
HETATM 11 C C25 WR9 . . . D 2 5.228 -4.214 23.289 1 53.12 ? C25 WR9 501 A 1 
HETATM 12 C C26 WR9 . . . D 2 4.634 -5.276 22.393 1 54.93 ? C26 WR9 501 A 1 
HETATM 13 C C27 WR9 . . . D 2 5.385 -5.691 21.165 1 55.7 ? C27 WR9 501 A 1 
HETATM 14 C C28 WR9 . . . D 2 5.29 -6.618 22.334 1 56.41 ? C28 WR9 501 A 1 
HETATM 15 C C1 WR9 . . . D 2 3.712 1.696 27.674 1 34.49 ? C1 WR9 501 A 1 
HETATM 16 C C2 WR9 . . . D 2 4.45 2.877 28.27 1 33.59 ? C2 WR9 501 A 1 
HETATM 17 C C3 WR9 . . . D 2 5.657 3.055 27.345 1 32.35 ? C3 WR9 501 A 1 
HETATM 18 C C4 WR9 . . . D 2 6.873 2.306 27.888 1 29.87 ? C4 WR9 501 A 1 
HETATM 19 O O5 WR9 . . . D 2 6.998 1.099 27.713 1 30.06 ? O5 WR9 501 A 1 
HETATM 20 N N6 WR9 . . . D 2 7.768 3.046 28.547 1 27.29 ? N6 WR9 501 A 1 
HETATM 21 C C7 WR9 . . . D 2 8.808 2.47 29.38 1 25.51 ? C7 WR9 501 A 1 
HETATM 22 C C8 WR9 . . . D 2 8.355 2.497 30.814 1 24.94 ? C8 WR9 501 A 1 
HETATM 23 C C9 WR9 . . . D 2 8.501 1.501 31.639 1 25.09 ? C9 WR9 501 A 1 
HETATM 24 N N12 WR9 . . . D 2 10.98 4.238 27.152 1 25.27 ? N12 WR9 501 A 1 
HETATM 25 O O13 WR9 . . . D 2 10.746 2.006 27.219 1 25.67 ? O13 WR9 501 A 1 
HETATM 26 N N14 WR9 . . . D 2 5.171 2.536 26.058 1 33.81 ? N14 WR9 501 A 1 
HETATM 27 O O16 WR9 . . . D 2 7.048 3.207 25.059 1 36.59 ? O16 WR9 501 A 1 
HETATM 28 O O24 WR9 . . . D 2 5.907 -3.276 22.444 1 48.91 ? O24 WR9 501 A 1 
HETATM 29 C C29 WR9 . . . D 2 4.546 -1.342 22.716 1 46.9 ? C29 WR9 501 A 1 
HETATM 30 C C30 WR9 . . . D 2 4.432 0.007 22.998 1 45.83 ? C30 WR9 501 A 1 
HETATM 31 C C31 WR9 . . . D 2 3.846 1.914 26.182 1 34.92 ? C31 WR9 501 A 1 
#
_model_server_stats.io_time_ms              69 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           329 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           31 
#