data_7FQH # _model_server_result.job_id Ex9gEDuxbDHt-q2vNfYawQ _model_server_result.datetime_utc '2024-11-26 11:13:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7fqh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":503}' # _entry.id 7FQH # _exptl.entry_id 7FQH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 221.208 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-acetamido-2-deoxy-beta-D-glucopyranose _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7FQH _cell.length_a 117.798 _cell.length_b 117.798 _cell.length_c 102.812 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7FQH _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 3 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,K 1 1 B,G,H,I,L 2 1 C,J 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C THR 147 A THR 146 1_555 A N SNN 148 A SNN 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? covale ? covale2 A C SNN 148 A SNN 147 1_555 A N HIS 149 A HIS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.294 ? covale ? covale3 A C5 SNN 148 A SNN 147 1_555 A N HIS 149 A HIS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.3 ? covale ? covale4 A ND2 ASN 168 A ASN 167 1_555 F C1 NAG . A NAG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? covale ? covale5 A SG CYS 190 A CYS 189 1_555 D C8 WR9 . A WR9 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.776 ? covale ? covale6 B C THR 147 B THR 146 1_555 B N SNN 148 B SNN 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale7 B C SNN 148 B SNN 147 1_555 B N HIS 149 B HIS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.287 ? covale ? covale8 B C5 SNN 148 B SNN 147 1_555 B N HIS 149 B HIS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.296 ? covale ? covale9 B ND2 ASN 168 B ASN 167 1_555 H C1 NAG . B NAG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? covale ? covale10 B SG CYS 190 B CYS 189 1_555 G C8 WR9 . B WR9 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.726 ? covale ? covale11 C C THR 147 D THR 146 1_555 C N SNN 148 D SNN 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale12 C C SNN 148 D SNN 147 1_555 C N HIS 149 D HIS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.275 ? covale ? covale13 C C5 SNN 148 D SNN 147 1_555 C N HIS 149 D HIS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.271 ? covale ? covale14 C SG CYS 190 D CYS 189 1_555 J C8 WR9 . D WR9 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.895 ? # _chem_comp.formula 'C8 H15 N O6' _chem_comp.formula_weight 221.208 _chem_comp.id NAG _chem_comp.mon_nstd_flag . _chem_comp.name 2-acetamido-2-deoxy-beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 NAG sing 246 n n C1 O1 NAG sing 247 n n C1 O5 NAG sing 248 n n C1 H1 NAG sing 249 n n C2 C3 NAG sing 250 n n C2 N2 NAG sing 251 n n C2 H2 NAG sing 252 n n C3 C4 NAG sing 253 n n C3 O3 NAG sing 254 n n C3 H3 NAG sing 255 n n C4 C5 NAG sing 256 n n C4 O4 NAG sing 257 n n C4 H4 NAG sing 258 n n C5 C6 NAG sing 259 n n C5 O5 NAG sing 260 n n C5 H5 NAG sing 261 n n C6 O6 NAG sing 262 n n C6 H61 NAG sing 263 n n C6 H62 NAG sing 264 n n C7 C8 NAG sing 265 n n C7 N2 NAG sing 266 n n C7 O7 NAG doub 267 n n C8 H81 NAG sing 268 n n C8 H82 NAG sing 269 n n C8 H83 NAG sing 270 n n N2 HN2 NAG sing 271 n n O1 HO1 NAG sing 272 n n O3 HO3 NAG sing 273 n n O4 HO4 NAG sing 274 n n O6 HO6 NAG sing 275 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 7FQH _atom_sites.fract_transf_matrix[1][1] 0.008489 _atom_sites.fract_transf_matrix[1][2] 0.004901 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009802 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009726 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 WR9 A 1 501 301 WR9 L0R . E 3 EDO A 1 502 302 EDO EDO . F 4 NAG A 1 503 303 NAG NAG . G 2 WR9 B 1 501 301 WR9 L0R . H 4 NAG B 1 502 302 NAG NAG . I 3 EDO B 1 503 303 EDO EDO . J 2 WR9 D 1 501 301 WR9 L0R . K 5 HOH A 1 601 1 HOH HOH . K 5 HOH A 2 602 30 HOH HOH . K 5 HOH A 3 603 44 HOH HOH . K 5 HOH A 4 604 9 HOH HOH . K 5 HOH A 5 605 7 HOH HOH . K 5 HOH A 6 606 50 HOH HOH . K 5 HOH A 7 607 55 HOH HOH . K 5 HOH A 8 608 18 HOH HOH . K 5 HOH A 9 609 46 HOH HOH . K 5 HOH A 10 610 3 HOH HOH . K 5 HOH A 11 611 32 HOH HOH . K 5 HOH A 12 612 6 HOH HOH . K 5 HOH A 13 613 54 HOH HOH . K 5 HOH A 14 614 31 HOH HOH . K 5 HOH A 15 615 29 HOH HOH . K 5 HOH A 16 616 38 HOH HOH . K 5 HOH A 17 617 51 HOH HOH . K 5 HOH A 18 618 24 HOH HOH . K 5 HOH A 19 619 48 HOH HOH . K 5 HOH A 20 620 22 HOH HOH . K 5 HOH A 21 621 34 HOH HOH . K 5 HOH A 22 622 87 HOH HOH . K 5 HOH A 23 623 66 HOH HOH . K 5 HOH A 24 624 2 HOH HOH . K 5 HOH A 25 625 33 HOH HOH . K 5 HOH A 26 626 13 HOH HOH . K 5 HOH A 27 627 16 HOH HOH . K 5 HOH A 28 628 10 HOH HOH . K 5 HOH A 29 629 62 HOH HOH . K 5 HOH A 30 630 47 HOH HOH . K 5 HOH A 31 631 86 HOH HOH . K 5 HOH A 32 632 71 HOH HOH . K 5 HOH A 33 633 17 HOH HOH . K 5 HOH A 34 634 36 HOH HOH . K 5 HOH A 35 635 65 HOH HOH . K 5 HOH A 36 636 74 HOH HOH . K 5 HOH A 37 637 58 HOH HOH . K 5 HOH A 38 638 70 HOH HOH . K 5 HOH A 39 639 28 HOH HOH . K 5 HOH A 40 640 73 HOH HOH . K 5 HOH A 41 641 79 HOH HOH . K 5 HOH A 42 642 76 HOH HOH . K 5 HOH A 43 643 53 HOH HOH . L 5 HOH B 1 601 59 HOH HOH . L 5 HOH B 2 602 75 HOH HOH . L 5 HOH B 3 603 4 HOH HOH . L 5 HOH B 4 604 52 HOH HOH . L 5 HOH B 5 605 14 HOH HOH . L 5 HOH B 6 606 60 HOH HOH . L 5 HOH B 7 607 20 HOH HOH . L 5 HOH B 8 608 78 HOH HOH . L 5 HOH B 9 609 64 HOH HOH . L 5 HOH B 10 610 39 HOH HOH . L 5 HOH B 11 611 21 HOH HOH . L 5 HOH B 12 612 42 HOH HOH . L 5 HOH B 13 613 35 HOH HOH . L 5 HOH B 14 614 77 HOH HOH . L 5 HOH B 15 615 45 HOH HOH . L 5 HOH B 16 616 61 HOH HOH . L 5 HOH B 17 617 5 HOH HOH . L 5 HOH B 18 618 37 HOH HOH . L 5 HOH B 19 619 43 HOH HOH . L 5 HOH B 20 620 88 HOH HOH . L 5 HOH B 21 621 85 HOH HOH . L 5 HOH B 22 622 11 HOH HOH . L 5 HOH B 23 623 26 HOH HOH . L 5 HOH B 24 624 8 HOH HOH . L 5 HOH B 25 625 68 HOH HOH . L 5 HOH B 26 626 80 HOH HOH . L 5 HOH B 27 627 25 HOH HOH . L 5 HOH B 28 628 84 HOH HOH . L 5 HOH B 29 629 57 HOH HOH . L 5 HOH B 30 630 27 HOH HOH . L 5 HOH B 31 631 40 HOH HOH . L 5 HOH B 32 632 23 HOH HOH . L 5 HOH B 33 633 72 HOH HOH . L 5 HOH B 34 634 12 HOH HOH . L 5 HOH B 35 635 15 HOH HOH . L 5 HOH B 36 636 69 HOH HOH . L 5 HOH B 37 637 81 HOH HOH . L 5 HOH B 38 638 83 HOH HOH . L 5 HOH B 39 639 19 HOH HOH . L 5 HOH B 40 640 41 HOH HOH . L 5 HOH B 41 641 56 HOH HOH . L 5 HOH B 42 642 49 HOH HOH . L 5 HOH B 43 643 67 HOH HOH . L 5 HOH B 44 644 82 HOH HOH . L 5 HOH B 45 645 63 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NAG . . . F 4 18.966 11.35 49.859 1 64.7 ? C1 NAG 503 A 1 HETATM 2 C C2 NAG . . . F 4 19.522 12.642 49.213 1 72.27 ? C2 NAG 503 A 1 HETATM 3 C C3 NAG . . . F 4 19.532 13.829 50.198 1 76.01 ? C3 NAG 503 A 1 HETATM 4 C C4 NAG . . . F 4 18.192 13.958 50.924 1 76.35 ? C4 NAG 503 A 1 HETATM 5 C C5 NAG . . . F 4 17.822 12.613 51.552 1 75.98 ? C5 NAG 503 A 1 HETATM 6 C C6 NAG . . . F 4 16.494 12.71 52.299 1 77.59 ? C6 NAG 503 A 1 HETATM 7 C C7 NAG . . . F 4 21.042 11.877 47.424 1 68.68 ? C7 NAG 503 A 1 HETATM 8 C C8 NAG . . . F 4 22.46 11.594 47.036 1 68.08 ? C8 NAG 503 A 1 HETATM 9 N N2 NAG . . . F 4 20.859 12.376 48.656 1 70.97 ? N2 NAG 503 A 1 HETATM 10 O O3 NAG . . . F 4 19.755 15.087 49.555 1 77.66 ? O3 NAG 503 A 1 HETATM 11 O O4 NAG . . . F 4 18.235 15.003 51.919 1 77.17 ? O4 NAG 503 A 1 HETATM 12 O O5 NAG . . . F 4 17.725 11.596 50.539 1 69.12 ? O5 NAG 503 A 1 HETATM 13 O O6 NAG . . . F 4 15.408 12.634 51.36 1 79.2 ? O6 NAG 503 A 1 HETATM 14 O O7 NAG . . . F 4 20.123 11.644 46.644 1 69.06 ? O7 NAG 503 A 1 # _model_server_stats.io_time_ms 76 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 14 #