data_7FQM # _model_server_result.job_id Piy28IwmCTsiYZkTt_fKTQ _model_server_result.datetime_utc '2024-11-16 07:40:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7fqm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":702}' # _entry.id 7FQM # _exptl.entry_id 7FQM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 219.303 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-({[(thiophen-2-yl)methyl]amino}methyl)phenol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7FQM _cell.length_a 89.56 _cell.length_b 89.56 _cell.length_c 106.27 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7FQM _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C12 H13 N O S' _chem_comp.formula_weight 219.303 _chem_comp.id JKG _chem_comp.mon_nstd_flag . _chem_comp.name 4-({[(thiophen-2-yl)methyl]amino}methyl)phenol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S04 C05 JKG sing 173 n y S04 C03 JKG sing 174 n y C13 C14 JKG doub 175 n y C13 C12 JKG sing 176 n y C14 C09 JKG sing 177 n y C05 C01 JKG doub 178 n y O15 C12 JKG sing 179 n n N07 C06 JKG sing 180 n n N07 C08 JKG sing 181 n n C12 C11 JKG doub 182 n y C03 C06 JKG sing 183 n n C03 C02 JKG doub 184 n y C09 C08 JKG sing 185 n n C09 C10 JKG doub 186 n y C01 C02 JKG sing 187 n y C11 C10 JKG sing 188 n y C10 H101 JKG sing 189 n n C13 H131 JKG sing 190 n n C01 H011 JKG sing 191 n n C02 H021 JKG sing 192 n n C05 H051 JKG sing 193 n n C06 H062 JKG sing 194 n n C06 H061 JKG sing 195 n n N07 H071 JKG sing 196 n n C08 H081 JKG sing 197 n n C08 H082 JKG sing 198 n n C11 H111 JKG sing 199 n n C14 H141 JKG sing 200 n n O15 H151 JKG sing 201 n n # _atom_sites.entry_id 7FQM _atom_sites.fract_transf_matrix[1][1] 0.011166 _atom_sites.fract_transf_matrix[1][2] 0.006447 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012893 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00941 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TRS A 1 701 701 TRS TRS . C 3 JKG A 1 702 801 JKG LIG . D 4 HOH A 1 801 466 HOH HOH . D 4 HOH A 2 802 631 HOH HOH . D 4 HOH A 3 803 401 HOH HOH . D 4 HOH A 4 804 637 HOH HOH . D 4 HOH A 5 805 639 HOH HOH . D 4 HOH A 6 806 425 HOH HOH . D 4 HOH A 7 807 646 HOH HOH . D 4 HOH A 8 808 656 HOH HOH . D 4 HOH A 9 809 633 HOH HOH . D 4 HOH A 10 810 439 HOH HOH . D 4 HOH A 11 811 643 HOH HOH . D 4 HOH A 12 812 617 HOH HOH . D 4 HOH A 13 813 630 HOH HOH . D 4 HOH A 14 814 404 HOH HOH . D 4 HOH A 15 815 431 HOH HOH . D 4 HOH A 16 816 406 HOH HOH . D 4 HOH A 17 817 471 HOH HOH . D 4 HOH A 18 818 434 HOH HOH . D 4 HOH A 19 819 412 HOH HOH . D 4 HOH A 20 820 413 HOH HOH . D 4 HOH A 21 821 636 HOH HOH . D 4 HOH A 22 822 448 HOH HOH . D 4 HOH A 23 823 454 HOH HOH . D 4 HOH A 24 824 621 HOH HOH . D 4 HOH A 25 825 475 HOH HOH . D 4 HOH A 26 826 642 HOH HOH . D 4 HOH A 27 827 451 HOH HOH . D 4 HOH A 28 828 415 HOH HOH . D 4 HOH A 29 829 469 HOH HOH . D 4 HOH A 30 830 547 HOH HOH . D 4 HOH A 31 831 585 HOH HOH . D 4 HOH A 32 832 474 HOH HOH . D 4 HOH A 33 833 484 HOH HOH . D 4 HOH A 34 834 440 HOH HOH . D 4 HOH A 35 835 444 HOH HOH . D 4 HOH A 36 836 421 HOH HOH . D 4 HOH A 37 837 437 HOH HOH . D 4 HOH A 38 838 427 HOH HOH . D 4 HOH A 39 839 588 HOH HOH . D 4 HOH A 40 840 516 HOH HOH . D 4 HOH A 41 841 496 HOH HOH . D 4 HOH A 42 842 498 HOH HOH . D 4 HOH A 43 843 481 HOH HOH . D 4 HOH A 44 844 423 HOH HOH . D 4 HOH A 45 845 483 HOH HOH . D 4 HOH A 46 846 574 HOH HOH . D 4 HOH A 47 847 477 HOH HOH . D 4 HOH A 48 848 472 HOH HOH . D 4 HOH A 49 849 500 HOH HOH . D 4 HOH A 50 850 447 HOH HOH . D 4 HOH A 51 851 403 HOH HOH . D 4 HOH A 52 852 603 HOH HOH . D 4 HOH A 53 853 499 HOH HOH . D 4 HOH A 54 854 651 HOH HOH . D 4 HOH A 55 855 626 HOH HOH . D 4 HOH A 56 856 430 HOH HOH . D 4 HOH A 57 857 449 HOH HOH . D 4 HOH A 58 858 505 HOH HOH . D 4 HOH A 59 859 522 HOH HOH . D 4 HOH A 60 860 443 HOH HOH . D 4 HOH A 61 861 482 HOH HOH . D 4 HOH A 62 862 433 HOH HOH . D 4 HOH A 63 863 442 HOH HOH . D 4 HOH A 64 864 623 HOH HOH . D 4 HOH A 65 865 436 HOH HOH . D 4 HOH A 66 866 502 HOH HOH . D 4 HOH A 67 867 577 HOH HOH . D 4 HOH A 68 868 501 HOH HOH . D 4 HOH A 69 869 512 HOH HOH . D 4 HOH A 70 870 533 HOH HOH . D 4 HOH A 71 871 545 HOH HOH . D 4 HOH A 72 872 432 HOH HOH . D 4 HOH A 73 873 419 HOH HOH . D 4 HOH A 74 874 426 HOH HOH . D 4 HOH A 75 875 455 HOH HOH . D 4 HOH A 76 876 488 HOH HOH . D 4 HOH A 77 877 491 HOH HOH . D 4 HOH A 78 878 531 HOH HOH . D 4 HOH A 79 879 530 HOH HOH . D 4 HOH A 80 880 506 HOH HOH . D 4 HOH A 81 881 508 HOH HOH . D 4 HOH A 82 882 625 HOH HOH . D 4 HOH A 83 883 521 HOH HOH . D 4 HOH A 84 884 459 HOH HOH . D 4 HOH A 85 885 450 HOH HOH . D 4 HOH A 86 886 492 HOH HOH . D 4 HOH A 87 887 514 HOH HOH . D 4 HOH A 88 888 497 HOH HOH . D 4 HOH A 89 889 543 HOH HOH . D 4 HOH A 90 890 478 HOH HOH . D 4 HOH A 91 891 638 HOH HOH . D 4 HOH A 92 892 507 HOH HOH . D 4 HOH A 93 893 495 HOH HOH . D 4 HOH A 94 894 487 HOH HOH . D 4 HOH A 95 895 538 HOH HOH . D 4 HOH A 96 896 548 HOH HOH . D 4 HOH A 97 897 647 HOH HOH . D 4 HOH A 98 898 655 HOH HOH . D 4 HOH A 99 899 473 HOH HOH . D 4 HOH A 100 900 489 HOH HOH . D 4 HOH A 101 901 566 HOH HOH . D 4 HOH A 102 902 438 HOH HOH . D 4 HOH A 103 903 409 HOH HOH . D 4 HOH A 104 904 540 HOH HOH . D 4 HOH A 105 905 568 HOH HOH . D 4 HOH A 106 906 551 HOH HOH . D 4 HOH A 107 907 534 HOH HOH . D 4 HOH A 108 908 527 HOH HOH . D 4 HOH A 109 909 542 HOH HOH . D 4 HOH A 110 910 649 HOH HOH . D 4 HOH A 111 911 549 HOH HOH . D 4 HOH A 112 912 553 HOH HOH . D 4 HOH A 113 913 511 HOH HOH . D 4 HOH A 114 914 558 HOH HOH . D 4 HOH A 115 915 424 HOH HOH . D 4 HOH A 116 916 529 HOH HOH . D 4 HOH A 117 917 570 HOH HOH . D 4 HOH A 118 918 493 HOH HOH . D 4 HOH A 119 919 635 HOH HOH . D 4 HOH A 120 920 571 HOH HOH . D 4 HOH A 121 921 518 HOH HOH . D 4 HOH A 122 922 627 HOH HOH . D 4 HOH A 123 923 579 HOH HOH . D 4 HOH A 124 924 575 HOH HOH . D 4 HOH A 125 925 494 HOH HOH . D 4 HOH A 126 926 453 HOH HOH . D 4 HOH A 127 927 555 HOH HOH . D 4 HOH A 128 928 573 HOH HOH . D 4 HOH A 129 929 569 HOH HOH . D 4 HOH A 130 930 581 HOH HOH . D 4 HOH A 131 931 520 HOH HOH . D 4 HOH A 132 932 644 HOH HOH . D 4 HOH A 133 933 410 HOH HOH . D 4 HOH A 134 934 539 HOH HOH . D 4 HOH A 135 935 632 HOH HOH . D 4 HOH A 136 936 645 HOH HOH . D 4 HOH A 137 937 546 HOH HOH . D 4 HOH A 138 938 528 HOH HOH . D 4 HOH A 139 939 557 HOH HOH . D 4 HOH A 140 940 648 HOH HOH . D 4 HOH A 141 941 650 HOH HOH . D 4 HOH A 142 942 479 HOH HOH . D 4 HOH A 143 943 510 HOH HOH . D 4 HOH A 144 944 480 HOH HOH . D 4 HOH A 145 945 560 HOH HOH . D 4 HOH A 146 946 552 HOH HOH . D 4 HOH A 147 947 580 HOH HOH . D 4 HOH A 148 948 591 HOH HOH . D 4 HOH A 149 949 544 HOH HOH . D 4 HOH A 150 950 463 HOH HOH . D 4 HOH A 151 951 578 HOH HOH . D 4 HOH A 152 952 624 HOH HOH . D 4 HOH A 153 953 653 HOH HOH . D 4 HOH A 154 954 584 HOH HOH . D 4 HOH A 155 955 562 HOH HOH . D 4 HOH A 156 956 652 HOH HOH . D 4 HOH A 157 957 641 HOH HOH . D 4 HOH A 158 958 622 HOH HOH . D 4 HOH A 159 959 654 HOH HOH . D 4 HOH A 160 960 597 HOH HOH . D 4 HOH A 161 961 598 HOH HOH . D 4 HOH A 162 962 634 HOH HOH . D 4 HOH A 163 963 599 HOH HOH . D 4 HOH A 164 964 657 HOH HOH . D 4 HOH A 165 965 600 HOH HOH . D 4 HOH A 166 966 470 HOH HOH . D 4 HOH A 167 967 605 HOH HOH . D 4 HOH A 168 968 612 HOH HOH . D 4 HOH A 169 969 523 HOH HOH . D 4 HOH A 170 970 486 HOH HOH . D 4 HOH A 171 971 611 HOH HOH . D 4 HOH A 172 972 417 HOH HOH . D 4 HOH A 173 973 604 HOH HOH . D 4 HOH A 174 974 629 HOH HOH . D 4 HOH A 175 975 411 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 JKG . . . C 3 56.099 8.874 20.175 0.48 51.73 ? C10 JKG 702 A 1 HETATM 2 C C13 JKG . . . C 3 57.442 10.246 18.199 0.48 51.83 ? C13 JKG 702 A 1 HETATM 3 C C01 JKG . . . C 3 51.817 3.771 17.669 0.48 58.01 ? C01 JKG 702 A 1 HETATM 4 C C02 JKG . . . C 3 51.998 5.169 17.562 0.48 51.48 ? C02 JKG 702 A 1 HETATM 5 C C03 JKG . . . C 3 52.072 5.804 18.758 0.48 53.34 ? C03 JKG 702 A 1 HETATM 6 S S04 JKG . . . C 3 51.926 4.684 20.044 0.48 63.47 ? S04 JKG 702 A 1 HETATM 7 C C05 JKG . . . C 3 51.763 3.37 18.955 0.48 60.62 ? C05 JKG 702 A 1 HETATM 8 C C06 JKG . . . C 3 52.252 7.241 18.889 0.48 50.12 ? C06 JKG 702 A 1 HETATM 9 N N07 JKG . . . C 3 53.72 7.583 18.744 0.48 46.04 ? N07 JKG 702 A 1 HETATM 10 C C08 JKG . . . C 3 53.954 9.025 18.955 0.48 45.8 ? C08 JKG 702 A 1 HETATM 11 C C09 JKG . . . C 3 55.383 9.302 19.066 0.48 49.96 ? C09 JKG 702 A 1 HETATM 12 C C11 JKG . . . C 3 57.436 9.121 20.309 0.48 52.07 ? C11 JKG 702 A 1 HETATM 13 C C12 JKG . . . C 3 58.132 9.806 19.341 0.48 49.93 ? C12 JKG 702 A 1 HETATM 14 C C14 JKG . . . C 3 56.091 9.983 18.078 0.48 51.63 ? C14 JKG 702 A 1 HETATM 15 O O15 JKG . . . C 3 59.43 10.011 19.498 0.48 55.36 ? O15 JKG 702 A 1 HETATM 16 H H101 JKG . . . C 3 55.591 8.338 20.97 0.48 51.36 ? H101 JKG 702 A 1 HETATM 17 H H131 JKG . . . C 3 58.01 10.778 17.438 0.48 51.31 ? H131 JKG 702 A 1 HETATM 18 H H011 JKG . . . C 3 51.738 3.115 16.795 0.48 56.92 ? H011 JKG 702 A 1 HETATM 19 H H021 JKG . . . C 3 52.058 5.637 16.58 0.48 53.54 ? H021 JKG 702 A 1 HETATM 20 H H051 JKG . . . C 3 51.632 2.342 19.298 0.48 60.22 ? H051 JKG 702 A 1 HETATM 21 H H062 JKG . . . C 3 51.664 7.818 18.125 0.48 49.84 ? H062 JKG 702 A 1 HETATM 22 H H061 JKG . . . C 3 51.898 7.618 19.878 0.48 49.83 ? H061 JKG 702 A 1 HETATM 23 H H071 JKG . . . C 3 54.03 7.309 17.791 0.48 46.91 ? H071 JKG 702 A 1 HETATM 24 H H081 JKG . . . C 3 53.373 9.361 19.844 0.48 46.82 ? H081 JKG 702 A 1 HETATM 25 H H082 JKG . . . C 3 53.457 9.547 18.103 0.48 46.81 ? H082 JKG 702 A 1 HETATM 26 H H111 JKG . . . C 3 57.997 8.787 21.188 0.48 51.44 ? H111 JKG 702 A 1 HETATM 27 H H141 JKG . . . C 3 55.58 10.345 17.182 0.48 51.27 ? H141 JKG 702 A 1 HETATM 28 H H151 JKG . . . C 3 59.899 9.797 18.68 0.48 53.62 ? H151 JKG 702 A 1 # _model_server_stats.io_time_ms 41 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 28 #