data_7FRH # _model_server_result.job_id ZsAtbn4hy0nhsCmF2d_nxg _model_server_result.datetime_utc '2024-11-21 23:25:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7frh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":702}' # _entry.id 7FRH # _exptl.entry_id 7FRH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.168 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N,N-dimethylpyridin-4-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7FRH _cell.length_a 89.618 _cell.length_b 89.618 _cell.length_c 106.406 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7FRH _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C7 H10 N2' _chem_comp.formula_weight 122.168 _chem_comp.id JGD _chem_comp.mon_nstd_flag . _chem_comp.name N,N-dimethylpyridin-4-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C03 N02 JGD sing 173 n n C09 C08 JGD doub 174 n y C09 C04 JGD sing 175 n y C08 N07 JGD sing 176 n y N02 C04 JGD sing 177 n n N02 C01 JGD sing 178 n n C04 C05 JGD doub 179 n y N07 C06 JGD doub 180 n y C05 C06 JGD sing 181 n y C01 H011 JGD sing 182 n n C01 H012 JGD sing 183 n n C01 H013 JGD sing 184 n n C03 H032 JGD sing 185 n n C03 H033 JGD sing 186 n n C03 H031 JGD sing 187 n n C05 H051 JGD sing 188 n n C06 H061 JGD sing 189 n n C08 H081 JGD sing 190 n n C09 H091 JGD sing 191 n n # _atom_sites.entry_id 7FRH _atom_sites.fract_transf_matrix[1][1] 0.011158 _atom_sites.fract_transf_matrix[1][2] 0.006442 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012885 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009398 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TRS A 1 701 701 TRS TRS . C 3 JGD A 1 702 801 JGD LIG . D 4 HOH A 1 801 631 HOH HOH . D 4 HOH A 2 802 401 HOH HOH . D 4 HOH A 3 803 646 HOH HOH . D 4 HOH A 4 804 633 HOH HOH . D 4 HOH A 5 805 466 HOH HOH . D 4 HOH A 6 806 639 HOH HOH . D 4 HOH A 7 807 637 HOH HOH . D 4 HOH A 8 808 404 HOH HOH . D 4 HOH A 9 809 425 HOH HOH . D 4 HOH A 10 810 406 HOH HOH . D 4 HOH A 11 811 447 HOH HOH . D 4 HOH A 12 812 636 HOH HOH . D 4 HOH A 13 813 438 HOH HOH . D 4 HOH A 14 814 621 HOH HOH . D 4 HOH A 15 815 448 HOH HOH . D 4 HOH A 16 816 569 HOH HOH . D 4 HOH A 17 817 413 HOH HOH . D 4 HOH A 18 818 522 HOH HOH . D 4 HOH A 19 819 474 HOH HOH . D 4 HOH A 20 820 493 HOH HOH . D 4 HOH A 21 821 481 HOH HOH . D 4 HOH A 22 822 471 HOH HOH . D 4 HOH A 23 823 630 HOH HOH . D 4 HOH A 24 824 431 HOH HOH . D 4 HOH A 25 825 439 HOH HOH . D 4 HOH A 26 826 483 HOH HOH . D 4 HOH A 27 827 427 HOH HOH . D 4 HOH A 28 828 484 HOH HOH . D 4 HOH A 29 829 412 HOH HOH . D 4 HOH A 30 830 643 HOH HOH . D 4 HOH A 31 831 656 HOH HOH . D 4 HOH A 32 832 514 HOH HOH . D 4 HOH A 33 833 477 HOH HOH . D 4 HOH A 34 834 436 HOH HOH . D 4 HOH A 35 835 423 HOH HOH . D 4 HOH A 36 836 443 HOH HOH . D 4 HOH A 37 837 419 HOH HOH . D 4 HOH A 38 838 617 HOH HOH . D 4 HOH A 39 839 548 HOH HOH . D 4 HOH A 40 840 451 HOH HOH . D 4 HOH A 41 841 454 HOH HOH . D 4 HOH A 42 842 459 HOH HOH . D 4 HOH A 43 843 415 HOH HOH . D 4 HOH A 44 844 651 HOH HOH . D 4 HOH A 45 845 623 HOH HOH . D 4 HOH A 46 846 472 HOH HOH . D 4 HOH A 47 847 482 HOH HOH . D 4 HOH A 48 848 496 HOH HOH . D 4 HOH A 49 849 403 HOH HOH . D 4 HOH A 50 850 638 HOH HOH . D 4 HOH A 51 851 442 HOH HOH . D 4 HOH A 52 852 603 HOH HOH . D 4 HOH A 53 853 585 HOH HOH . D 4 HOH A 54 854 625 HOH HOH . D 4 HOH A 55 855 421 HOH HOH . D 4 HOH A 56 856 437 HOH HOH . D 4 HOH A 57 857 444 HOH HOH . D 4 HOH A 58 858 498 HOH HOH . D 4 HOH A 59 859 475 HOH HOH . D 4 HOH A 60 860 430 HOH HOH . D 4 HOH A 61 861 440 HOH HOH . D 4 HOH A 62 862 642 HOH HOH . D 4 HOH A 63 863 469 HOH HOH . D 4 HOH A 64 864 632 HOH HOH . D 4 HOH A 65 865 497 HOH HOH . D 4 HOH A 66 866 501 HOH HOH . D 4 HOH A 67 867 449 HOH HOH . D 4 HOH A 68 868 512 HOH HOH . D 4 HOH A 69 869 434 HOH HOH . D 4 HOH A 70 870 577 HOH HOH . D 4 HOH A 71 871 480 HOH HOH . D 4 HOH A 72 872 533 HOH HOH . D 4 HOH A 73 873 426 HOH HOH . D 4 HOH A 74 874 424 HOH HOH . D 4 HOH A 75 875 644 HOH HOH . D 4 HOH A 76 876 547 HOH HOH . D 4 HOH A 77 877 455 HOH HOH . D 4 HOH A 78 878 626 HOH HOH . D 4 HOH A 79 879 432 HOH HOH . D 4 HOH A 80 880 491 HOH HOH . D 4 HOH A 81 881 506 HOH HOH . D 4 HOH A 82 882 499 HOH HOH . D 4 HOH A 83 883 551 HOH HOH . D 4 HOH A 84 884 502 HOH HOH . D 4 HOH A 85 885 495 HOH HOH . D 4 HOH A 86 886 540 HOH HOH . D 4 HOH A 87 887 505 HOH HOH . D 4 HOH A 88 888 488 HOH HOH . D 4 HOH A 89 889 492 HOH HOH . D 4 HOH A 90 890 500 HOH HOH . D 4 HOH A 91 891 508 HOH HOH . D 4 HOH A 92 892 655 HOH HOH . D 4 HOH A 93 893 560 HOH HOH . D 4 HOH A 94 894 494 HOH HOH . D 4 HOH A 95 895 516 HOH HOH . D 4 HOH A 96 896 530 HOH HOH . D 4 HOH A 97 897 539 HOH HOH . D 4 HOH A 98 898 545 HOH HOH . D 4 HOH A 99 899 645 HOH HOH . D 4 HOH A 100 900 433 HOH HOH . D 4 HOH A 101 901 507 HOH HOH . D 4 HOH A 102 902 453 HOH HOH . D 4 HOH A 103 903 574 HOH HOH . D 4 HOH A 104 904 463 HOH HOH . D 4 HOH A 105 905 543 HOH HOH . D 4 HOH A 106 906 570 HOH HOH . D 4 HOH A 107 907 654 HOH HOH . D 4 HOH A 108 908 568 HOH HOH . D 4 HOH A 109 909 521 HOH HOH . D 4 HOH A 110 910 647 HOH HOH . D 4 HOH A 111 911 489 HOH HOH . D 4 HOH A 112 912 558 HOH HOH . D 4 HOH A 113 913 542 HOH HOH . D 4 HOH A 114 914 487 HOH HOH . D 4 HOH A 115 915 584 HOH HOH . D 4 HOH A 116 916 553 HOH HOH . D 4 HOH A 117 917 478 HOH HOH . D 4 HOH A 118 918 531 HOH HOH . D 4 HOH A 119 919 479 HOH HOH . D 4 HOH A 120 920 534 HOH HOH . D 4 HOH A 121 921 518 HOH HOH . D 4 HOH A 122 922 527 HOH HOH . D 4 HOH A 123 923 573 HOH HOH . D 4 HOH A 124 924 552 HOH HOH . D 4 HOH A 125 925 410 HOH HOH . D 4 HOH A 126 926 571 HOH HOH . D 4 HOH A 127 927 409 HOH HOH . D 4 HOH A 128 928 450 HOH HOH . D 4 HOH A 129 929 511 HOH HOH . D 4 HOH A 130 930 627 HOH HOH . D 4 HOH A 131 931 510 HOH HOH . D 4 HOH A 132 932 635 HOH HOH . D 4 HOH A 133 933 575 HOH HOH . D 4 HOH A 134 934 566 HOH HOH . D 4 HOH A 135 935 529 HOH HOH . D 4 HOH A 136 936 473 HOH HOH . D 4 HOH A 137 937 528 HOH HOH . D 4 HOH A 138 938 581 HOH HOH . D 4 HOH A 139 939 546 HOH HOH . D 4 HOH A 140 940 557 HOH HOH . D 4 HOH A 141 941 588 HOH HOH . D 4 HOH A 142 942 580 HOH HOH . D 4 HOH A 143 943 520 HOH HOH . D 4 HOH A 144 944 653 HOH HOH . D 4 HOH A 145 945 549 HOH HOH . D 4 HOH A 146 946 579 HOH HOH . D 4 HOH A 147 947 650 HOH HOH . D 4 HOH A 148 948 634 HOH HOH . D 4 HOH A 149 949 544 HOH HOH . D 4 HOH A 150 950 648 HOH HOH . D 4 HOH A 151 951 562 HOH HOH . D 4 HOH A 152 952 555 HOH HOH . D 4 HOH A 153 953 649 HOH HOH . D 4 HOH A 154 954 652 HOH HOH . D 4 HOH A 155 955 591 HOH HOH . D 4 HOH A 156 956 578 HOH HOH . D 4 HOH A 157 957 538 HOH HOH . D 4 HOH A 158 958 600 HOH HOH . D 4 HOH A 159 959 597 HOH HOH . D 4 HOH A 160 960 598 HOH HOH . D 4 HOH A 161 961 599 HOH HOH . D 4 HOH A 162 962 612 HOH HOH . D 4 HOH A 163 963 470 HOH HOH . D 4 HOH A 164 964 417 HOH HOH . D 4 HOH A 165 965 486 HOH HOH . D 4 HOH A 166 966 641 HOH HOH . D 4 HOH A 167 967 605 HOH HOH . D 4 HOH A 168 968 622 HOH HOH . D 4 HOH A 169 969 624 HOH HOH . D 4 HOH A 170 970 523 HOH HOH . D 4 HOH A 171 971 611 HOH HOH . D 4 HOH A 172 972 629 HOH HOH . D 4 HOH A 173 973 604 HOH HOH . D 4 HOH A 174 974 411 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 JGD . . . C 3 54.468 12.42 18.649 0.5 32.29 ? C01 JGD 702 A 1 HETATM 2 N N02 JGD . . . C 3 55.762 11.762 18.568 0.5 32.83 ? N02 JGD 702 A 1 HETATM 3 C C03 JGD . . . C 3 55.775 10.317 18.343 0.5 34.62 ? C03 JGD 702 A 1 HETATM 4 C C04 JGD . . . C 3 56.978 12.567 18.654 0.5 30.79 ? C04 JGD 702 A 1 HETATM 5 C C05 JGD . . . C 3 58.237 12.096 18.241 0.5 31.78 ? C05 JGD 702 A 1 HETATM 6 C C06 JGD . . . C 3 59.35 12.921 18.336 0.5 30.93 ? C06 JGD 702 A 1 HETATM 7 N N07 JGD . . . C 3 59.212 14.138 18.811 0.5 30.91 ? N07 JGD 702 A 1 HETATM 8 C C08 JGD . . . C 3 58.031 14.62 19.18 0.5 28.96 ? C08 JGD 702 A 1 HETATM 9 C C09 JGD . . . C 3 56.886 13.867 19.126 0.5 29.93 ? C09 JGD 702 A 1 HETATM 10 H H011 JGD . . . C 3 53.694 11.767 18.253 0.5 32.45 ? H011 JGD 702 A 1 HETATM 11 H H012 JGD . . . C 3 54.485 13.317 18.033 0.5 32.43 ? H012 JGD 702 A 1 HETATM 12 H H013 JGD . . . C 3 54.244 12.68 19.683 0.5 32.43 ? H013 JGD 702 A 1 HETATM 13 H H032 JGD . . . C 3 56.763 9.973 18.041 0.5 34.03 ? H032 JGD 702 A 1 HETATM 14 H H033 JGD . . . C 3 55.059 10.065 17.557 0.5 34.04 ? H033 JGD 702 A 1 HETATM 15 H H031 JGD . . . C 3 55.497 9.805 19.266 0.5 34.04 ? H031 JGD 702 A 1 HETATM 16 H H051 JGD . . . C 3 58.362 11.096 17.859 0.5 31.29 ? H051 JGD 702 A 1 HETATM 17 H H061 JGD . . . C 3 60.321 12.561 18.031 0.5 31.07 ? H061 JGD 702 A 1 HETATM 18 H H081 JGD . . . C 3 57.954 15.625 19.565 0.5 29.74 ? H081 JGD 702 A 1 HETATM 19 H H091 JGD . . . C 3 55.956 14.286 19.453 0.5 30 ? H091 JGD 702 A 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 19 #