data_7FRI # _model_server_result.job_id sSi1y6k2JYbHx7qYsm6XkA _model_server_result.datetime_utc '2024-11-14 23:04:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7fri # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":702}' # _entry.id 7FRI # _exptl.entry_id 7FRI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 243.261 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "N-(4-methoxyphenyl)-N'-pyridin-4-ylurea" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7FRI _cell.length_a 89.593 _cell.length_b 89.593 _cell.length_c 106.363 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7FRI _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C13 H13 N3 O2' _chem_comp.formula_weight 243.261 _chem_comp.id JHJ _chem_comp.mon_nstd_flag . _chem_comp.name "N-(4-methoxyphenyl)-N'-pyridin-4-ylurea" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 JHJ doub 173 n y C18 C13 JHJ sing 174 n y C17 N16 JHJ sing 175 n y N16 C15 JHJ doub 176 n y N12 C13 JHJ sing 177 n n N12 C10 JHJ sing 178 n n C13 C14 JHJ doub 179 n y N09 C10 JHJ sing 180 n n N09 C06 JHJ sing 181 n n C05 C06 JHJ doub 182 n y C05 C04 JHJ sing 183 n y C10 O11 JHJ doub 184 n n C15 C14 JHJ sing 185 n y C06 C07 JHJ sing 186 n y C04 C03 JHJ doub 187 n y C07 C08 JHJ doub 188 n y C03 C08 JHJ sing 189 n y C03 O02 JHJ sing 190 n n C01 O02 JHJ sing 191 n n N12 H121 JHJ sing 192 n n C15 H151 JHJ sing 193 n n C17 H171 JHJ sing 194 n n C01 H013 JHJ sing 195 n n C01 H012 JHJ sing 196 n n C01 H011 JHJ sing 197 n n C04 H041 JHJ sing 198 n n C05 H051 JHJ sing 199 n n C07 H071 JHJ sing 200 n n C08 H081 JHJ sing 201 n n C14 H141 JHJ sing 202 n n C18 H181 JHJ sing 203 n n N09 H091 JHJ sing 204 n n # _atom_sites.entry_id 7FRI _atom_sites.fract_transf_matrix[1][1] 0.011162 _atom_sites.fract_transf_matrix[1][2] 0.006444 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012888 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009402 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TRS A 1 701 701 TRS TRS . C 3 JHJ A 1 702 801 JHJ LIG . D 4 HOH A 1 801 401 HOH HOH . D 4 HOH A 2 802 646 HOH HOH . D 4 HOH A 3 803 466 HOH HOH . D 4 HOH A 4 804 639 HOH HOH . D 4 HOH A 5 805 425 HOH HOH . D 4 HOH A 6 806 637 HOH HOH . D 4 HOH A 7 807 404 HOH HOH . D 4 HOH A 8 808 633 HOH HOH . D 4 HOH A 9 809 643 HOH HOH . D 4 HOH A 10 810 406 HOH HOH . D 4 HOH A 11 811 569 HOH HOH . D 4 HOH A 12 812 413 HOH HOH . D 4 HOH A 13 813 555 HOH HOH . D 4 HOH A 14 814 630 HOH HOH . D 4 HOH A 15 815 431 HOH HOH . D 4 HOH A 16 816 625 HOH HOH . D 4 HOH A 17 817 471 HOH HOH . D 4 HOH A 18 818 621 HOH HOH . D 4 HOH A 19 819 636 HOH HOH . D 4 HOH A 20 820 421 HOH HOH . D 4 HOH A 21 821 412 HOH HOH . D 4 HOH A 22 822 585 HOH HOH . D 4 HOH A 23 823 496 HOH HOH . D 4 HOH A 24 824 451 HOH HOH . D 4 HOH A 25 825 631 HOH HOH . D 4 HOH A 26 826 438 HOH HOH . D 4 HOH A 27 827 603 HOH HOH . D 4 HOH A 28 828 434 HOH HOH . D 4 HOH A 29 829 474 HOH HOH . D 4 HOH A 30 830 448 HOH HOH . D 4 HOH A 31 831 484 HOH HOH . D 4 HOH A 32 832 423 HOH HOH . D 4 HOH A 33 833 449 HOH HOH . D 4 HOH A 34 834 427 HOH HOH . D 4 HOH A 35 835 439 HOH HOH . D 4 HOH A 36 836 454 HOH HOH . D 4 HOH A 37 837 443 HOH HOH . D 4 HOH A 38 838 483 HOH HOH . D 4 HOH A 39 839 430 HOH HOH . D 4 HOH A 40 840 617 HOH HOH . D 4 HOH A 41 841 480 HOH HOH . D 4 HOH A 42 842 447 HOH HOH . D 4 HOH A 43 843 403 HOH HOH . D 4 HOH A 44 844 433 HOH HOH . D 4 HOH A 45 845 415 HOH HOH . D 4 HOH A 46 846 419 HOH HOH . D 4 HOH A 47 847 481 HOH HOH . D 4 HOH A 48 848 450 HOH HOH . D 4 HOH A 49 849 482 HOH HOH . D 4 HOH A 50 850 642 HOH HOH . D 4 HOH A 51 851 472 HOH HOH . D 4 HOH A 52 852 442 HOH HOH . D 4 HOH A 53 853 444 HOH HOH . D 4 HOH A 54 854 437 HOH HOH . D 4 HOH A 55 855 522 HOH HOH . D 4 HOH A 56 856 545 HOH HOH . D 4 HOH A 57 857 656 HOH HOH . D 4 HOH A 58 858 459 HOH HOH . D 4 HOH A 59 859 568 HOH HOH . D 4 HOH A 60 860 473 HOH HOH . D 4 HOH A 61 861 426 HOH HOH . D 4 HOH A 62 862 514 HOH HOH . D 4 HOH A 63 863 505 HOH HOH . D 4 HOH A 64 864 475 HOH HOH . D 4 HOH A 65 865 440 HOH HOH . D 4 HOH A 66 866 498 HOH HOH . D 4 HOH A 67 867 651 HOH HOH . D 4 HOH A 68 868 499 HOH HOH . D 4 HOH A 69 869 512 HOH HOH . D 4 HOH A 70 870 436 HOH HOH . D 4 HOH A 71 871 547 HOH HOH . D 4 HOH A 72 872 623 HOH HOH . D 4 HOH A 73 873 488 HOH HOH . D 4 HOH A 74 874 493 HOH HOH . D 4 HOH A 75 875 521 HOH HOH . D 4 HOH A 76 876 502 HOH HOH . D 4 HOH A 77 877 527 HOH HOH . D 4 HOH A 78 878 455 HOH HOH . D 4 HOH A 79 879 432 HOH HOH . D 4 HOH A 80 880 577 HOH HOH . D 4 HOH A 81 881 627 HOH HOH . D 4 HOH A 82 882 501 HOH HOH . D 4 HOH A 83 883 424 HOH HOH . D 4 HOH A 84 884 647 HOH HOH . D 4 HOH A 85 885 574 HOH HOH . D 4 HOH A 86 886 516 HOH HOH . D 4 HOH A 87 887 469 HOH HOH . D 4 HOH A 88 888 548 HOH HOH . D 4 HOH A 89 889 463 HOH HOH . D 4 HOH A 90 890 533 HOH HOH . D 4 HOH A 91 891 491 HOH HOH . D 4 HOH A 92 892 518 HOH HOH . D 4 HOH A 93 893 497 HOH HOH . D 4 HOH A 94 894 635 HOH HOH . D 4 HOH A 95 895 506 HOH HOH . D 4 HOH A 96 896 638 HOH HOH . D 4 HOH A 97 897 530 HOH HOH . D 4 HOH A 98 898 570 HOH HOH . D 4 HOH A 99 899 489 HOH HOH . D 4 HOH A 100 900 478 HOH HOH . D 4 HOH A 101 901 508 HOH HOH . D 4 HOH A 102 902 551 HOH HOH . D 4 HOH A 103 903 500 HOH HOH . D 4 HOH A 104 904 507 HOH HOH . D 4 HOH A 105 905 563 HOH HOH . D 4 HOH A 106 906 409 HOH HOH . D 4 HOH A 107 907 479 HOH HOH . D 4 HOH A 108 908 655 HOH HOH . D 4 HOH A 109 909 542 HOH HOH . D 4 HOH A 110 910 645 HOH HOH . D 4 HOH A 111 911 539 HOH HOH . D 4 HOH A 112 912 487 HOH HOH . D 4 HOH A 113 913 579 HOH HOH . D 4 HOH A 114 914 540 HOH HOH . D 4 HOH A 115 915 566 HOH HOH . D 4 HOH A 116 916 510 HOH HOH . D 4 HOH A 117 917 410 HOH HOH . D 4 HOH A 118 918 492 HOH HOH . D 4 HOH A 119 919 531 HOH HOH . D 4 HOH A 120 920 453 HOH HOH . D 4 HOH A 121 921 553 HOH HOH . D 4 HOH A 122 922 644 HOH HOH . D 4 HOH A 123 923 495 HOH HOH . D 4 HOH A 124 924 558 HOH HOH . D 4 HOH A 125 925 581 HOH HOH . D 4 HOH A 126 926 534 HOH HOH . D 4 HOH A 127 927 600 HOH HOH . D 4 HOH A 128 928 573 HOH HOH . D 4 HOH A 129 929 549 HOH HOH . D 4 HOH A 130 930 538 HOH HOH . D 4 HOH A 131 931 560 HOH HOH . D 4 HOH A 132 932 649 HOH HOH . D 4 HOH A 133 933 546 HOH HOH . D 4 HOH A 134 934 552 HOH HOH . D 4 HOH A 135 935 588 HOH HOH . D 4 HOH A 136 936 571 HOH HOH . D 4 HOH A 137 937 628 HOH HOH . D 4 HOH A 138 938 528 HOH HOH . D 4 HOH A 139 939 584 HOH HOH . D 4 HOH A 140 940 529 HOH HOH . D 4 HOH A 141 941 520 HOH HOH . D 4 HOH A 142 942 622 HOH HOH . D 4 HOH A 143 943 544 HOH HOH . D 4 HOH A 144 944 575 HOH HOH . D 4 HOH A 145 945 511 HOH HOH . D 4 HOH A 146 946 494 HOH HOH . D 4 HOH A 147 947 557 HOH HOH . D 4 HOH A 148 948 543 HOH HOH . D 4 HOH A 149 949 591 HOH HOH . D 4 HOH A 150 950 648 HOH HOH . D 4 HOH A 151 951 650 HOH HOH . D 4 HOH A 152 952 654 HOH HOH . D 4 HOH A 153 953 562 HOH HOH . D 4 HOH A 154 954 580 HOH HOH . D 4 HOH A 155 955 578 HOH HOH . D 4 HOH A 156 956 597 HOH HOH . D 4 HOH A 157 957 653 HOH HOH . D 4 HOH A 158 958 634 HOH HOH . D 4 HOH A 159 959 598 HOH HOH . D 4 HOH A 160 960 652 HOH HOH . D 4 HOH A 161 961 417 HOH HOH . D 4 HOH A 162 962 624 HOH HOH . D 4 HOH A 163 963 477 HOH HOH . D 4 HOH A 164 964 632 HOH HOH . D 4 HOH A 165 965 599 HOH HOH . D 4 HOH A 166 966 523 HOH HOH . D 4 HOH A 167 967 470 HOH HOH . D 4 HOH A 168 968 612 HOH HOH . D 4 HOH A 169 969 641 HOH HOH . D 4 HOH A 170 970 605 HOH HOH . D 4 HOH A 171 971 486 HOH HOH . D 4 HOH A 172 972 611 HOH HOH . D 4 HOH A 173 973 604 HOH HOH . D 4 HOH A 174 974 629 HOH HOH . D 4 HOH A 175 975 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 JHJ . . . C 3 19.971 7.859 10.699 0.55 71.57 ? C10 JHJ 702 A 1 HETATM 2 N N12 JHJ . . . C 3 19.941 8.372 9.34 0.55 70.12 ? N12 JHJ 702 A 1 HETATM 3 C C13 JHJ . . . C 3 19.305 9.627 8.954 0.55 72.41 ? C13 JHJ 702 A 1 HETATM 4 C C15 JHJ . . . C 3 18.037 11.621 9.376 0.55 70.76 ? C15 JHJ 702 A 1 HETATM 5 C C17 JHJ . . . C 3 18.792 11.201 7.232 0.55 72.14 ? C17 JHJ 702 A 1 HETATM 6 C C01 JHJ . . . C 3 19.599 4.316 16.823 0.55 89.01 ? C01 JHJ 702 A 1 HETATM 7 C C03 JHJ . . . C 3 20.788 4.984 14.883 0.55 88.36 ? C03 JHJ 702 A 1 HETATM 8 C C04 JHJ . . . C 3 20.099 4.312 13.877 0.55 85.92 ? C04 JHJ 702 A 1 HETATM 9 C C05 JHJ . . . C 3 20.047 4.844 12.593 0.55 82.7 ? C05 JHJ 702 A 1 HETATM 10 C C06 JHJ . . . C 3 20.687 6.047 12.311 0.55 80.81 ? C06 JHJ 702 A 1 HETATM 11 C C07 JHJ . . . C 3 21.379 6.72 13.314 0.55 85.15 ? C07 JHJ 702 A 1 HETATM 12 C C08 JHJ . . . C 3 21.43 6.19 14.6 0.55 87.1 ? C08 JHJ 702 A 1 HETATM 13 C C14 JHJ . . . C 3 18.603 10.45 9.85 0.55 70.42 ? C14 JHJ 702 A 1 HETATM 14 C C18 JHJ . . . C 3 19.397 10.011 7.617 0.55 69.46 ? C18 JHJ 702 A 1 HETATM 15 N N09 JHJ . . . C 3 20.631 6.596 10.966 0.55 74.63 ? N09 JHJ 702 A 1 HETATM 16 N N16 JHJ . . . C 3 18.141 11.963 8.104 0.55 74.32 ? N16 JHJ 702 A 1 HETATM 17 O O02 JHJ . . . C 3 20.84 4.445 16.181 0.55 89.36 ? O02 JHJ 702 A 1 HETATM 18 O O11 JHJ . . . C 3 19.475 8.449 11.593 0.55 70.74 ? O11 JHJ 702 A 1 HETATM 19 H H121 JHJ . . . C 3 20.386 7.816 8.609 0.55 71.16 ? H121 JHJ 702 A 1 HETATM 20 H H151 JHJ . . . C 3 17.497 12.263 10.056 0.55 71.47 ? H151 JHJ 702 A 1 HETATM 21 H H171 JHJ . . . C 3 18.858 11.517 6.202 0.55 71.93 ? H171 JHJ 702 A 1 HETATM 22 H H013 JHJ . . . C 3 19.003 5.215 16.661 0.55 89.1 ? H013 JHJ 702 A 1 HETATM 23 H H012 JHJ . . . C 3 19.07 3.451 16.422 0.55 89.09 ? H012 JHJ 702 A 1 HETATM 24 H H011 JHJ . . . C 3 19.759 4.177 17.892 0.55 89.1 ? H011 JHJ 702 A 1 HETATM 25 H H041 JHJ . . . C 3 19.601 3.378 14.094 0.55 85.57 ? H041 JHJ 702 A 1 HETATM 26 H H051 JHJ . . . C 3 19.512 4.322 11.814 0.55 83.15 ? H051 JHJ 702 A 1 HETATM 27 H H071 JHJ . . . C 3 21.875 7.654 13.095 0.55 84.46 ? H071 JHJ 702 A 1 HETATM 28 H H081 JHJ . . . C 3 21.967 6.712 15.378 0.55 86.62 ? H081 JHJ 702 A 1 HETATM 29 H H141 JHJ . . . C 3 18.499 10.202 10.893 0.55 70.99 ? H141 JHJ 702 A 1 HETATM 30 H H181 JHJ . . . C 3 19.926 9.401 6.899 0.55 70.82 ? H181 JHJ 702 A 1 HETATM 31 H H091 JHJ . . . C 3 21.062 6.083 10.197 0.55 75.09 ? H091 JHJ 702 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 31 #