data_7FRM # _model_server_result.job_id y0YyixSkRKeqYZULf-FrkQ _model_server_result.datetime_utc '2024-11-13 10:57:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7frm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":701}' # _entry.id 7FRM # _exptl.entry_id 7FRM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7FRM _cell.length_a 89.606 _cell.length_b 89.606 _cell.length_c 106.335 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7FRM _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 368 n n C C2 TRS sing 369 n n C C3 TRS sing 370 n n C N TRS sing 371 n n C1 O1 TRS sing 372 n n C1 H11 TRS sing 373 n n C1 H12 TRS sing 374 n n C2 O2 TRS sing 375 n n C2 H21 TRS sing 376 n n C2 H22 TRS sing 377 n n C3 O3 TRS sing 378 n n C3 H31 TRS sing 379 n n C3 H32 TRS sing 380 n n N HN1 TRS sing 381 n n N HN2 TRS sing 382 n n N HN3 TRS sing 383 n n O1 HO1 TRS sing 384 n n O2 HO2 TRS sing 385 n n O3 HO3 TRS sing 386 n n # _atom_sites.entry_id 7FRM _atom_sites.fract_transf_matrix[1][1] 0.01116 _atom_sites.fract_transf_matrix[1][2] 0.006443 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012886 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009404 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TRS A 1 701 701 TRS TRS . C 3 JGG A 1 702 801 JGG LIG . D 4 HOH A 1 801 401 HOH HOH . D 4 HOH A 2 802 466 HOH HOH . D 4 HOH A 3 803 630 HOH HOH . D 4 HOH A 4 804 406 HOH HOH . D 4 HOH A 5 805 637 HOH HOH . D 4 HOH A 6 806 639 HOH HOH . D 4 HOH A 7 807 425 HOH HOH . D 4 HOH A 8 808 646 HOH HOH . D 4 HOH A 9 809 643 HOH HOH . D 4 HOH A 10 810 518 HOH HOH . D 4 HOH A 11 811 413 HOH HOH . D 4 HOH A 12 812 548 HOH HOH . D 4 HOH A 13 813 633 HOH HOH . D 4 HOH A 14 814 438 HOH HOH . D 4 HOH A 15 815 431 HOH HOH . D 4 HOH A 16 816 471 HOH HOH . D 4 HOH A 17 817 627 HOH HOH . D 4 HOH A 18 818 631 HOH HOH . D 4 HOH A 19 819 484 HOH HOH . D 4 HOH A 20 820 421 HOH HOH . D 4 HOH A 21 821 412 HOH HOH . D 4 HOH A 22 822 448 HOH HOH . D 4 HOH A 23 823 423 HOH HOH . D 4 HOH A 24 824 434 HOH HOH . D 4 HOH A 25 825 496 HOH HOH . D 4 HOH A 26 826 447 HOH HOH . D 4 HOH A 27 827 636 HOH HOH . D 4 HOH A 28 828 656 HOH HOH . D 4 HOH A 29 829 419 HOH HOH . D 4 HOH A 30 830 522 HOH HOH . D 4 HOH A 31 831 443 HOH HOH . D 4 HOH A 32 832 451 HOH HOH . D 4 HOH A 33 833 483 HOH HOH . D 4 HOH A 34 834 482 HOH HOH . D 4 HOH A 35 835 523 HOH HOH . D 4 HOH A 36 836 481 HOH HOH . D 4 HOH A 37 837 621 HOH HOH . D 4 HOH A 38 838 439 HOH HOH . D 4 HOH A 39 839 545 HOH HOH . D 4 HOH A 40 840 474 HOH HOH . D 4 HOH A 41 841 617 HOH HOH . D 4 HOH A 42 842 430 HOH HOH . D 4 HOH A 43 843 436 HOH HOH . D 4 HOH A 44 844 427 HOH HOH . D 4 HOH A 45 845 454 HOH HOH . D 4 HOH A 46 846 577 HOH HOH . D 4 HOH A 47 847 449 HOH HOH . D 4 HOH A 48 848 415 HOH HOH . D 4 HOH A 49 849 469 HOH HOH . D 4 HOH A 50 850 625 HOH HOH . D 4 HOH A 51 851 547 HOH HOH . D 4 HOH A 52 852 500 HOH HOH . D 4 HOH A 53 853 472 HOH HOH . D 4 HOH A 54 854 516 HOH HOH . D 4 HOH A 55 855 477 HOH HOH . D 4 HOH A 56 856 403 HOH HOH . D 4 HOH A 57 857 459 HOH HOH . D 4 HOH A 58 858 426 HOH HOH . D 4 HOH A 59 859 437 HOH HOH . D 4 HOH A 60 860 432 HOH HOH . D 4 HOH A 61 861 585 HOH HOH . D 4 HOH A 62 862 442 HOH HOH . D 4 HOH A 63 863 497 HOH HOH . D 4 HOH A 64 864 475 HOH HOH . D 4 HOH A 65 865 655 HOH HOH . D 4 HOH A 66 866 499 HOH HOH . D 4 HOH A 67 867 473 HOH HOH . D 4 HOH A 68 868 603 HOH HOH . D 4 HOH A 69 869 498 HOH HOH . D 4 HOH A 70 870 505 HOH HOH . D 4 HOH A 71 871 638 HOH HOH . D 4 HOH A 72 872 651 HOH HOH . D 4 HOH A 73 873 626 HOH HOH . D 4 HOH A 74 874 642 HOH HOH . D 4 HOH A 75 875 623 HOH HOH . D 4 HOH A 76 876 455 HOH HOH . D 4 HOH A 77 877 404 HOH HOH . D 4 HOH A 78 878 488 HOH HOH . D 4 HOH A 79 879 489 HOH HOH . D 4 HOH A 80 880 563 HOH HOH . D 4 HOH A 81 881 440 HOH HOH . D 4 HOH A 82 882 501 HOH HOH . D 4 HOH A 83 883 568 HOH HOH . D 4 HOH A 84 884 647 HOH HOH . D 4 HOH A 85 885 433 HOH HOH . D 4 HOH A 86 886 491 HOH HOH . D 4 HOH A 87 887 502 HOH HOH . D 4 HOH A 88 888 551 HOH HOH . D 4 HOH A 89 889 512 HOH HOH . D 4 HOH A 90 890 533 HOH HOH . D 4 HOH A 91 891 648 HOH HOH . D 4 HOH A 92 892 521 HOH HOH . D 4 HOH A 93 893 508 HOH HOH . D 4 HOH A 94 894 555 HOH HOH . D 4 HOH A 95 895 506 HOH HOH . D 4 HOH A 96 896 514 HOH HOH . D 4 HOH A 97 897 479 HOH HOH . D 4 HOH A 98 898 487 HOH HOH . D 4 HOH A 99 899 478 HOH HOH . D 4 HOH A 100 900 570 HOH HOH . D 4 HOH A 101 901 527 HOH HOH . D 4 HOH A 102 902 507 HOH HOH . D 4 HOH A 103 903 530 HOH HOH . D 4 HOH A 104 904 544 HOH HOH . D 4 HOH A 105 905 540 HOH HOH . D 4 HOH A 106 906 628 HOH HOH . D 4 HOH A 107 907 409 HOH HOH . D 4 HOH A 108 908 531 HOH HOH . D 4 HOH A 109 909 463 HOH HOH . D 4 HOH A 110 910 534 HOH HOH . D 4 HOH A 111 911 635 HOH HOH . D 4 HOH A 112 912 542 HOH HOH . D 4 HOH A 113 913 480 HOH HOH . D 4 HOH A 114 914 495 HOH HOH . D 4 HOH A 115 915 520 HOH HOH . D 4 HOH A 116 916 424 HOH HOH . D 4 HOH A 117 917 510 HOH HOH . D 4 HOH A 118 918 410 HOH HOH . D 4 HOH A 119 919 539 HOH HOH . D 4 HOH A 120 920 581 HOH HOH . D 4 HOH A 121 921 569 HOH HOH . D 4 HOH A 122 922 644 HOH HOH . D 4 HOH A 123 923 558 HOH HOH . D 4 HOH A 124 924 494 HOH HOH . D 4 HOH A 125 925 553 HOH HOH . D 4 HOH A 126 926 492 HOH HOH . D 4 HOH A 127 927 511 HOH HOH . D 4 HOH A 128 928 546 HOH HOH . D 4 HOH A 129 929 538 HOH HOH . D 4 HOH A 130 930 573 HOH HOH . D 4 HOH A 131 931 584 HOH HOH . D 4 HOH A 132 932 588 HOH HOH . D 4 HOH A 133 933 571 HOH HOH . D 4 HOH A 134 934 574 HOH HOH . D 4 HOH A 135 935 543 HOH HOH . D 4 HOH A 136 936 552 HOH HOH . D 4 HOH A 137 937 591 HOH HOH . D 4 HOH A 138 938 450 HOH HOH . D 4 HOH A 139 939 560 HOH HOH . D 4 HOH A 140 940 645 HOH HOH . D 4 HOH A 141 941 557 HOH HOH . D 4 HOH A 142 942 649 HOH HOH . D 4 HOH A 143 943 528 HOH HOH . D 4 HOH A 144 944 575 HOH HOH . D 4 HOH A 145 945 529 HOH HOH . D 4 HOH A 146 946 549 HOH HOH . D 4 HOH A 147 947 622 HOH HOH . D 4 HOH A 148 948 562 HOH HOH . D 4 HOH A 149 949 653 HOH HOH . D 4 HOH A 150 950 453 HOH HOH . D 4 HOH A 151 951 634 HOH HOH . D 4 HOH A 152 952 580 HOH HOH . D 4 HOH A 153 953 493 HOH HOH . D 4 HOH A 154 954 566 HOH HOH . D 4 HOH A 155 955 650 HOH HOH . D 4 HOH A 156 956 632 HOH HOH . D 4 HOH A 157 957 598 HOH HOH . D 4 HOH A 158 958 654 HOH HOH . D 4 HOH A 159 959 600 HOH HOH . D 4 HOH A 160 960 417 HOH HOH . D 4 HOH A 161 961 599 HOH HOH . D 4 HOH A 162 962 652 HOH HOH . D 4 HOH A 163 963 470 HOH HOH . D 4 HOH A 164 964 641 HOH HOH . D 4 HOH A 165 965 624 HOH HOH . D 4 HOH A 166 966 605 HOH HOH . D 4 HOH A 167 967 486 HOH HOH . D 4 HOH A 168 968 612 HOH HOH . D 4 HOH A 169 969 611 HOH HOH . D 4 HOH A 170 970 604 HOH HOH . D 4 HOH A 171 971 629 HOH HOH . D 4 HOH A 172 972 411 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . B 2 45.531 -1.609 -4.157 1 95.29 ? C TRS 701 A 1 HETATM 2 C C1 TRS . . . B 2 46.244 -1.406 -5.5 1 101.68 ? C1 TRS 701 A 1 HETATM 3 C C2 TRS . . . B 2 44.746 -0.348 -3.746 1 90.63 ? C2 TRS 701 A 1 HETATM 4 C C3 TRS . . . B 2 46.505 -2.037 -3.058 1 94.23 ? C3 TRS 701 A 1 HETATM 5 N N TRS . . . B 2 44.542 -2.74 -4.315 1 77.44 ? N TRS 701 A 1 HETATM 6 O O1 TRS . . . B 2 45.345 -1.022 -6.534 1 99.22 ? O1 TRS 701 A 1 HETATM 7 O O2 TRS . . . B 2 45.528 0.735 -3.256 1 65.25 ? O2 TRS 701 A 1 HETATM 8 O O3 TRS . . . B 2 47.849 -2.172 -3.488 1 72.23 ? O3 TRS 701 A 1 HETATM 9 H H11 TRS . . . B 2 46.691 -2.239 -5.756 1 99.44 ? H11 TRS 701 A 1 HETATM 10 H H12 TRS . . . B 2 46.928 -0.714 -5.399 1 99.41 ? H12 TRS 701 A 1 HETATM 11 H H21 TRS . . . B 2 44.096 -0.596 -3.06 1 84.53 ? H21 TRS 701 A 1 HETATM 12 H H22 TRS . . . B 2 44.251 -0.03 -4.524 1 84.8 ? H22 TRS 701 A 1 HETATM 13 H H31 TRS . . . B 2 46.211 -2.894 -2.689 1 88.03 ? H31 TRS 701 A 1 HETATM 14 H H32 TRS . . . B 2 46.47 -1.378 -2.34 1 87.38 ? H32 TRS 701 A 1 HETATM 15 H HN1 TRS . . . B 2 44.722 -3.426 -3.751 1 82.63 ? HN1 TRS 701 A 1 HETATM 16 H HN2 TRS . . . B 2 44.563 -3.065 -5.162 1 82.65 ? HN2 TRS 701 A 1 HETATM 17 H HN3 TRS . . . B 2 43.697 -2.459 -4.148 1 82.61 ? HN3 TRS 701 A 1 HETATM 18 H HO1 TRS . . . B 2 45.789 -0.938 -7.266 0 101.57 ? HO1 TRS 701 A 1 HETATM 19 H HO2 TRS . . . B 2 45.048 1.382 -3.063 1 65.74 ? HO2 TRS 701 A 1 HETATM 20 H HO3 TRS . . . B 2 48.2 -1.303 -3.551 1 78.62 ? HO3 TRS 701 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 20 #