data_7FTA # _model_server_result.job_id 1mtA_m-N4Khs1y2eTLAFfg _model_server_result.datetime_utc '2025-01-10 16:04:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7fta # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"R","auth_seq_id":305}' # _entry.id 7FTA # _exptl.entry_id 7FTA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 147.129 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'D-GLUTAMIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.36 _cell.angle_gamma 90 _cell.entry_id 7FTA _cell.length_a 80.181 _cell.length_b 49.712 _cell.length_c 115.736 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7FTA _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,T 1 1 B,F,G,H,U 2 1 C,I,J,K,L,M,V 3 1 D,N,O,P,Q,R,S,W 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 R N N # _chem_comp.formula 'C5 H9 N O4' _chem_comp.formula_weight 147.129 _chem_comp.id DGL _chem_comp.mon_nstd_flag . _chem_comp.name 'D-GLUTAMIC ACID' _chem_comp.type 'd-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA DGL sing 83 n n N H DGL sing 84 n n N H2 DGL sing 85 n n CA C DGL sing 86 n n CA CB DGL sing 87 n n CA HA DGL sing 88 n n C O DGL doub 89 n n C OXT DGL sing 90 n n CB CG DGL sing 91 n n CB HB2 DGL sing 92 n n CB HB3 DGL sing 93 n n CG CD DGL sing 94 n n CG HG2 DGL sing 95 n n CG HG3 DGL sing 96 n n CD OE1 DGL doub 97 n n CD OE2 DGL sing 98 n n OE2 HE2 DGL sing 99 n n OXT HXT DGL sing 100 n n # _atom_sites.entry_id 7FTA _atom_sites.fract_transf_matrix[1][1] 0.012472 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000951 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020116 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008665 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 EDO A 1 301 1 EDO EDO . F 2 EDO B 1 301 2 EDO EDO . G 2 EDO B 1 302 3 EDO EDO . H 3 DGL B 1 303 1 DGL DGL . I 4 YER C 1 301 301 YER LIG . J 2 EDO C 1 302 4 EDO EDO . K 2 EDO C 1 303 7 EDO EDO . L 2 EDO C 1 304 8 EDO EDO . M 5 GLY C 1 305 1 GLY GLY . N 4 YER D 1 301 301 YER LIG . O 2 EDO D 1 302 5 EDO EDO . P 2 EDO D 1 303 6 EDO EDO . Q 6 SO4 D 1 304 1 SO4 SO4 . R 3 DGL D 1 305 2 DGL DGL . S 5 GLY D 1 306 1 GLY GLY . T 7 HOH A 1 401 257 HOH HOH . T 7 HOH A 2 402 56 HOH HOH . T 7 HOH A 3 403 4 HOH HOH . T 7 HOH A 4 404 278 HOH HOH . T 7 HOH A 5 405 203 HOH HOH . T 7 HOH A 6 406 328 HOH HOH . T 7 HOH A 7 407 77 HOH HOH . T 7 HOH A 8 408 142 HOH HOH . T 7 HOH A 9 409 160 HOH HOH . T 7 HOH A 10 410 103 HOH HOH . T 7 HOH A 11 411 251 HOH HOH . T 7 HOH A 12 412 83 HOH HOH . T 7 HOH A 13 413 296 HOH HOH . T 7 HOH A 14 414 113 HOH HOH . T 7 HOH A 15 415 232 HOH HOH . T 7 HOH A 16 416 342 HOH HOH . T 7 HOH A 17 417 134 HOH HOH . T 7 HOH A 18 418 5 HOH HOH . T 7 HOH A 19 419 37 HOH HOH . T 7 HOH A 20 420 114 HOH HOH . T 7 HOH A 21 421 67 HOH HOH . T 7 HOH A 22 422 49 HOH HOH . T 7 HOH A 23 423 353 HOH HOH . T 7 HOH A 24 424 236 HOH HOH . T 7 HOH A 25 425 289 HOH HOH . T 7 HOH A 26 426 52 HOH HOH . T 7 HOH A 27 427 310 HOH HOH . T 7 HOH A 28 428 133 HOH HOH . T 7 HOH A 29 429 348 HOH HOH . T 7 HOH A 30 430 111 HOH HOH . T 7 HOH A 31 431 360 HOH HOH . T 7 HOH A 32 432 282 HOH HOH . T 7 HOH A 33 433 316 HOH HOH . U 7 HOH B 1 401 164 HOH HOH . U 7 HOH B 2 402 190 HOH HOH . U 7 HOH B 3 403 210 HOH HOH . U 7 HOH B 4 404 214 HOH HOH . U 7 HOH B 5 405 91 HOH HOH . U 7 HOH B 6 406 372 HOH HOH . U 7 HOH B 7 407 174 HOH HOH . U 7 HOH B 8 408 57 HOH HOH . U 7 HOH B 9 409 144 HOH HOH . U 7 HOH B 10 410 171 HOH HOH . U 7 HOH B 11 411 115 HOH HOH . U 7 HOH B 12 412 165 HOH HOH . U 7 HOH B 13 413 292 HOH HOH . U 7 HOH B 14 414 211 HOH HOH . U 7 HOH B 15 415 38 HOH HOH . U 7 HOH B 16 416 199 HOH HOH . U 7 HOH B 17 417 159 HOH HOH . U 7 HOH B 18 418 95 HOH HOH . U 7 HOH B 19 419 221 HOH HOH . U 7 HOH B 20 420 92 HOH HOH . U 7 HOH B 21 421 13 HOH HOH . U 7 HOH B 22 422 96 HOH HOH . U 7 HOH B 23 423 118 HOH HOH . U 7 HOH B 24 424 63 HOH HOH . U 7 HOH B 25 425 24 HOH HOH . U 7 HOH B 26 426 285 HOH HOH . U 7 HOH B 27 427 9 HOH HOH . U 7 HOH B 28 428 15 HOH HOH . U 7 HOH B 29 429 230 HOH HOH . U 7 HOH B 30 430 18 HOH HOH . U 7 HOH B 31 431 233 HOH HOH . U 7 HOH B 32 432 188 HOH HOH . U 7 HOH B 33 433 184 HOH HOH . U 7 HOH B 34 434 333 HOH HOH . U 7 HOH B 35 435 51 HOH HOH . U 7 HOH B 36 436 161 HOH HOH . U 7 HOH B 37 437 338 HOH HOH . U 7 HOH B 38 438 162 HOH HOH . U 7 HOH B 39 439 335 HOH HOH . U 7 HOH B 40 440 272 HOH HOH . U 7 HOH B 41 441 10 HOH HOH . U 7 HOH B 42 442 39 HOH HOH . U 7 HOH B 43 443 205 HOH HOH . U 7 HOH B 44 444 274 HOH HOH . U 7 HOH B 45 445 69 HOH HOH . U 7 HOH B 46 446 45 HOH HOH . U 7 HOH B 47 447 23 HOH HOH . U 7 HOH B 48 448 152 HOH HOH . U 7 HOH B 49 449 207 HOH HOH . U 7 HOH B 50 450 105 HOH HOH . U 7 HOH B 51 451 371 HOH HOH . U 7 HOH B 52 452 76 HOH HOH . U 7 HOH B 53 453 163 HOH HOH . U 7 HOH B 54 454 85 HOH HOH . U 7 HOH B 55 455 341 HOH HOH . U 7 HOH B 56 456 309 HOH HOH . U 7 HOH B 57 457 380 HOH HOH . U 7 HOH B 58 458 258 HOH HOH . U 7 HOH B 59 459 366 HOH HOH . U 7 HOH B 60 460 376 HOH HOH . U 7 HOH B 61 461 327 HOH HOH . U 7 HOH B 62 462 231 HOH HOH . U 7 HOH B 63 463 252 HOH HOH . U 7 HOH B 64 464 299 HOH HOH . U 7 HOH B 65 465 331 HOH HOH . U 7 HOH B 66 466 166 HOH HOH . U 7 HOH B 67 467 375 HOH HOH . U 7 HOH B 68 468 363 HOH HOH . U 7 HOH B 69 469 88 HOH HOH . U 7 HOH B 70 470 295 HOH HOH . U 7 HOH B 71 471 209 HOH HOH . U 7 HOH B 72 472 127 HOH HOH . U 7 HOH B 73 473 61 HOH HOH . U 7 HOH B 74 474 93 HOH HOH . U 7 HOH B 75 475 102 HOH HOH . U 7 HOH B 76 476 143 HOH HOH . U 7 HOH B 77 477 378 HOH HOH . U 7 HOH B 78 478 137 HOH HOH . U 7 HOH B 79 479 82 HOH HOH . U 7 HOH B 80 480 254 HOH HOH . U 7 HOH B 81 481 32 HOH HOH . U 7 HOH B 82 482 280 HOH HOH . U 7 HOH B 83 483 22 HOH HOH . U 7 HOH B 84 484 362 HOH HOH . U 7 HOH B 85 485 235 HOH HOH . U 7 HOH B 86 486 240 HOH HOH . V 7 HOH C 1 401 79 HOH HOH . V 7 HOH C 2 402 35 HOH HOH . V 7 HOH C 3 403 191 HOH HOH . V 7 HOH C 4 404 201 HOH HOH . V 7 HOH C 5 405 339 HOH HOH . V 7 HOH C 6 406 8 HOH HOH . V 7 HOH C 7 407 181 HOH HOH . V 7 HOH C 8 408 28 HOH HOH . V 7 HOH C 9 409 212 HOH HOH . V 7 HOH C 10 410 7 HOH HOH . V 7 HOH C 11 411 6 HOH HOH . V 7 HOH C 12 412 346 HOH HOH . V 7 HOH C 13 413 42 HOH HOH . V 7 HOH C 14 414 195 HOH HOH . V 7 HOH C 15 415 264 HOH HOH . V 7 HOH C 16 416 59 HOH HOH . V 7 HOH C 17 417 33 HOH HOH . V 7 HOH C 18 418 12 HOH HOH . V 7 HOH C 19 419 46 HOH HOH . V 7 HOH C 20 420 337 HOH HOH . V 7 HOH C 21 421 131 HOH HOH . V 7 HOH C 22 422 151 HOH HOH . V 7 HOH C 23 423 325 HOH HOH . V 7 HOH C 24 424 173 HOH HOH . V 7 HOH C 25 425 43 HOH HOH . V 7 HOH C 26 426 217 HOH HOH . V 7 HOH C 27 427 110 HOH HOH . V 7 HOH C 28 428 27 HOH HOH . V 7 HOH C 29 429 123 HOH HOH . V 7 HOH C 30 430 197 HOH HOH . V 7 HOH C 31 431 253 HOH HOH . V 7 HOH C 32 432 19 HOH HOH . V 7 HOH C 33 433 60 HOH HOH . V 7 HOH C 34 434 108 HOH HOH . V 7 HOH C 35 435 68 HOH HOH . V 7 HOH C 36 436 100 HOH HOH . V 7 HOH C 37 437 288 HOH HOH . V 7 HOH C 38 438 138 HOH HOH . V 7 HOH C 39 439 321 HOH HOH . V 7 HOH C 40 440 293 HOH HOH . V 7 HOH C 41 441 90 HOH HOH . V 7 HOH C 42 442 178 HOH HOH . V 7 HOH C 43 443 124 HOH HOH . V 7 HOH C 44 444 50 HOH HOH . V 7 HOH C 45 445 54 HOH HOH . V 7 HOH C 46 446 66 HOH HOH . V 7 HOH C 47 447 129 HOH HOH . V 7 HOH C 48 448 30 HOH HOH . V 7 HOH C 49 449 284 HOH HOH . V 7 HOH C 50 450 36 HOH HOH . V 7 HOH C 51 451 186 HOH HOH . V 7 HOH C 52 452 313 HOH HOH . V 7 HOH C 53 453 350 HOH HOH . V 7 HOH C 54 454 368 HOH HOH . V 7 HOH C 55 455 358 HOH HOH . V 7 HOH C 56 456 136 HOH HOH . V 7 HOH C 57 457 305 HOH HOH . W 7 HOH D 1 401 344 HOH HOH . W 7 HOH D 2 402 202 HOH HOH . W 7 HOH D 3 403 126 HOH HOH . W 7 HOH D 4 404 11 HOH HOH . W 7 HOH D 5 405 182 HOH HOH . W 7 HOH D 6 406 238 HOH HOH . W 7 HOH D 7 407 169 HOH HOH . W 7 HOH D 8 408 185 HOH HOH . W 7 HOH D 9 409 330 HOH HOH . W 7 HOH D 10 410 298 HOH HOH . W 7 HOH D 11 411 351 HOH HOH . W 7 HOH D 12 412 167 HOH HOH . W 7 HOH D 13 413 154 HOH HOH . W 7 HOH D 14 414 16 HOH HOH . W 7 HOH D 15 415 189 HOH HOH . W 7 HOH D 16 416 329 HOH HOH . W 7 HOH D 17 417 176 HOH HOH . W 7 HOH D 18 418 222 HOH HOH . W 7 HOH D 19 419 367 HOH HOH . W 7 HOH D 20 420 320 HOH HOH . W 7 HOH D 21 421 158 HOH HOH . W 7 HOH D 22 422 352 HOH HOH . W 7 HOH D 23 423 262 HOH HOH . W 7 HOH D 24 424 25 HOH HOH . W 7 HOH D 25 425 266 HOH HOH . W 7 HOH D 26 426 112 HOH HOH . W 7 HOH D 27 427 364 HOH HOH . W 7 HOH D 28 428 170 HOH HOH . W 7 HOH D 29 429 80 HOH HOH . W 7 HOH D 30 430 276 HOH HOH . W 7 HOH D 31 431 183 HOH HOH . W 7 HOH D 32 432 192 HOH HOH . W 7 HOH D 33 433 47 HOH HOH . W 7 HOH D 34 434 175 HOH HOH . W 7 HOH D 35 435 270 HOH HOH . W 7 HOH D 36 436 234 HOH HOH . W 7 HOH D 37 437 324 HOH HOH . W 7 HOH D 38 438 248 HOH HOH . W 7 HOH D 39 439 75 HOH HOH . W 7 HOH D 40 440 84 HOH HOH . W 7 HOH D 41 441 271 HOH HOH . W 7 HOH D 42 442 343 HOH HOH . W 7 HOH D 43 443 26 HOH HOH . W 7 HOH D 44 444 227 HOH HOH . W 7 HOH D 45 445 370 HOH HOH . W 7 HOH D 46 446 379 HOH HOH . W 7 HOH D 47 447 283 HOH HOH . W 7 HOH D 48 448 261 HOH HOH . W 7 HOH D 49 449 139 HOH HOH . W 7 HOH D 50 450 94 HOH HOH . W 7 HOH D 51 451 269 HOH HOH . W 7 HOH D 52 452 20 HOH HOH . W 7 HOH D 53 453 147 HOH HOH . W 7 HOH D 54 454 65 HOH HOH . W 7 HOH D 55 455 260 HOH HOH . W 7 HOH D 56 456 237 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N DGL . . . R 3 13.933 -33.172 0.479 1 114.5 ? N DGL 305 D 1 HETATM 2 C CA DGL . . . R 3 12.955 -32.42 -0.355 1 110.12 ? CA DGL 305 D 1 HETATM 3 C C DGL . . . R 3 12.443 -31.195 0.421 1 92.71 ? C DGL 305 D 1 HETATM 4 O O DGL . . . R 3 11.634 -30.418 -0.19 1 72.44 ? O DGL 305 D 1 HETATM 5 C CB DGL . . . R 3 13.605 -31.992 -1.671 1 123.58 ? CB DGL 305 D 1 HETATM 6 C CG DGL . . . R 3 14.854 -31.14 -1.485 1 123.62 ? CG DGL 305 D 1 HETATM 7 C CD DGL . . . R 3 15.464 -30.591 -2.765 1 113.94 ? CD DGL 305 D 1 HETATM 8 O OE1 DGL . . . R 3 14.808 -30.708 -3.84 1 93.49 ? OE1 DGL 305 D 1 HETATM 9 O OE2 DGL . . . R 3 16.588 -30.026 -2.679 1 99.74 ? OE2 DGL 305 D 1 HETATM 10 O OXT DGL . . . R 3 12.875 -31.058 1.609 1 67.57 ? OXT DGL 305 D 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 387 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 10 #