data_7FTD # _model_server_result.job_id QXa6P3KjSi0zrJcfuV0jhQ _model_server_result.datetime_utc '2024-11-17 00:40:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ftd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":302}' # _entry.id 7FTD # _exptl.entry_id 7FTD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.61 _cell.angle_gamma 90 _cell.entry_id 7FTD _cell.length_a 80.12 _cell.length_b 49.37 _cell.length_c 115.54 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7FTD _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,T 1 1 B,G,H,I,U 2 1 C,J,K,L,V 3 1 D,M,N,O,P,Q,R,S,W 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N ? 3 H N N ? 3 J N N ? 3 K N N ? 3 M N N ? 3 N N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 101 n n C1 C2 EDO sing 102 n n C1 H11 EDO sing 103 n n C1 H12 EDO sing 104 n n O1 HO1 EDO sing 105 n n C2 O2 EDO sing 106 n n C2 H21 EDO sing 107 n n C2 H22 EDO sing 108 n n O2 HO2 EDO sing 109 n n # _atom_sites.entry_id 7FTD _atom_sites.fract_transf_matrix[1][1] 0.012481 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001006 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020255 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008683 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 YG0 A 1 301 301 YG0 LIG . F 3 EDO A 1 302 1 EDO EDO . G 3 EDO B 1 301 2 EDO EDO . H 3 EDO B 1 302 3 EDO EDO . I 4 DGL B 1 303 1 DGL DGL . J 3 EDO C 1 301 4 EDO EDO . K 3 EDO C 1 302 7 EDO EDO . L 5 GLY C 1 303 1 GLY GLY . M 3 EDO D 1 301 5 EDO EDO . N 3 EDO D 1 302 6 EDO EDO . O 6 SO4 D 1 303 1 SO4 SO4 . P 6 SO4 D 1 304 2 SO4 SO4 . Q 7 ALA D 1 305 1 ALA ALA . R 4 DGL D 1 306 2 DGL DGL . S 5 GLY D 1 307 1 GLY GLY . T 8 HOH A 1 401 296 HOH HOH . T 8 HOH A 2 402 83 HOH HOH . T 8 HOH A 3 403 236 HOH HOH . T 8 HOH A 4 404 56 HOH HOH . T 8 HOH A 5 405 282 HOH HOH . T 8 HOH A 6 406 133 HOH HOH . T 8 HOH A 7 407 321 HOH HOH . T 8 HOH A 8 408 317 HOH HOH . T 8 HOH A 9 409 160 HOH HOH . T 8 HOH A 10 410 279 HOH HOH . T 8 HOH A 11 411 312 HOH HOH . T 8 HOH A 12 412 40 HOH HOH . T 8 HOH A 13 413 14 HOH HOH . T 8 HOH A 14 414 380 HOH HOH . T 8 HOH A 15 415 275 HOH HOH . T 8 HOH A 16 416 173 HOH HOH . T 8 HOH A 17 417 328 HOH HOH . T 8 HOH A 18 418 52 HOH HOH . T 8 HOH A 19 419 136 HOH HOH . T 8 HOH A 20 420 77 HOH HOH . T 8 HOH A 21 421 103 HOH HOH . T 8 HOH A 22 422 212 HOH HOH . T 8 HOH A 23 423 120 HOH HOH . T 8 HOH A 24 424 134 HOH HOH . T 8 HOH A 25 425 353 HOH HOH . T 8 HOH A 26 426 5 HOH HOH . T 8 HOH A 27 427 278 HOH HOH . T 8 HOH A 28 428 365 HOH HOH . T 8 HOH A 29 429 146 HOH HOH . T 8 HOH A 30 430 117 HOH HOH . T 8 HOH A 31 431 310 HOH HOH . T 8 HOH A 32 432 49 HOH HOH . T 8 HOH A 33 433 257 HOH HOH . T 8 HOH A 34 434 113 HOH HOH . T 8 HOH A 35 435 67 HOH HOH . T 8 HOH A 36 436 217 HOH HOH . T 8 HOH A 37 437 277 HOH HOH . T 8 HOH A 38 438 342 HOH HOH . T 8 HOH A 39 439 294 HOH HOH . U 8 HOH B 1 401 164 HOH HOH . U 8 HOH B 2 402 190 HOH HOH . U 8 HOH B 3 403 290 HOH HOH . U 8 HOH B 4 404 260 HOH HOH . U 8 HOH B 5 405 379 HOH HOH . U 8 HOH B 6 406 179 HOH HOH . U 8 HOH B 7 407 157 HOH HOH . U 8 HOH B 8 408 57 HOH HOH . U 8 HOH B 9 409 74 HOH HOH . U 8 HOH B 10 410 214 HOH HOH . U 8 HOH B 11 411 188 HOH HOH . U 8 HOH B 12 412 211 HOH HOH . U 8 HOH B 13 413 171 HOH HOH . U 8 HOH B 14 414 38 HOH HOH . U 8 HOH B 15 415 51 HOH HOH . U 8 HOH B 16 416 230 HOH HOH . U 8 HOH B 17 417 143 HOH HOH . U 8 HOH B 18 418 323 HOH HOH . U 8 HOH B 19 419 258 HOH HOH . U 8 HOH B 20 420 318 HOH HOH . U 8 HOH B 21 421 335 HOH HOH . U 8 HOH B 22 422 184 HOH HOH . U 8 HOH B 23 423 165 HOH HOH . U 8 HOH B 24 424 93 HOH HOH . U 8 HOH B 25 425 272 HOH HOH . U 8 HOH B 26 426 9 HOH HOH . U 8 HOH B 27 427 162 HOH HOH . U 8 HOH B 28 428 115 HOH HOH . U 8 HOH B 29 429 10 HOH HOH . U 8 HOH B 30 430 104 HOH HOH . U 8 HOH B 31 431 17 HOH HOH . U 8 HOH B 32 432 24 HOH HOH . U 8 HOH B 33 433 291 HOH HOH . U 8 HOH B 34 434 95 HOH HOH . U 8 HOH B 35 435 209 HOH HOH . U 8 HOH B 36 436 210 HOH HOH . U 8 HOH B 37 437 29 HOH HOH . U 8 HOH B 38 438 1 HOH HOH . U 8 HOH B 39 439 91 HOH HOH . U 8 HOH B 40 440 159 HOH HOH . U 8 HOH B 41 441 92 HOH HOH . U 8 HOH B 42 442 105 HOH HOH . U 8 HOH B 43 443 207 HOH HOH . U 8 HOH B 44 444 235 HOH HOH . U 8 HOH B 45 445 58 HOH HOH . U 8 HOH B 46 446 96 HOH HOH . U 8 HOH B 47 447 135 HOH HOH . U 8 HOH B 48 448 118 HOH HOH . U 8 HOH B 49 449 76 HOH HOH . U 8 HOH B 50 450 45 HOH HOH . U 8 HOH B 51 451 39 HOH HOH . U 8 HOH B 52 452 205 HOH HOH . U 8 HOH B 53 453 285 HOH HOH . U 8 HOH B 54 454 18 HOH HOH . U 8 HOH B 55 455 128 HOH HOH . U 8 HOH B 56 456 70 HOH HOH . U 8 HOH B 57 457 299 HOH HOH . U 8 HOH B 58 458 220 HOH HOH . U 8 HOH B 59 459 240 HOH HOH . U 8 HOH B 60 460 23 HOH HOH . U 8 HOH B 61 461 61 HOH HOH . U 8 HOH B 62 462 163 HOH HOH . U 8 HOH B 63 463 127 HOH HOH . U 8 HOH B 64 464 208 HOH HOH . U 8 HOH B 65 465 206 HOH HOH . U 8 HOH B 66 466 3 HOH HOH . U 8 HOH B 67 467 378 HOH HOH . U 8 HOH B 68 468 332 HOH HOH . U 8 HOH B 69 469 37 HOH HOH . U 8 HOH B 70 470 232 HOH HOH . U 8 HOH B 71 471 189 HOH HOH . U 8 HOH B 72 472 102 HOH HOH . U 8 HOH B 73 473 338 HOH HOH . U 8 HOH B 74 474 376 HOH HOH . U 8 HOH B 75 475 333 HOH HOH . U 8 HOH B 76 476 82 HOH HOH . U 8 HOH B 77 477 85 HOH HOH . U 8 HOH B 78 478 331 HOH HOH . U 8 HOH B 79 479 226 HOH HOH . U 8 HOH B 80 480 221 HOH HOH . U 8 HOH B 81 481 198 HOH HOH . U 8 HOH B 82 482 297 HOH HOH . U 8 HOH B 83 483 259 HOH HOH . U 8 HOH B 84 484 372 HOH HOH . U 8 HOH B 85 485 63 HOH HOH . U 8 HOH B 86 486 341 HOH HOH . U 8 HOH B 87 487 252 HOH HOH . U 8 HOH B 88 488 94 HOH HOH . U 8 HOH B 89 489 152 HOH HOH . U 8 HOH B 90 490 22 HOH HOH . U 8 HOH B 91 491 366 HOH HOH . U 8 HOH B 92 492 280 HOH HOH . U 8 HOH B 93 493 69 HOH HOH . U 8 HOH B 94 494 254 HOH HOH . U 8 HOH B 95 495 130 HOH HOH . U 8 HOH B 96 496 362 HOH HOH . U 8 HOH B 97 497 306 HOH HOH . U 8 HOH B 98 498 371 HOH HOH . U 8 HOH B 99 499 375 HOH HOH . U 8 HOH B 100 500 349 HOH HOH . V 8 HOH C 1 401 42 HOH HOH . V 8 HOH C 2 402 62 HOH HOH . V 8 HOH C 3 403 64 HOH HOH . V 8 HOH C 4 404 293 HOH HOH . V 8 HOH C 5 405 46 HOH HOH . V 8 HOH C 6 406 54 HOH HOH . V 8 HOH C 7 407 8 HOH HOH . V 8 HOH C 8 408 6 HOH HOH . V 8 HOH C 9 409 12 HOH HOH . V 8 HOH C 10 410 264 HOH HOH . V 8 HOH C 11 411 288 HOH HOH . V 8 HOH C 12 412 33 HOH HOH . V 8 HOH C 13 413 307 HOH HOH . V 8 HOH C 14 414 191 HOH HOH . V 8 HOH C 15 415 27 HOH HOH . V 8 HOH C 16 416 265 HOH HOH . V 8 HOH C 17 417 149 HOH HOH . V 8 HOH C 18 418 110 HOH HOH . V 8 HOH C 19 419 100 HOH HOH . V 8 HOH C 20 420 339 HOH HOH . V 8 HOH C 21 421 7 HOH HOH . V 8 HOH C 22 422 181 HOH HOH . V 8 HOH C 23 423 97 HOH HOH . V 8 HOH C 24 424 114 HOH HOH . V 8 HOH C 25 425 43 HOH HOH . V 8 HOH C 26 426 350 HOH HOH . V 8 HOH C 27 427 66 HOH HOH . V 8 HOH C 28 428 71 HOH HOH . V 8 HOH C 29 429 60 HOH HOH . V 8 HOH C 30 430 151 HOH HOH . V 8 HOH C 31 431 337 HOH HOH . V 8 HOH C 32 432 354 HOH HOH . V 8 HOH C 33 433 19 HOH HOH . V 8 HOH C 34 434 193 HOH HOH . V 8 HOH C 35 435 251 HOH HOH . V 8 HOH C 36 436 361 HOH HOH . V 8 HOH C 37 437 35 HOH HOH . V 8 HOH C 38 438 195 HOH HOH . V 8 HOH C 39 439 123 HOH HOH . V 8 HOH C 40 440 358 HOH HOH . V 8 HOH C 41 441 68 HOH HOH . V 8 HOH C 42 442 141 HOH HOH . V 8 HOH C 43 443 59 HOH HOH . V 8 HOH C 44 444 201 HOH HOH . V 8 HOH C 45 445 90 HOH HOH . V 8 HOH C 46 446 197 HOH HOH . V 8 HOH C 47 447 168 HOH HOH . V 8 HOH C 48 448 79 HOH HOH . V 8 HOH C 49 449 125 HOH HOH . V 8 HOH C 50 450 111 HOH HOH . V 8 HOH C 51 451 119 HOH HOH . V 8 HOH C 52 452 186 HOH HOH . V 8 HOH C 53 453 36 HOH HOH . V 8 HOH C 54 454 109 HOH HOH . V 8 HOH C 55 455 346 HOH HOH . V 8 HOH C 56 456 30 HOH HOH . V 8 HOH C 57 457 284 HOH HOH . V 8 HOH C 58 458 315 HOH HOH . V 8 HOH C 59 459 313 HOH HOH . V 8 HOH C 60 460 334 HOH HOH . V 8 HOH C 61 461 273 HOH HOH . W 8 HOH D 1 401 2 HOH HOH . W 8 HOH D 2 402 202 HOH HOH . W 8 HOH D 3 403 145 HOH HOH . W 8 HOH D 4 404 215 HOH HOH . W 8 HOH D 5 405 148 HOH HOH . W 8 HOH D 6 406 271 HOH HOH . W 8 HOH D 7 407 11 HOH HOH . W 8 HOH D 8 408 20 HOH HOH . W 8 HOH D 9 409 229 HOH HOH . W 8 HOH D 10 410 98 HOH HOH . W 8 HOH D 11 411 154 HOH HOH . W 8 HOH D 12 412 180 HOH HOH . W 8 HOH D 13 413 196 HOH HOH . W 8 HOH D 14 414 239 HOH HOH . W 8 HOH D 15 415 16 HOH HOH . W 8 HOH D 16 416 364 HOH HOH . W 8 HOH D 17 417 370 HOH HOH . W 8 HOH D 18 418 343 HOH HOH . W 8 HOH D 19 419 25 HOH HOH . W 8 HOH D 20 420 80 HOH HOH . W 8 HOH D 21 421 352 HOH HOH . W 8 HOH D 22 422 167 HOH HOH . W 8 HOH D 23 423 176 HOH HOH . W 8 HOH D 24 424 182 HOH HOH . W 8 HOH D 25 425 303 HOH HOH . W 8 HOH D 26 426 311 HOH HOH . W 8 HOH D 27 427 223 HOH HOH . W 8 HOH D 28 428 268 HOH HOH . W 8 HOH D 29 429 44 HOH HOH . W 8 HOH D 30 430 31 HOH HOH . W 8 HOH D 31 431 222 HOH HOH . W 8 HOH D 32 432 185 HOH HOH . W 8 HOH D 33 433 86 HOH HOH . W 8 HOH D 34 434 147 HOH HOH . W 8 HOH D 35 435 248 HOH HOH . W 8 HOH D 36 436 283 HOH HOH . W 8 HOH D 37 437 183 HOH HOH . W 8 HOH D 38 438 255 HOH HOH . W 8 HOH D 39 439 329 HOH HOH . W 8 HOH D 40 440 187 HOH HOH . W 8 HOH D 41 441 204 HOH HOH . W 8 HOH D 42 442 237 HOH HOH . W 8 HOH D 43 443 233 HOH HOH . W 8 HOH D 44 444 158 HOH HOH . W 8 HOH D 45 445 295 HOH HOH . W 8 HOH D 46 446 112 HOH HOH . W 8 HOH D 47 447 320 HOH HOH . W 8 HOH D 48 448 170 HOH HOH . W 8 HOH D 49 449 15 HOH HOH . W 8 HOH D 50 450 263 HOH HOH . W 8 HOH D 51 451 330 HOH HOH . W 8 HOH D 52 452 319 HOH HOH . W 8 HOH D 53 453 276 HOH HOH . W 8 HOH D 54 454 169 HOH HOH . W 8 HOH D 55 455 304 HOH HOH . W 8 HOH D 56 456 286 HOH HOH . W 8 HOH D 57 457 161 HOH HOH . W 8 HOH D 58 458 344 HOH HOH . W 8 HOH D 59 459 122 HOH HOH . W 8 HOH D 60 460 26 HOH HOH . W 8 HOH D 61 461 309 HOH HOH . W 8 HOH D 62 462 192 HOH HOH . W 8 HOH D 63 463 359 HOH HOH . W 8 HOH D 64 464 32 HOH HOH . W 8 HOH D 65 465 200 HOH HOH . W 8 HOH D 66 466 116 HOH HOH . W 8 HOH D 67 467 270 HOH HOH . W 8 HOH D 68 468 175 HOH HOH . W 8 HOH D 69 469 47 HOH HOH . W 8 HOH D 70 470 246 HOH HOH . W 8 HOH D 71 471 340 HOH HOH . W 8 HOH D 72 472 139 HOH HOH . W 8 HOH D 73 473 199 HOH HOH . W 8 HOH D 74 474 247 HOH HOH . W 8 HOH D 75 475 374 HOH HOH . W 8 HOH D 76 476 72 HOH HOH . W 8 HOH D 77 477 231 HOH HOH . W 8 HOH D 78 478 373 HOH HOH . W 8 HOH D 79 479 324 HOH HOH . W 8 HOH D 80 480 227 HOH HOH . W 8 HOH D 81 481 243 HOH HOH . W 8 HOH D 82 482 269 HOH HOH . W 8 HOH D 83 483 347 HOH HOH . W 8 HOH D 84 484 281 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . F 3 -16.75 -5.348 -40.057 1 54.27 ? C1 EDO 302 A 1 HETATM 2 O O1 EDO . . . F 3 -17.137 -4.999 -38.738 1 47.14 ? O1 EDO 302 A 1 HETATM 3 C C2 EDO . . . F 3 -17.739 -4.911 -41.088 1 49.85 ? C2 EDO 302 A 1 HETATM 4 O O2 EDO . . . F 3 -18.949 -4.382 -40.569 1 52.45 ? O2 EDO 302 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 349 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #