data_7FUG # _model_server_result.job_id f3YXzZfXOZwqx5QB95N1WA _model_server_result.datetime_utc '2024-12-27 04:24:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7fug # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":602}' # _entry.id 7FUG # _exptl.entry_id 7FUG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 445.904 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (8S)-5-benzyl-2-({[(5P)-2-chloro-5-(1-methyl-1H-pyrazol-3-yl)phenyl]methyl}amino)[1,2,4]triazolo[1,5-a]pyrimidin-7(4H)-one _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.48 _cell.angle_gamma 90 _cell.entry_id 7FUG _cell.length_a 42.35 _cell.length_b 156.61 _cell.length_c 58.39 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7FUG _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 230 A HIS 390 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc2 A SG CYS 236 A CYS 396 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc3 A SG CYS 237 A CYS 397 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc4 A SG CYS 244 A CYS 404 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc5 B NE2 HIS 230 B HIS 390 1_555 E ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? metalc ? metalc6 B SG CYS 236 B CYS 396 1_555 E ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc7 B SG CYS 237 B CYS 397 1_555 E ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc8 B SG CYS 244 B CYS 404 1_555 E ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? # _chem_comp.formula 'C23 H20 Cl N7 O' _chem_comp.formula_weight 445.904 _chem_comp.id YP8 _chem_comp.mon_nstd_flag . _chem_comp.name (8S)-5-benzyl-2-({[(5P)-2-chloro-5-(1-methyl-1H-pyrazol-3-yl)phenyl]methyl}amino)[1,2,4]triazolo[1,5-a]pyrimidin-7(4H)-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 YP8 sing 376 n n C1 C15 YP8 doub 377 n y C1 C19 YP8 sing 378 n y C2 N3 YP8 sing 379 n n N3 C4 YP8 sing 380 n n C4 N5 YP8 doub 381 n y C4 N13 YP8 sing 382 n y N5 N6 YP8 sing 383 n y N6 C7 YP8 sing 384 n n N6 C12 YP8 sing 385 n y C7 O8 YP8 doub 386 n n C7 C9 YP8 sing 387 n n C9 C10 YP8 doub 388 n n C10 N11 YP8 sing 389 n n C10 C14 YP8 sing 390 n n N11 C12 YP8 sing 391 n n C12 N13 YP8 doub 392 n y C14 C27 YP8 sing 393 n n C15 C16 YP8 sing 394 n y C16 C17 YP8 doub 395 n y C16 C21 YP8 sing 396 n n C17 C18 YP8 sing 397 n y C18 C19 YP8 doub 398 n y C19 CL20 YP8 sing 399 n n C21 C22 YP8 sing 400 n y C21 N25 YP8 doub 401 n y C22 C23 YP8 doub 402 n y C23 N24 YP8 sing 403 n y N24 N25 YP8 sing 404 n y N24 C26 YP8 sing 405 n n C27 C28 YP8 doub 406 n y C27 C32 YP8 sing 407 n y C28 C29 YP8 sing 408 n y C29 C30 YP8 doub 409 n y C30 C31 YP8 sing 410 n y C31 C32 YP8 doub 411 n y C15 H40 YP8 sing 412 n n C17 H41 YP8 sing 413 n n C18 H42 YP8 sing 414 n n C22 H43 YP8 sing 415 n n C23 H44 YP8 sing 416 n n C26 H45 YP8 sing 417 n n C26 H46 YP8 sing 418 n n C26 H47 YP8 sing 419 n n C28 H48 YP8 sing 420 n n C14 H38 YP8 sing 421 n n C14 H39 YP8 sing 422 n n C2 H33 YP8 sing 423 n n C2 H34 YP8 sing 424 n n C29 H49 YP8 sing 425 n n C30 H50 YP8 sing 426 n n C31 H51 YP8 sing 427 n n C32 H52 YP8 sing 428 n n C9 H36 YP8 sing 429 n n N11 H37 YP8 sing 430 n n N3 H35 YP8 sing 431 n n # _atom_sites.entry_id 7FUG _atom_sites.fract_transf_matrix[1][1] 0.023613 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001437 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006385 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017158 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 601 600 ZN ZN . D 3 YP8 A 1 602 701 YP8 L0R . E 2 ZN B 1 601 600 ZN ZN . F 3 YP8 B 1 602 701 YP8 L0R . G 4 HOH A 1 701 47 HOH HOH . G 4 HOH A 2 702 11 HOH HOH . G 4 HOH A 3 703 35 HOH HOH . G 4 HOH A 4 704 41 HOH HOH . G 4 HOH A 5 705 15 HOH HOH . G 4 HOH A 6 706 3 HOH HOH . G 4 HOH A 7 707 4 HOH HOH . G 4 HOH A 8 708 29 HOH HOH . G 4 HOH A 9 709 5 HOH HOH . G 4 HOH A 10 710 45 HOH HOH . G 4 HOH A 11 711 13 HOH HOH . G 4 HOH A 12 712 2 HOH HOH . G 4 HOH A 13 713 44 HOH HOH . G 4 HOH A 14 714 33 HOH HOH . G 4 HOH A 15 715 8 HOH HOH . G 4 HOH A 16 716 17 HOH HOH . G 4 HOH A 17 717 6 HOH HOH . G 4 HOH A 18 718 30 HOH HOH . G 4 HOH A 19 719 36 HOH HOH . G 4 HOH A 20 720 18 HOH HOH . G 4 HOH A 21 721 19 HOH HOH . G 4 HOH A 22 722 24 HOH HOH . G 4 HOH A 23 723 12 HOH HOH . G 4 HOH A 24 724 34 HOH HOH . G 4 HOH A 25 725 32 HOH HOH . G 4 HOH A 26 726 43 HOH HOH . G 4 HOH A 27 727 31 HOH HOH . G 4 HOH A 28 728 23 HOH HOH . H 4 HOH B 1 701 20 HOH HOH . H 4 HOH B 2 702 1 HOH HOH . H 4 HOH B 3 703 25 HOH HOH . H 4 HOH B 4 704 40 HOH HOH . H 4 HOH B 5 705 9 HOH HOH . H 4 HOH B 6 706 21 HOH HOH . H 4 HOH B 7 707 7 HOH HOH . H 4 HOH B 8 708 10 HOH HOH . H 4 HOH B 9 709 28 HOH HOH . H 4 HOH B 10 710 46 HOH HOH . H 4 HOH B 11 711 27 HOH HOH . H 4 HOH B 12 712 16 HOH HOH . H 4 HOH B 13 713 39 HOH HOH . H 4 HOH B 14 714 14 HOH HOH . H 4 HOH B 15 715 26 HOH HOH . H 4 HOH B 16 716 22 HOH HOH . H 4 HOH B 17 717 42 HOH HOH . H 4 HOH B 18 718 38 HOH HOH . H 4 HOH B 19 719 37 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 YP8 . . . D 3 2.589 25.059 14.332 1 41.52 ? C10 YP8 602 A 1 HETATM 2 C C15 YP8 . . . D 3 7.561 23.853 18.006 1 52.63 ? C15 YP8 602 A 1 HETATM 3 C C16 YP8 . . . D 3 8.235 22.678 17.668 1 62.48 ? C16 YP8 602 A 1 HETATM 4 C C17 YP8 . . . D 3 9.574 22.749 17.302 1 58.75 ? C17 YP8 602 A 1 HETATM 5 C C18 YP8 . . . D 3 10.229 23.959 17.297 1 54.91 ? C18 YP8 602 A 1 HETATM 6 C C19 YP8 . . . D 3 9.546 25.11 17.636 1 68.43 ? C19 YP8 602 A 1 HETATM 7 C C21 YP8 . . . D 3 7.529 21.385 17.648 1 56.05 ? C21 YP8 602 A 1 HETATM 8 C C22 YP8 . . . D 3 8.07 20.084 17.721 1 55.25 ? C22 YP8 602 A 1 HETATM 9 C C23 YP8 . . . D 3 7.007 19.245 17.609 1 53.07 ? C23 YP8 602 A 1 HETATM 10 C C26 YP8 . . . D 3 4.525 19.59 17.28 1 70.4 ? C26 YP8 602 A 1 HETATM 11 C C27 YP8 . . . D 3 1.688 26.29 12.455 1 40.01 ? C27 YP8 602 A 1 HETATM 12 C C28 YP8 . . . D 3 2.423 27.146 11.639 1 40.45 ? C28 YP8 602 A 1 HETATM 13 C C1 YP8 . . . D 3 8.202 25.095 17.995 1 50.71 ? C1 YP8 602 A 1 HETATM 14 C C12 YP8 . . . D 3 4.224 25.592 15.974 1 35.78 ? C12 YP8 602 A 1 HETATM 15 C C14 YP8 . . . D 3 2.242 24.945 12.87 1 38.67 ? C14 YP8 602 A 1 HETATM 16 C C2 YP8 . . . D 3 7.474 26.37 18.366 1 40.4 ? C2 YP8 602 A 1 HETATM 17 C C29 YP8 . . . D 3 1.918 28.385 11.275 1 47.3 ? C29 YP8 602 A 1 HETATM 18 C C30 YP8 . . . D 3 0.675 28.786 11.72 1 35.89 ? C30 YP8 602 A 1 HETATM 19 C C31 YP8 . . . D 3 -0.07 27.943 12.52 1 39.58 ? C31 YP8 602 A 1 HETATM 20 C C32 YP8 . . . D 3 0.435 26.707 12.892 1 29.77 ? C32 YP8 602 A 1 HETATM 21 C C4 YP8 . . . D 3 5.108 25.876 17.831 1 39.74 ? C4 YP8 602 A 1 HETATM 22 C C7 YP8 . . . D 3 2 24.888 16.705 1 43.18 ? C7 YP8 602 A 1 HETATM 23 C C9 YP8 . . . D 3 1.688 24.772 15.31 1 39.07 ? C9 YP8 602 A 1 HETATM 24 N N11 YP8 . . . D 3 3.86 25.464 14.668 1 36.26 ? N11 YP8 602 A 1 HETATM 25 N N13 YP8 . . . D 3 5.386 25.945 16.487 1 46.07 ? N13 YP8 602 A 1 HETATM 26 N N24 YP8 . . . D 3 5.91 20.019 17.446 1 56.28 ? N24 YP8 602 A 1 HETATM 27 N N25 YP8 . . . D 3 6.202 21.344 17.463 1 58.41 ? N25 YP8 602 A 1 HETATM 28 N N3 YP8 . . . D 3 6.08 26.186 18.757 1 32.83 ? N3 YP8 602 A 1 HETATM 29 N N5 YP8 . . . D 3 3.888 25.504 18.183 1 54.2 ? N5 YP8 602 A 1 HETATM 30 N N6 YP8 . . . D 3 3.313 25.321 16.933 1 30.47 ? N6 YP8 602 A 1 HETATM 31 O O8 YP8 . . . D 3 1.238 24.663 17.655 1 50.87 ? O8 YP8 602 A 1 HETATM 32 CL CL20 YP8 . . . D 3 10.417 26.612 17.614 1 102.34 ? CL20 YP8 602 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 32 #