data_7FVN # _model_server_result.job_id DTbIEHzcomk1eT_JKI-zhA _model_server_result.datetime_utc '2024-10-10 12:15:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7fvn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1901}' # _entry.id 7FVN # _exptl.entry_id 7FVN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 281.374 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(propan-2-yl)-4-(thiophene-2-carbonyl)piperazine-1-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.84 _cell.angle_gamma 90 _cell.entry_id 7FVN _cell.length_a 82.019 _cell.length_b 27.387 _cell.length_c 56.312 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7FVN _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C13 H19 N3 O2 S' _chem_comp.formula_weight 281.374 _chem_comp.id ZPB _chem_comp.mon_nstd_flag . _chem_comp.name N-(propan-2-yl)-4-(thiophene-2-carbonyl)piperazine-1-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 ZPB sing 376 n n C2 C3 ZPB sing 377 n n C2 N1 ZPB sing 378 n n N1 C4 ZPB sing 379 n n C4 O1 ZPB doub 380 n n C4 N2 ZPB sing 381 n n N2 C5 ZPB sing 382 n n C5 C6 ZPB sing 383 n n C6 N3 ZPB sing 384 n n N3 C7 ZPB sing 385 n n C7 C8 ZPB sing 386 n n N3 C9 ZPB sing 387 n n C9 O2 ZPB doub 388 n n C9 C10 ZPB sing 389 n n C10 C11 ZPB doub 390 n y C11 C12 ZPB sing 391 n y C12 C13 ZPB doub 392 n y C13 S1 ZPB sing 393 n y N2 C8 ZPB sing 394 n n C10 S1 ZPB sing 395 n y N1 H8 ZPB sing 396 n n C5 H10 ZPB sing 397 n n C5 H9 ZPB sing 398 n n C6 H12 ZPB sing 399 n n C6 H11 ZPB sing 400 n n C7 H14 ZPB sing 401 n n C7 H13 ZPB sing 402 n n C8 H16 ZPB sing 403 n n C8 H15 ZPB sing 404 n n C13 H19 ZPB sing 405 n n C1 H2 ZPB sing 406 n n C1 H3 ZPB sing 407 n n C1 H1 ZPB sing 408 n n C11 H17 ZPB sing 409 n n C12 H18 ZPB sing 410 n n C2 H4 ZPB sing 411 n n C3 H5 ZPB sing 412 n n C3 H6 ZPB sing 413 n n C3 H7 ZPB sing 414 n n # _atom_sites.entry_id 7FVN _atom_sites.fract_transf_matrix[1][1] 0.012192 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002115 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.036514 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018023 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZPB A 1 1901 1901 ZPB LIG . C 3 HOH A 1 2001 22 HOH HOH . C 3 HOH A 2 2002 31 HOH HOH . C 3 HOH A 3 2003 30 HOH HOH . C 3 HOH A 4 2004 1771 HOH HOH . C 3 HOH A 5 2005 1653 HOH HOH . C 3 HOH A 6 2006 1614 HOH HOH . C 3 HOH A 7 2007 20 HOH HOH . C 3 HOH A 8 2008 1648 HOH HOH . C 3 HOH A 9 2009 1624 HOH HOH . C 3 HOH A 10 2010 1739 HOH HOH . C 3 HOH A 11 2011 4 HOH HOH . C 3 HOH A 12 2012 1665 HOH HOH . C 3 HOH A 13 2013 1610 HOH HOH . C 3 HOH A 14 2014 1692 HOH HOH . C 3 HOH A 15 2015 1608 HOH HOH . C 3 HOH A 16 2016 1609 HOH HOH . C 3 HOH A 17 2017 21 HOH HOH . C 3 HOH A 18 2018 1602 HOH HOH . C 3 HOH A 19 2019 25 HOH HOH . C 3 HOH A 20 2020 1712 HOH HOH . C 3 HOH A 21 2021 1622 HOH HOH . C 3 HOH A 22 2022 1732 HOH HOH . C 3 HOH A 23 2023 1603 HOH HOH . C 3 HOH A 24 2024 1629 HOH HOH . C 3 HOH A 25 2025 1757 HOH HOH . C 3 HOH A 26 2026 1620 HOH HOH . C 3 HOH A 27 2027 1616 HOH HOH . C 3 HOH A 28 2028 1605 HOH HOH . C 3 HOH A 29 2029 1633 HOH HOH . C 3 HOH A 30 2030 7 HOH HOH . C 3 HOH A 31 2031 1627 HOH HOH . C 3 HOH A 32 2032 1638 HOH HOH . C 3 HOH A 33 2033 1718 HOH HOH . C 3 HOH A 34 2034 1676 HOH HOH . C 3 HOH A 35 2035 1678 HOH HOH . C 3 HOH A 36 2036 1625 HOH HOH . C 3 HOH A 37 2037 1626 HOH HOH . C 3 HOH A 38 2038 1655 HOH HOH . C 3 HOH A 39 2039 1634 HOH HOH . C 3 HOH A 40 2040 1612 HOH HOH . C 3 HOH A 41 2041 1615 HOH HOH . C 3 HOH A 42 2042 1644 HOH HOH . C 3 HOH A 43 2043 1632 HOH HOH . C 3 HOH A 44 2044 1607 HOH HOH . C 3 HOH A 45 2045 1613 HOH HOH . C 3 HOH A 46 2046 1663 HOH HOH . C 3 HOH A 47 2047 1628 HOH HOH . C 3 HOH A 48 2048 1658 HOH HOH . C 3 HOH A 49 2049 1617 HOH HOH . C 3 HOH A 50 2050 1660 HOH HOH . C 3 HOH A 51 2051 1649 HOH HOH . C 3 HOH A 52 2052 1623 HOH HOH . C 3 HOH A 53 2053 1673 HOH HOH . C 3 HOH A 54 2054 1645 HOH HOH . C 3 HOH A 55 2055 1747 HOH HOH . C 3 HOH A 56 2056 1664 HOH HOH . C 3 HOH A 57 2057 1674 HOH HOH . C 3 HOH A 58 2058 1619 HOH HOH . C 3 HOH A 59 2059 1677 HOH HOH . C 3 HOH A 60 2060 33 HOH HOH . C 3 HOH A 61 2061 1630 HOH HOH . C 3 HOH A 62 2062 1672 HOH HOH . C 3 HOH A 63 2063 1680 HOH HOH . C 3 HOH A 64 2064 1666 HOH HOH . C 3 HOH A 65 2065 1699 HOH HOH . C 3 HOH A 66 2066 1646 HOH HOH . C 3 HOH A 67 2067 29 HOH HOH . C 3 HOH A 68 2068 1690 HOH HOH . C 3 HOH A 69 2069 1693 HOH HOH . C 3 HOH A 70 2070 1668 HOH HOH . C 3 HOH A 71 2071 1687 HOH HOH . C 3 HOH A 72 2072 1683 HOH HOH . C 3 HOH A 73 2073 1650 HOH HOH . C 3 HOH A 74 2074 27 HOH HOH . C 3 HOH A 75 2075 1640 HOH HOH . C 3 HOH A 76 2076 24 HOH HOH . C 3 HOH A 77 2077 1675 HOH HOH . C 3 HOH A 78 2078 1714 HOH HOH . C 3 HOH A 79 2079 1701 HOH HOH . C 3 HOH A 80 2080 1733 HOH HOH . C 3 HOH A 81 2081 1671 HOH HOH . C 3 HOH A 82 2082 1681 HOH HOH . C 3 HOH A 83 2083 13 HOH HOH . C 3 HOH A 84 2084 1728 HOH HOH . C 3 HOH A 85 2085 26 HOH HOH . C 3 HOH A 86 2086 1643 HOH HOH . C 3 HOH A 87 2087 1662 HOH HOH . C 3 HOH A 88 2088 1652 HOH HOH . C 3 HOH A 89 2089 1750 HOH HOH . C 3 HOH A 90 2090 1689 HOH HOH . C 3 HOH A 91 2091 1694 HOH HOH . C 3 HOH A 92 2092 19 HOH HOH . C 3 HOH A 93 2093 1606 HOH HOH . C 3 HOH A 94 2094 1651 HOH HOH . C 3 HOH A 95 2095 1688 HOH HOH . C 3 HOH A 96 2096 1725 HOH HOH . C 3 HOH A 97 2097 1621 HOH HOH . C 3 HOH A 98 2098 1637 HOH HOH . C 3 HOH A 99 2099 1721 HOH HOH . C 3 HOH A 100 2100 1686 HOH HOH . C 3 HOH A 101 2101 1711 HOH HOH . C 3 HOH A 102 2102 1682 HOH HOH . C 3 HOH A 103 2103 1700 HOH HOH . C 3 HOH A 104 2104 1685 HOH HOH . C 3 HOH A 105 2105 1661 HOH HOH . C 3 HOH A 106 2106 1669 HOH HOH . C 3 HOH A 107 2107 1601 HOH HOH . C 3 HOH A 108 2108 1706 HOH HOH . C 3 HOH A 109 2109 1708 HOH HOH . C 3 HOH A 110 2110 1741 HOH HOH . C 3 HOH A 111 2111 1704 HOH HOH . C 3 HOH A 112 2112 10 HOH HOH . C 3 HOH A 113 2113 1667 HOH HOH . C 3 HOH A 114 2114 1719 HOH HOH . C 3 HOH A 115 2115 1737 HOH HOH . C 3 HOH A 116 2116 1727 HOH HOH . C 3 HOH A 117 2117 1713 HOH HOH . C 3 HOH A 118 2118 1702 HOH HOH . C 3 HOH A 119 2119 1735 HOH HOH . C 3 HOH A 120 2120 1738 HOH HOH . C 3 HOH A 121 2121 1697 HOH HOH . C 3 HOH A 122 2122 1716 HOH HOH . C 3 HOH A 123 2123 32 HOH HOH . C 3 HOH A 124 2124 1715 HOH HOH . C 3 HOH A 125 2125 1767 HOH HOH . C 3 HOH A 126 2126 1611 HOH HOH . C 3 HOH A 127 2127 1720 HOH HOH . C 3 HOH A 128 2128 9 HOH HOH . C 3 HOH A 129 2129 1724 HOH HOH . C 3 HOH A 130 2130 1740 HOH HOH . C 3 HOH A 131 2131 1736 HOH HOH . C 3 HOH A 132 2132 1641 HOH HOH . C 3 HOH A 133 2133 1710 HOH HOH . C 3 HOH A 134 2134 1729 HOH HOH . C 3 HOH A 135 2135 1684 HOH HOH . C 3 HOH A 136 2136 1801 HOH HOH . C 3 HOH A 137 2137 1726 HOH HOH . C 3 HOH A 138 2138 1744 HOH HOH . C 3 HOH A 139 2139 1734 HOH HOH . C 3 HOH A 140 2140 1730 HOH HOH . C 3 HOH A 141 2141 1723 HOH HOH . C 3 HOH A 142 2142 1656 HOH HOH . C 3 HOH A 143 2143 1695 HOH HOH . C 3 HOH A 144 2144 1722 HOH HOH . C 3 HOH A 145 2145 1746 HOH HOH . C 3 HOH A 146 2146 12 HOH HOH . C 3 HOH A 147 2147 1679 HOH HOH . C 3 HOH A 148 2148 1709 HOH HOH . C 3 HOH A 149 2149 1703 HOH HOH . C 3 HOH A 150 2150 1754 HOH HOH . C 3 HOH A 151 2151 1752 HOH HOH . C 3 HOH A 152 2152 35 HOH HOH . C 3 HOH A 153 2153 1795 HOH HOH . C 3 HOH A 154 2154 1745 HOH HOH . C 3 HOH A 155 2155 37 HOH HOH . C 3 HOH A 156 2156 1751 HOH HOH . C 3 HOH A 157 2157 1642 HOH HOH . C 3 HOH A 158 2158 1753 HOH HOH . C 3 HOH A 159 2159 1759 HOH HOH . C 3 HOH A 160 2160 1755 HOH HOH . C 3 HOH A 161 2161 1763 HOH HOH . C 3 HOH A 162 2162 1766 HOH HOH . C 3 HOH A 163 2163 1770 HOH HOH . C 3 HOH A 164 2164 14 HOH HOH . C 3 HOH A 165 2165 1794 HOH HOH . C 3 HOH A 166 2166 1742 HOH HOH . C 3 HOH A 167 2167 1731 HOH HOH . C 3 HOH A 168 2168 11 HOH HOH . C 3 HOH A 169 2169 1758 HOH HOH . C 3 HOH A 170 2170 1769 HOH HOH . C 3 HOH A 171 2171 1762 HOH HOH . C 3 HOH A 172 2172 1784 HOH HOH . C 3 HOH A 173 2173 1765 HOH HOH . C 3 HOH A 174 2174 1783 HOH HOH . C 3 HOH A 175 2175 18 HOH HOH . C 3 HOH A 176 2176 1743 HOH HOH . C 3 HOH A 177 2177 36 HOH HOH . C 3 HOH A 178 2178 1779 HOH HOH . C 3 HOH A 179 2179 1760 HOH HOH . C 3 HOH A 180 2180 1796 HOH HOH . C 3 HOH A 181 2181 1764 HOH HOH . C 3 HOH A 182 2182 1777 HOH HOH . C 3 HOH A 183 2183 1774 HOH HOH . C 3 HOH A 184 2184 1786 HOH HOH . C 3 HOH A 185 2185 1775 HOH HOH . C 3 HOH A 186 2186 1781 HOH HOH . C 3 HOH A 187 2187 1778 HOH HOH . C 3 HOH A 188 2188 1780 HOH HOH . C 3 HOH A 189 2189 1785 HOH HOH . C 3 HOH A 190 2190 1782 HOH HOH . C 3 HOH A 191 2191 5 HOH HOH . C 3 HOH A 192 2192 17 HOH HOH . C 3 HOH A 193 2193 28 HOH HOH . C 3 HOH A 194 2194 1776 HOH HOH . C 3 HOH A 195 2195 1768 HOH HOH . C 3 HOH A 196 2196 23 HOH HOH . C 3 HOH A 197 2197 1787 HOH HOH . C 3 HOH A 198 2198 1791 HOH HOH . C 3 HOH A 199 2199 1789 HOH HOH . C 3 HOH A 200 2200 1790 HOH HOH . C 3 HOH A 201 2201 1798 HOH HOH . C 3 HOH A 202 2202 1792 HOH HOH . C 3 HOH A 203 2203 1793 HOH HOH . C 3 HOH A 204 2204 34 HOH HOH . C 3 HOH A 205 2205 16 HOH HOH . C 3 HOH A 206 2206 15 HOH HOH . C 3 HOH A 207 2207 1797 HOH HOH . C 3 HOH A 208 2208 1799 HOH HOH . C 3 HOH A 209 2209 1800 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 ZPB . . . B 2 -16.086 17.14 26.261 0.64 33.91 ? N1 ZPB 1901 A 1 HETATM 2 N N3 ZPB . . . B 2 -19.098 13.365 25.963 0.64 33.52 ? N3 ZPB 1901 A 1 HETATM 3 C C4 ZPB . . . B 2 -16.808 16.568 27.165 0.64 34.53 ? C4 ZPB 1901 A 1 HETATM 4 C C5 ZPB . . . B 2 -18.562 14.946 27.744 0.64 34.26 ? C5 ZPB 1901 A 1 HETATM 5 C C6 ZPB . . . B 2 -18.624 13.484 27.342 0.64 33.76 ? C6 ZPB 1901 A 1 HETATM 6 C C7 ZPB . . . B 2 -18.247 14.086 25.019 0.64 33.38 ? C7 ZPB 1901 A 1 HETATM 7 C C8 ZPB . . . B 2 -18.253 15.551 25.392 0.64 32.55 ? C8 ZPB 1901 A 1 HETATM 8 C C10 ZPB . . . B 2 -21.374 12.68 26.317 0.64 31.51 ? C10 ZPB 1901 A 1 HETATM 9 C C13 ZPB . . . B 2 -23.673 12.19 27.017 0.64 30.11 ? C13 ZPB 1901 A 1 HETATM 10 C C1 ZPB . . . B 2 -16.527 19.513 26.191 0.64 34.27 ? C1 ZPB 1901 A 1 HETATM 11 C C11 ZPB . . . B 2 -21.72 13.325 27.502 0.64 29.57 ? C11 ZPB 1901 A 1 HETATM 12 C C12 ZPB . . . B 2 -22.999 12.906 27.947 0.64 32.07 ? C12 ZPB 1901 A 1 HETATM 13 C C2 ZPB . . . B 2 -15.487 18.457 26.48 0.64 33.51 ? C2 ZPB 1901 A 1 HETATM 14 C C3 ZPB . . . B 2 -14.238 18.62 25.643 0.64 32.6 ? C3 ZPB 1901 A 1 HETATM 15 C C9 ZPB . . . B 2 -20.199 12.743 25.511 0.64 31.21 ? C9 ZPB 1901 A 1 HETATM 16 N N2 ZPB . . . B 2 -17.801 15.733 26.772 0.64 34.47 ? N2 ZPB 1901 A 1 HETATM 17 O O1 ZPB . . . B 2 -16.615 16.837 28.354 0.64 32.3 ? O1 ZPB 1901 A 1 HETATM 18 O O2 ZPB . . . B 2 -20.248 12.277 24.38 0.64 31.02 ? O2 ZPB 1901 A 1 HETATM 19 S S1 ZPB . . . B 2 -22.666 11.689 25.742 0.64 33.36 ? S1 ZPB 1901 A 1 # _model_server_stats.io_time_ms 32 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 19 #