data_7FX5 # _model_server_result.job_id A4m1nFkTWd-L06bLDezxrA _model_server_result.datetime_utc '2024-11-14 19:30:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7fx5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 7FX5 # _exptl.entry_id 7FX5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 451.444 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '5-{[(3M)-3-(3-cyclopropyl-1,2,4-oxadiazol-5-yl)-6,6-difluoro-4,5,6,7-tetrahydro-1-benzothiophen-2-yl]carbamoyl}-3,6-dihydro-2H-pyran-4-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7FX5 _cell.length_a 32.519 _cell.length_b 53.745 _cell.length_c 74.52 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7FX5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H19 F2 N3 O5 S' _chem_comp.formula_weight 451.444 _chem_comp.id Q4X _chem_comp.mon_nstd_flag . _chem_comp.name '5-{[(3M)-3-(3-cyclopropyl-1,2,4-oxadiazol-5-yl)-6,6-difluoro-4,5,6,7-tetrahydro-1-benzothiophen-2-yl]carbamoyl}-3,6-dihydro-2H-pyran-4-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C10 C11 Q4X doub 290 n y C10 N12 Q4X sing 291 n n C11 C13 Q4X sing 292 n n N12 C21 Q4X sing 293 n n C13 N14 Q4X doub 294 n y C13 O17 Q4X sing 295 n y N14 C15 Q4X sing 296 n y C15 N16 Q4X doub 297 n y C15 C18 Q4X sing 298 n n N16 O17 Q4X sing 299 n y C18 C19 Q4X sing 300 n n C18 C20 Q4X sing 301 n n C19 C20 Q4X sing 302 n n C21 C22 Q4X sing 303 n n C21 O23 Q4X doub 304 n n C22 C24 Q4X doub 305 n n C22 C28 Q4X sing 306 n n C24 C25 Q4X sing 307 n n C24 C29 Q4X sing 308 n n C25 C26 Q4X sing 309 n n C26 O27 Q4X sing 310 n n O27 C28 Q4X sing 311 n n C29 O30 Q4X doub 312 n n C29 O31 Q4X sing 313 n n C01 H1 Q4X sing 314 n n C01 H2 Q4X sing 315 n n C06 H17 Q4X sing 316 n n C06 H18 Q4X sing 317 n n C18 H39 Q4X sing 318 n n C19 H40 Q4X sing 319 n n C19 H41 Q4X sing 320 n n C20 H42 Q4X sing 321 n n C20 H43 Q4X sing 322 n n C25 H44 Q4X sing 323 n n C25 H45 Q4X sing 324 n n C26 H47 Q4X sing 325 n n C26 H46 Q4X sing 326 n n C28 H49 Q4X sing 327 n n C28 H48 Q4X sing 328 n n C03 H23 Q4X sing 329 n n C03 H24 Q4X sing 330 n n N12 H38 Q4X sing 331 n n O31 H50 Q4X sing 332 n n C10 S09 Q4X sing 333 n y S09 C04 Q4X sing 334 n y C04 C05 Q4X doub 335 n y C05 C11 Q4X sing 336 n y C05 C06 Q4X sing 337 n n C04 C03 Q4X sing 338 n n C03 C02 Q4X sing 339 n n C06 C01 Q4X sing 340 n n C01 C02 Q4X sing 341 n n C02 F08 Q4X sing 342 n n C02 F07 Q4X sing 343 n n # _atom_sites.entry_id 7FX5 _atom_sites.fract_transf_matrix[1][1] 0.030751 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018606 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013419 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 201 1 SO4 SO4 . C 2 SO4 A 1 202 2 SO4 SO4 . D 3 FMT A 1 203 1 FMT FMT . E 4 Q4X A 1 204 1 Q4X L0R . F 5 DMS A 1 205 1 DMS DMS . G 6 CL A 1 206 1 CL CL . H 7 HOH A 1 301 129 HOH HOH . H 7 HOH A 2 302 96 HOH HOH . H 7 HOH A 3 303 91 HOH HOH . H 7 HOH A 4 304 125 HOH HOH . H 7 HOH A 5 305 52 HOH HOH . H 7 HOH A 6 306 101 HOH HOH . H 7 HOH A 7 307 45 HOH HOH . H 7 HOH A 8 308 44 HOH HOH . H 7 HOH A 9 309 51 HOH HOH . H 7 HOH A 10 310 30 HOH HOH . H 7 HOH A 11 311 37 HOH HOH . H 7 HOH A 12 312 39 HOH HOH . H 7 HOH A 13 313 77 HOH HOH . H 7 HOH A 14 314 53 HOH HOH . H 7 HOH A 15 315 99 HOH HOH . H 7 HOH A 16 316 107 HOH HOH . H 7 HOH A 17 317 57 HOH HOH . H 7 HOH A 18 318 31 HOH HOH . H 7 HOH A 19 319 33 HOH HOH . H 7 HOH A 20 320 109 HOH HOH . H 7 HOH A 21 321 83 HOH HOH . H 7 HOH A 22 322 36 HOH HOH . H 7 HOH A 23 323 105 HOH HOH . H 7 HOH A 24 324 9 HOH HOH . H 7 HOH A 25 325 23 HOH HOH . H 7 HOH A 26 326 55 HOH HOH . H 7 HOH A 27 327 80 HOH HOH . H 7 HOH A 28 328 90 HOH HOH . H 7 HOH A 29 329 19 HOH HOH . H 7 HOH A 30 330 81 HOH HOH . H 7 HOH A 31 331 8 HOH HOH . H 7 HOH A 32 332 34 HOH HOH . H 7 HOH A 33 333 21 HOH HOH . H 7 HOH A 34 334 87 HOH HOH . H 7 HOH A 35 335 13 HOH HOH . H 7 HOH A 36 336 120 HOH HOH . H 7 HOH A 37 337 6 HOH HOH . H 7 HOH A 38 338 98 HOH HOH . H 7 HOH A 39 339 71 HOH HOH . H 7 HOH A 40 340 4 HOH HOH . H 7 HOH A 41 341 24 HOH HOH . H 7 HOH A 42 342 1 HOH HOH . H 7 HOH A 43 343 22 HOH HOH . H 7 HOH A 44 344 59 HOH HOH . H 7 HOH A 45 345 79 HOH HOH . H 7 HOH A 46 346 70 HOH HOH . H 7 HOH A 47 347 67 HOH HOH . H 7 HOH A 48 348 117 HOH HOH . H 7 HOH A 49 349 38 HOH HOH . H 7 HOH A 50 350 62 HOH HOH . H 7 HOH A 51 351 15 HOH HOH . H 7 HOH A 52 352 28 HOH HOH . H 7 HOH A 53 353 124 HOH HOH . H 7 HOH A 54 354 11 HOH HOH . H 7 HOH A 55 355 20 HOH HOH . H 7 HOH A 56 356 5 HOH HOH . H 7 HOH A 57 357 78 HOH HOH . H 7 HOH A 58 358 123 HOH HOH . H 7 HOH A 59 359 32 HOH HOH . H 7 HOH A 60 360 111 HOH HOH . H 7 HOH A 61 361 3 HOH HOH . H 7 HOH A 62 362 131 HOH HOH . H 7 HOH A 63 363 69 HOH HOH . H 7 HOH A 64 364 17 HOH HOH . H 7 HOH A 65 365 102 HOH HOH . H 7 HOH A 66 366 35 HOH HOH . H 7 HOH A 67 367 43 HOH HOH . H 7 HOH A 68 368 18 HOH HOH . H 7 HOH A 69 369 50 HOH HOH . H 7 HOH A 70 370 115 HOH HOH . H 7 HOH A 71 371 2 HOH HOH . H 7 HOH A 72 372 108 HOH HOH . H 7 HOH A 73 373 42 HOH HOH . H 7 HOH A 74 374 54 HOH HOH . H 7 HOH A 75 375 113 HOH HOH . H 7 HOH A 76 376 94 HOH HOH . H 7 HOH A 77 377 133 HOH HOH . H 7 HOH A 78 378 74 HOH HOH . H 7 HOH A 79 379 76 HOH HOH . H 7 HOH A 80 380 27 HOH HOH . H 7 HOH A 81 381 85 HOH HOH . H 7 HOH A 82 382 65 HOH HOH . H 7 HOH A 83 383 46 HOH HOH . H 7 HOH A 84 384 118 HOH HOH . H 7 HOH A 85 385 40 HOH HOH . H 7 HOH A 86 386 75 HOH HOH . H 7 HOH A 87 387 47 HOH HOH . H 7 HOH A 88 388 64 HOH HOH . H 7 HOH A 89 389 84 HOH HOH . H 7 HOH A 90 390 82 HOH HOH . H 7 HOH A 91 391 61 HOH HOH . H 7 HOH A 92 392 116 HOH HOH . H 7 HOH A 93 393 66 HOH HOH . H 7 HOH A 94 394 72 HOH HOH . H 7 HOH A 95 395 112 HOH HOH . H 7 HOH A 96 396 60 HOH HOH . H 7 HOH A 97 397 106 HOH HOH . H 7 HOH A 98 398 126 HOH HOH . H 7 HOH A 99 399 132 HOH HOH . H 7 HOH A 100 400 58 HOH HOH . H 7 HOH A 101 401 135 HOH HOH . H 7 HOH A 102 402 136 HOH HOH . H 7 HOH A 103 403 12 HOH HOH . H 7 HOH A 104 404 114 HOH HOH . H 7 HOH A 105 405 110 HOH HOH . H 7 HOH A 106 406 88 HOH HOH . H 7 HOH A 107 407 49 HOH HOH . H 7 HOH A 108 408 130 HOH HOH . H 7 HOH A 109 409 128 HOH HOH . H 7 HOH A 110 410 73 HOH HOH . H 7 HOH A 111 411 25 HOH HOH . H 7 HOH A 112 412 134 HOH HOH . H 7 HOH A 113 413 41 HOH HOH . H 7 HOH A 114 414 104 HOH HOH . H 7 HOH A 115 415 89 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 Q4X . . . E 4 -1.577 5.327 21.679 1 25.44 ? C01 Q4X 204 A 1 HETATM 2 C C02 Q4X . . . E 4 -1.864 4.454 20.543 1 28.84 ? C02 Q4X 204 A 1 HETATM 3 C C04 Q4X . . . E 4 0.367 4.9 19.457 1 23.47 ? C04 Q4X 204 A 1 HETATM 4 C C05 Q4X . . . E 4 0.721 5.317 20.893 1 23.49 ? C05 Q4X 204 A 1 HETATM 5 C C06 Q4X . . . E 4 -0.265 5.422 22.018 1 26.94 ? C06 Q4X 204 A 1 HETATM 6 C C10 Q4X . . . E 4 2.683 5.45 19.567 1 17.75 ? C10 Q4X 204 A 1 HETATM 7 C C11 Q4X . . . E 4 2.197 5.698 20.901 1 20.43 ? C11 Q4X 204 A 1 HETATM 8 C C13 Q4X . . . E 4 3.018 6.142 22.042 1 24.02 ? C13 Q4X 204 A 1 HETATM 9 C C15 Q4X . . . E 4 4.668 6.877 23.23 1 22.21 ? C15 Q4X 204 A 1 HETATM 10 C C18 Q4X . . . E 4 6.018 7.372 23.602 1 23.46 ? C18 Q4X 204 A 1 HETATM 11 C C19 Q4X . . . E 4 7.227 6.723 23.012 1 24.95 ? C19 Q4X 204 A 1 HETATM 12 C C20 Q4X . . . E 4 6.785 8.101 22.603 1 24.85 ? C20 Q4X 204 A 1 HETATM 13 C C21 Q4X . . . E 4 4.58 5.654 18.063 1 17.32 ? C21 Q4X 204 A 1 HETATM 14 C C22 Q4X . . . E 4 5.939 6.195 18.038 1 18.31 ? C22 Q4X 204 A 1 HETATM 15 C C24 Q4X . . . E 4 6.709 6.145 16.801 1 17.67 ? C24 Q4X 204 A 1 HETATM 16 C C25 Q4X . . . E 4 7.999 6.683 16.74 1 19.32 ? C25 Q4X 204 A 1 HETATM 17 C C26 Q4X . . . E 4 8.633 6.973 18.139 1 24.76 ? C26 Q4X 204 A 1 HETATM 18 C C28 Q4X . . . E 4 6.621 6.728 19.218 1 18.88 ? C28 Q4X 204 A 1 HETATM 19 C C03 Q4X . . . E 4 -1.075 4.55 19.311 1 26.16 ? C03 Q4X 204 A 1 HETATM 20 F F07 Q4X . . . E 4 -1.676 3.239 21.11 1 30.64 ? F07 Q4X 204 A 1 HETATM 21 F F08 Q4X . . . E 4 -3.215 4.326 20.41 1 38.64 ? F08 Q4X 204 A 1 HETATM 22 S S09 Q4X . . . E 4 1.569 4.897 18.457 1 20.65 ? S09 Q4X 204 A 1 HETATM 23 N N12 Q4X . . . E 4 3.986 5.788 19.304 1 17.85 ? N12 Q4X 204 A 1 HETATM 24 N N14 Q4X . . . E 4 4.295 6.535 21.956 1 22.08 ? N14 Q4X 204 A 1 HETATM 25 N N16 Q4X . . . E 4 3.634 6.647 24.038 1 26.44 ? N16 Q4X 204 A 1 HETATM 26 O O17 Q4X . . . E 4 2.548 6.173 23.326 1 25.51 ? O17 Q4X 204 A 1 HETATM 27 O O23 Q4X . . . E 4 3.978 5.109 17.104 1 18.68 ? O23 Q4X 204 A 1 HETATM 28 O O27 Q4X . . . E 4 7.855 7.226 19.083 1 26.25 ? O27 Q4X 204 A 1 HETATM 29 C C29 Q4X . . . E 4 6.131 5.717 15.569 1 15.55 ? C29 Q4X 204 A 1 HETATM 30 O O30 Q4X . . . E 4 6.259 4.563 15.103 1 16.05 ? O30 Q4X 204 A 1 HETATM 31 O O31 Q4X . . . E 4 5.489 6.675 14.906 1 19.23 -1 O31 Q4X 204 A 1 HETATM 32 H H1 Q4X . . . E 4 -2.079 5.009 22.451 1 24.16 ? H1 Q4X 204 A 1 HETATM 33 H H2 Q4X . . . E 4 -1.882 6.22 21.466 1 25.43 ? H2 Q4X 204 A 1 HETATM 34 H H17 Q4X . . . E 4 -0.074 4.714 22.655 1 23.82 ? H17 Q4X 204 A 1 HETATM 35 H H18 Q4X . . . E 4 -0.125 6.275 22.465 1 26.3 ? H18 Q4X 204 A 1 HETATM 36 H H39 Q4X . . . E 4 6.141 7.691 24.508 1 23.75 ? H39 Q4X 204 A 1 HETATM 37 H H40 Q4X . . . E 4 7.056 6.014 22.371 1 25.19 ? H40 Q4X 204 A 1 HETATM 38 H H41 Q4X . . . E 4 8.008 6.681 23.589 1 23.86 ? H41 Q4X 204 A 1 HETATM 39 H H42 Q4X . . . E 4 7.335 8.824 22.94 1 21.89 ? H42 Q4X 204 A 1 HETATM 40 H H43 Q4X . . . E 4 6.384 8.171 21.723 1 23.63 ? H43 Q4X 204 A 1 HETATM 41 H H44 Q4X . . . E 4 7.965 7.515 16.238 1 19.66 ? H44 Q4X 204 A 1 HETATM 42 H H45 Q4X . . . E 4 8.576 6.057 16.268 1 19.68 ? H45 Q4X 204 A 1 HETATM 43 H H47 Q4X . . . E 4 9.262 7.711 18.049 1 23.44 ? H47 Q4X 204 A 1 HETATM 44 H H46 Q4X . . . E 4 9.121 6.18 18.408 1 23.09 ? H46 Q4X 204 A 1 HETATM 45 H H49 Q4X . . . E 4 6.661 6.024 19.887 1 19.2 ? H49 Q4X 204 A 1 HETATM 46 H H48 Q4X . . . E 4 6.072 7.448 19.57 1 19.76 ? H48 Q4X 204 A 1 HETATM 47 H H23 Q4X . . . E 4 -1.125 3.696 18.849 1 24.32 ? H23 Q4X 204 A 1 HETATM 48 H H24 Q4X . . . E 4 -1.482 5.236 18.761 1 24.99 ? H24 Q4X 204 A 1 HETATM 49 H H38 Q4X . . . E 4 4.441 6.218 19.946 1 18.92 ? H38 Q4X 204 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 49 #