data_7FX7
#
_model_server_result.job_id            mDl-I3vNS9DQbYeXACFjRg 
_model_server_result.datetime_utc      '2024-11-27 17:33:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7fx7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":201}' 
#
_entry.id    7FX7 
#
_exptl.entry_id    7FX7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              410.513 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-({[4-(benzyloxy)-1H-indazol-3-yl]methyl}sulfanyl)-5-(methylsulfanyl)pyrimidin-4-ol 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7FX7 
_cell.length_a            32.224 
_cell.length_b            52.943 
_cell.length_c            72.326 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7FX7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 2 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C20 H18 N4 O2 S2' 
_chem_comp.formula_weight    410.513 
_chem_comp.id                QLL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-({[4-(benzyloxy)-1H-indazol-3-yl]methyl}sulfanyl)-5-(methylsulfanyl)pyrimidin-4-ol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N2 C4 QLL doub 295 n y 
C3 C4 QLL sing 296 n y 
N1 C5 QLL doub 297 n y 
N1 C6 QLL sing 298 n y 
N2 N7 QLL sing 299 n y 
C5 C8 QLL sing 300 n y 
C6 N9 QLL doub 301 n y 
C3 C10 QLL doub 302 n y 
N7 C10 QLL sing 303 n y 
C3 C11 QLL sing 304 n y 
C6 S12 QLL sing 305 n n 
C8 C13 QLL doub 306 n y 
N9 C13 QLL sing 307 n y 
C4 C14 QLL sing 308 n n 
S12 C14 QLL sing 309 n n 
C11 O15 QLL sing 310 n n 
C8 S16 QLL sing 311 n n 
C5 O17 QLL sing 312 n n 
O15 C18 QLL sing 313 n n 
C18 C19 QLL sing 314 n n 
C10 C21 QLL sing 315 n y 
C20 C21 QLL doub 316 n y 
C11 C22 QLL doub 317 n y 
C20 C22 QLL sing 318 n y 
S16 C23 QLL sing 319 n n 
C19 C24 QLL doub 320 n y 
C19 C25 QLL sing 321 n y 
C25 C26 QLL doub 322 n y 
C24 C27 QLL sing 323 n y 
C26 C28 QLL sing 324 n y 
C27 C28 QLL doub 325 n y 
C13 H30 QLL sing 326 n n 
C18 H35 QLL sing 327 n n 
C18 H34 QLL sing 328 n n 
C20 H36 QLL sing 329 n n 
C21 H37 QLL sing 330 n n 
C22 H38 QLL sing 331 n n 
C23 H39 QLL sing 332 n n 
C23 H41 QLL sing 333 n n 
C23 H40 QLL sing 334 n n 
C24 H42 QLL sing 335 n n 
C25 H43 QLL sing 336 n n 
C26 H44 QLL sing 337 n n 
C27 H45 QLL sing 338 n n 
C28 H46 QLL sing 339 n n 
N7 H29 QLL sing 340 n n 
C14 H32 QLL sing 341 n n 
C14 H31 QLL sing 342 n n 
O17 H33 QLL sing 343 n n 
#
_atom_sites.entry_id                     7FX7 
_atom_sites.fract_transf_matrix[1][1]    0.031033 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018888 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013826 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 QLL A 1 201 1 QLL L0R . 
C 3 DMS A 1 202 3092 DMS DMS . 
D 4 EDO A 1 203 3318 EDO EDO . 
E 5 HOH A 1 301 90 HOH HOH . 
E 5 HOH A 2 302 154 HOH HOH . 
E 5 HOH A 3 303 52 HOH HOH . 
E 5 HOH A 4 304 118 HOH HOH . 
E 5 HOH A 5 305 21 HOH HOH . 
E 5 HOH A 6 306 165 HOH HOH . 
E 5 HOH A 7 307 60 HOH HOH . 
E 5 HOH A 8 308 158 HOH HOH . 
E 5 HOH A 9 309 134 HOH HOH . 
E 5 HOH A 10 310 94 HOH HOH . 
E 5 HOH A 11 311 28 HOH HOH . 
E 5 HOH A 12 312 187 HOH HOH . 
E 5 HOH A 13 313 91 HOH HOH . 
E 5 HOH A 14 314 70 HOH HOH . 
E 5 HOH A 15 315 120 HOH HOH . 
E 5 HOH A 16 316 157 HOH HOH . 
E 5 HOH A 17 317 36 HOH HOH . 
E 5 HOH A 18 318 55 HOH HOH . 
E 5 HOH A 19 319 84 HOH HOH . 
E 5 HOH A 20 320 127 HOH HOH . 
E 5 HOH A 21 321 166 HOH HOH . 
E 5 HOH A 22 322 92 HOH HOH . 
E 5 HOH A 23 323 132 HOH HOH . 
E 5 HOH A 24 324 71 HOH HOH . 
E 5 HOH A 25 325 15 HOH HOH . 
E 5 HOH A 26 326 30 HOH HOH . 
E 5 HOH A 27 327 182 HOH HOH . 
E 5 HOH A 28 328 89 HOH HOH . 
E 5 HOH A 29 329 76 HOH HOH . 
E 5 HOH A 30 330 72 HOH HOH . 
E 5 HOH A 31 331 43 HOH HOH . 
E 5 HOH A 32 332 171 HOH HOH . 
E 5 HOH A 33 333 68 HOH HOH . 
E 5 HOH A 34 334 99 HOH HOH . 
E 5 HOH A 35 335 77 HOH HOH . 
E 5 HOH A 36 336 37 HOH HOH . 
E 5 HOH A 37 337 116 HOH HOH . 
E 5 HOH A 38 338 173 HOH HOH . 
E 5 HOH A 39 339 146 HOH HOH . 
E 5 HOH A 40 340 193 HOH HOH . 
E 5 HOH A 41 341 121 HOH HOH . 
E 5 HOH A 42 342 83 HOH HOH . 
E 5 HOH A 43 343 41 HOH HOH . 
E 5 HOH A 44 344 39 HOH HOH . 
E 5 HOH A 45 345 163 HOH HOH . 
E 5 HOH A 46 346 1 HOH HOH . 
E 5 HOH A 47 347 140 HOH HOH . 
E 5 HOH A 48 348 124 HOH HOH . 
E 5 HOH A 49 349 192 HOH HOH . 
E 5 HOH A 50 350 147 HOH HOH . 
E 5 HOH A 51 351 133 HOH HOH . 
E 5 HOH A 52 352 81 HOH HOH . 
E 5 HOH A 53 353 130 HOH HOH . 
E 5 HOH A 54 354 61 HOH HOH . 
E 5 HOH A 55 355 123 HOH HOH . 
E 5 HOH A 56 356 12 HOH HOH . 
E 5 HOH A 57 357 82 HOH HOH . 
E 5 HOH A 58 358 62 HOH HOH . 
E 5 HOH A 59 359 59 HOH HOH . 
E 5 HOH A 60 360 19 HOH HOH . 
E 5 HOH A 61 361 22 HOH HOH . 
E 5 HOH A 62 362 3 HOH HOH . 
E 5 HOH A 63 363 38 HOH HOH . 
E 5 HOH A 64 364 31 HOH HOH . 
E 5 HOH A 65 365 42 HOH HOH . 
E 5 HOH A 66 366 29 HOH HOH . 
E 5 HOH A 67 367 6 HOH HOH . 
E 5 HOH A 68 368 88 HOH HOH . 
E 5 HOH A 69 369 49 HOH HOH . 
E 5 HOH A 70 370 8 HOH HOH . 
E 5 HOH A 71 371 17 HOH HOH . 
E 5 HOH A 72 372 10 HOH HOH . 
E 5 HOH A 73 373 56 HOH HOH . 
E 5 HOH A 74 374 53 HOH HOH . 
E 5 HOH A 75 375 11 HOH HOH . 
E 5 HOH A 76 376 97 HOH HOH . 
E 5 HOH A 77 377 46 HOH HOH . 
E 5 HOH A 78 378 7 HOH HOH . 
E 5 HOH A 79 379 105 HOH HOH . 
E 5 HOH A 80 380 119 HOH HOH . 
E 5 HOH A 81 381 103 HOH HOH . 
E 5 HOH A 82 382 128 HOH HOH . 
E 5 HOH A 83 383 63 HOH HOH . 
E 5 HOH A 84 384 102 HOH HOH . 
E 5 HOH A 85 385 180 HOH HOH . 
E 5 HOH A 86 386 13 HOH HOH . 
E 5 HOH A 87 387 4 HOH HOH . 
E 5 HOH A 88 388 32 HOH HOH . 
E 5 HOH A 89 389 176 HOH HOH . 
E 5 HOH A 90 390 93 HOH HOH . 
E 5 HOH A 91 391 85 HOH HOH . 
E 5 HOH A 92 392 50 HOH HOH . 
E 5 HOH A 93 393 16 HOH HOH . 
E 5 HOH A 94 394 2 HOH HOH . 
E 5 HOH A 95 395 129 HOH HOH . 
E 5 HOH A 96 396 18 HOH HOH . 
E 5 HOH A 97 397 110 HOH HOH . 
E 5 HOH A 98 398 139 HOH HOH . 
E 5 HOH A 99 399 181 HOH HOH . 
E 5 HOH A 100 400 47 HOH HOH . 
E 5 HOH A 101 401 112 HOH HOH . 
E 5 HOH A 102 402 75 HOH HOH . 
E 5 HOH A 103 403 27 HOH HOH . 
E 5 HOH A 104 404 35 HOH HOH . 
E 5 HOH A 105 405 153 HOH HOH . 
E 5 HOH A 106 406 66 HOH HOH . 
E 5 HOH A 107 407 40 HOH HOH . 
E 5 HOH A 108 408 80 HOH HOH . 
E 5 HOH A 109 409 78 HOH HOH . 
E 5 HOH A 110 410 184 HOH HOH . 
E 5 HOH A 111 411 150 HOH HOH . 
E 5 HOH A 112 412 5 HOH HOH . 
E 5 HOH A 113 413 179 HOH HOH . 
E 5 HOH A 114 414 125 HOH HOH . 
E 5 HOH A 115 415 117 HOH HOH . 
E 5 HOH A 116 416 69 HOH HOH . 
E 5 HOH A 117 417 64 HOH HOH . 
E 5 HOH A 118 418 57 HOH HOH . 
E 5 HOH A 119 419 74 HOH HOH . 
E 5 HOH A 120 420 51 HOH HOH . 
E 5 HOH A 121 421 148 HOH HOH . 
E 5 HOH A 122 422 58 HOH HOH . 
E 5 HOH A 123 423 33 HOH HOH . 
E 5 HOH A 124 424 115 HOH HOH . 
E 5 HOH A 125 425 44 HOH HOH . 
E 5 HOH A 126 426 107 HOH HOH . 
E 5 HOH A 127 427 25 HOH HOH . 
E 5 HOH A 128 428 100 HOH HOH . 
E 5 HOH A 129 429 48 HOH HOH . 
E 5 HOH A 130 430 96 HOH HOH . 
E 5 HOH A 131 431 114 HOH HOH . 
E 5 HOH A 132 432 9 HOH HOH . 
E 5 HOH A 133 433 122 HOH HOH . 
E 5 HOH A 134 434 111 HOH HOH . 
E 5 HOH A 135 435 86 HOH HOH . 
E 5 HOH A 136 436 95 HOH HOH . 
E 5 HOH A 137 437 138 HOH HOH . 
E 5 HOH A 138 438 108 HOH HOH . 
E 5 HOH A 139 439 168 HOH HOH . 
E 5 HOH A 140 440 101 HOH HOH . 
E 5 HOH A 141 441 149 HOH HOH . 
E 5 HOH A 142 442 143 HOH HOH . 
E 5 HOH A 143 443 54 HOH HOH . 
E 5 HOH A 144 444 20 HOH HOH . 
E 5 HOH A 145 445 104 HOH HOH . 
E 5 HOH A 146 446 145 HOH HOH . 
E 5 HOH A 147 447 131 HOH HOH . 
E 5 HOH A 148 448 65 HOH HOH . 
E 5 HOH A 149 449 67 HOH HOH . 
E 5 HOH A 150 450 188 HOH HOH . 
E 5 HOH A 151 451 142 HOH HOH . 
E 5 HOH A 152 452 167 HOH HOH . 
E 5 HOH A 153 453 73 HOH HOH . 
E 5 HOH A 154 454 79 HOH HOH . 
E 5 HOH A 155 455 34 HOH HOH . 
E 5 HOH A 156 456 169 HOH HOH . 
E 5 HOH A 157 457 151 HOH HOH . 
E 5 HOH A 158 458 160 HOH HOH . 
E 5 HOH A 159 459 196 HOH HOH . 
E 5 HOH A 160 460 155 HOH HOH . 
E 5 HOH A 161 461 24 HOH HOH . 
E 5 HOH A 162 462 170 HOH HOH . 
E 5 HOH A 163 463 109 HOH HOH . 
E 5 HOH A 164 464 152 HOH HOH . 
E 5 HOH A 165 465 186 HOH HOH . 
E 5 HOH A 166 466 162 HOH HOH . 
E 5 HOH A 167 467 14 HOH HOH . 
E 5 HOH A 168 468 156 HOH HOH . 
E 5 HOH A 169 469 98 HOH HOH . 
E 5 HOH A 170 470 23 HOH HOH . 
E 5 HOH A 171 471 183 HOH HOH . 
E 5 HOH A 172 472 106 HOH HOH . 
E 5 HOH A 173 473 136 HOH HOH . 
E 5 HOH A 174 474 190 HOH HOH . 
E 5 HOH A 175 475 159 HOH HOH . 
E 5 HOH A 176 476 175 HOH HOH . 
E 5 HOH A 177 477 174 HOH HOH . 
E 5 HOH A 178 478 178 HOH HOH . 
E 5 HOH A 179 479 194 HOH HOH . 
E 5 HOH A 180 480 26 HOH HOH . 
E 5 HOH A 181 481 172 HOH HOH . 
E 5 HOH A 182 482 191 HOH HOH . 
E 5 HOH A 183 483 141 HOH HOH . 
E 5 HOH A 184 484 144 HOH HOH . 
E 5 HOH A 185 485 113 HOH HOH . 
E 5 HOH A 186 486 164 HOH HOH . 
E 5 HOH A 187 487 87 HOH HOH . 
E 5 HOH A 188 488 126 HOH HOH . 
E 5 HOH A 189 489 135 HOH HOH . 
E 5 HOH A 190 490 195 HOH HOH . 
E 5 HOH A 191 491 137 HOH HOH . 
E 5 HOH A 192 492 45 HOH HOH . 
E 5 HOH A 193 493 177 HOH HOH . 
E 5 HOH A 194 494 161 HOH HOH . 
E 5 HOH A 195 495 185 HOH HOH . 
E 5 HOH A 196 496 189 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 QLL . . . B 2 20.901 -3.584 -22.851 1 11.49 ? C10 QLL 201 A 1 
HETATM 2 C C11 QLL . . . B 2 18.897 -3.897 -24.122 1 11.9 ? C11 QLL 201 A 1 
HETATM 3 C C13 QLL . . . B 2 13.776 -4.837 -19.843 1 20.13 ? C13 QLL 201 A 1 
HETATM 4 C C18 QLL . . . B 2 16.876 -4.224 -25.319 1 12.69 ? C18 QLL 201 A 1 
HETATM 5 C C19 QLL . . . B 2 15.413 -4.321 -25.099 1 12.3 ? C19 QLL 201 A 1 
HETATM 6 C C20 QLL . . . B 2 21.022 -3.485 -25.162 1 14.52 ? C20 QLL 201 A 1 
HETATM 7 C C21 QLL . . . B 2 21.692 -3.436 -23.992 1 14.54 ? C21 QLL 201 A 1 
HETATM 8 C C22 QLL . . . B 2 19.647 -3.716 -25.248 1 13.59 ? C22 QLL 201 A 1 
HETATM 9 C C23 QLL . . . B 2 10.938 -5.177 -19.716 1 43.48 ? C23 QLL 201 A 1 
HETATM 10 C C24 QLL . . . B 2 14.573 -4.5 -26.187 1 13.72 ? C24 QLL 201 A 1 
HETATM 11 C C25 QLL . . . B 2 14.813 -4.185 -23.86 1 14.13 ? C25 QLL 201 A 1 
HETATM 12 C C26 QLL . . . B 2 13.429 -4.282 -23.73 1 14.73 ? C26 QLL 201 A 1 
HETATM 13 C C27 QLL . . . B 2 13.212 -4.606 -26.054 1 16.22 ? C27 QLL 201 A 1 
HETATM 14 C C28 QLL . . . B 2 12.609 -4.463 -24.817 1 13.78 ? C28 QLL 201 A 1 
HETATM 15 N N1 QLL . . . B 2 15.715 -6.328 -18.59 1 21.5 ? N1 QLL 201 A 1 
HETATM 16 N N2 QLL . . . B 2 20.175 -3.753 -20.764 1 14.38 ? N2 QLL 201 A 1 
HETATM 17 C C3 QLL . . . B 2 19.563 -3.808 -22.881 1 11.97 ? C3 QLL 201 A 1 
HETATM 18 C C4 QLL . . . B 2 19.129 -3.899 -21.577 1 12.69 ? C4 QLL 201 A 1 
HETATM 19 C C5 QLL . . . B 2 14.453 -6.508 -18.304 1 19.73 ? C5 QLL 201 A 1 
HETATM 20 C C6 QLL . . . B 2 16.027 -5.411 -19.498 1 16.2 ? C6 QLL 201 A 1 
HETATM 21 N N7 QLL . . . B 2 21.29 -3.574 -21.537 1 14.83 ? N7 QLL 201 A 1 
HETATM 22 C C8 QLL . . . B 2 13.468 -5.807 -18.918 1 22.52 ? C8 QLL 201 A 1 
HETATM 23 N N9 QLL . . . B 2 15.072 -4.647 -20.1 1 18.17 ? N9 QLL 201 A 1 
HETATM 24 S S12 QLL . . . B 2 17.696 -5.222 -19.902 1 22.92 ? S12 QLL 201 A 1 
HETATM 25 C C14 QLL . . . B 2 17.761 -4.104 -21.123 1 15.06 ? C14 QLL 201 A 1 
HETATM 26 O O15 QLL . . . B 2 17.554 -4.099 -24.108 1 12.84 ? O15 QLL 201 A 1 
HETATM 27 S S16 QLL . . . B 2 11.806 -6.185 -18.535 1 27.44 ? S16 QLL 201 A 1 
HETATM 28 O O17 QLL . . . B 2 14.128 -7.395 -17.329 1 18.7 ? O17 QLL 201 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           312 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           28 
#