data_7FYD
#
_model_server_result.job_id            DJumIEDoMAN7xjEk6dPqMg 
_model_server_result.datetime_utc      '2024-11-18 06:37:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7fyd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":201}' 
#
_entry.id    7FYD 
#
_exptl.entry_id    7FYD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7FYD 
_cell.length_a            61.876 
_cell.length_b            61.876 
_cell.length_c            74.547 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7FYD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   disulf 
_struct_conn.details                        ? 
_struct_conn.id                             disulf1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             123 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              120 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            A 
_struct_conn.ptnr2_label_atom_id            SG 
_struct_conn.ptnr2_label_comp_id            CYS 
_struct_conn.ptnr2_label_seq_id             130 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             CYS 
_struct_conn.ptnr2_auth_seq_id              127 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        B 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        B 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.078 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 83 n n 
S C1 DMS sing 84 n n 
S C2 DMS sing 85 n n 
C1 H11 DMS sing 86 n n 
C1 H12 DMS sing 87 n n 
C1 H13 DMS sing 88 n n 
C2 H21 DMS sing 89 n n 
C2 H22 DMS sing 90 n n 
C2 H23 DMS sing 91 n n 
#
_atom_sites.entry_id                     7FYD 
_atom_sites.fract_transf_matrix[1][1]    0.016161 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016161 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013414 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 DMS A 1 201 1 DMS DMS . 
C 3 SO4 A 1 202 1 SO4 SO4 . 
D 3 SO4 A 1 203 2 SO4 SO4 . 
E 4 VLQ A 1 204 1 VLQ UNL . 
F 5 HOH A 1 301 9 HOH HOH . 
F 5 HOH A 2 302 84 HOH HOH . 
F 5 HOH A 3 303 92 HOH HOH . 
F 5 HOH A 4 304 24 HOH HOH . 
F 5 HOH A 5 305 63 HOH HOH . 
F 5 HOH A 6 306 11 HOH HOH . 
F 5 HOH A 7 307 34 HOH HOH . 
F 5 HOH A 8 308 33 HOH HOH . 
F 5 HOH A 9 309 76 HOH HOH . 
F 5 HOH A 10 310 5 HOH HOH . 
F 5 HOH A 11 311 66 HOH HOH . 
F 5 HOH A 12 312 55 HOH HOH . 
F 5 HOH A 13 313 60 HOH HOH . 
F 5 HOH A 14 314 3 HOH HOH . 
F 5 HOH A 15 315 13 HOH HOH . 
F 5 HOH A 16 316 56 HOH HOH . 
F 5 HOH A 17 317 31 HOH HOH . 
F 5 HOH A 18 318 36 HOH HOH . 
F 5 HOH A 19 319 7 HOH HOH . 
F 5 HOH A 20 320 53 HOH HOH . 
F 5 HOH A 21 321 23 HOH HOH . 
F 5 HOH A 22 322 30 HOH HOH . 
F 5 HOH A 23 323 38 HOH HOH . 
F 5 HOH A 24 324 27 HOH HOH . 
F 5 HOH A 25 325 93 HOH HOH . 
F 5 HOH A 26 326 1 HOH HOH . 
F 5 HOH A 27 327 91 HOH HOH . 
F 5 HOH A 28 328 85 HOH HOH . 
F 5 HOH A 29 329 79 HOH HOH . 
F 5 HOH A 30 330 6 HOH HOH . 
F 5 HOH A 31 331 26 HOH HOH . 
F 5 HOH A 32 332 62 HOH HOH . 
F 5 HOH A 33 333 42 HOH HOH . 
F 5 HOH A 34 334 19 HOH HOH . 
F 5 HOH A 35 335 68 HOH HOH . 
F 5 HOH A 36 336 61 HOH HOH . 
F 5 HOH A 37 337 89 HOH HOH . 
F 5 HOH A 38 338 10 HOH HOH . 
F 5 HOH A 39 339 4 HOH HOH . 
F 5 HOH A 40 340 51 HOH HOH . 
F 5 HOH A 41 341 48 HOH HOH . 
F 5 HOH A 42 342 74 HOH HOH . 
F 5 HOH A 43 343 90 HOH HOH . 
F 5 HOH A 44 344 8 HOH HOH . 
F 5 HOH A 45 345 81 HOH HOH . 
F 5 HOH A 46 346 22 HOH HOH . 
F 5 HOH A 47 347 82 HOH HOH . 
F 5 HOH A 48 348 57 HOH HOH . 
F 5 HOH A 49 349 43 HOH HOH . 
F 5 HOH A 50 350 39 HOH HOH . 
F 5 HOH A 51 351 15 HOH HOH . 
F 5 HOH A 52 352 71 HOH HOH . 
F 5 HOH A 53 353 14 HOH HOH . 
F 5 HOH A 54 354 29 HOH HOH . 
F 5 HOH A 55 355 87 HOH HOH . 
F 5 HOH A 56 356 35 HOH HOH . 
F 5 HOH A 57 357 77 HOH HOH . 
F 5 HOH A 58 358 28 HOH HOH . 
F 5 HOH A 59 359 45 HOH HOH . 
F 5 HOH A 60 360 20 HOH HOH . 
F 5 HOH A 61 361 49 HOH HOH . 
F 5 HOH A 62 362 41 HOH HOH . 
F 5 HOH A 63 363 58 HOH HOH . 
F 5 HOH A 64 364 47 HOH HOH . 
F 5 HOH A 65 365 17 HOH HOH . 
F 5 HOH A 66 366 16 HOH HOH . 
F 5 HOH A 67 367 46 HOH HOH . 
F 5 HOH A 68 368 2 HOH HOH . 
F 5 HOH A 69 369 72 HOH HOH . 
F 5 HOH A 70 370 52 HOH HOH . 
F 5 HOH A 71 371 50 HOH HOH . 
F 5 HOH A 72 372 88 HOH HOH . 
F 5 HOH A 73 373 86 HOH HOH . 
F 5 HOH A 74 374 12 HOH HOH . 
F 5 HOH A 75 375 83 HOH HOH . 
F 5 HOH A 76 376 75 HOH HOH . 
F 5 HOH A 77 377 80 HOH HOH . 
F 5 HOH A 78 378 59 HOH HOH . 
F 5 HOH A 79 379 44 HOH HOH . 
F 5 HOH A 80 380 18 HOH HOH . 
F 5 HOH A 81 381 69 HOH HOH . 
F 5 HOH A 82 382 78 HOH HOH . 
F 5 HOH A 83 383 65 HOH HOH . 
F 5 HOH A 84 384 40 HOH HOH . 
F 5 HOH A 85 385 21 HOH HOH . 
F 5 HOH A 86 386 70 HOH HOH . 
F 5 HOH A 87 387 67 HOH HOH . 
F 5 HOH A 88 388 32 HOH HOH . 
F 5 HOH A 89 389 37 HOH HOH . 
F 5 HOH A 90 390 64 HOH HOH . 
F 5 HOH A 91 391 73 HOH HOH . 
F 5 HOH A 92 392 25 HOH HOH . 
F 5 HOH A 93 393 54 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . B 2 -20.413 3.364 4.208 1 19.37 ? S DMS 201 A 1 
HETATM 2 O O DMS . . . B 2 -20.24 1.691 4.194 1 16.3 ? O DMS 201 A 1 
HETATM 3 C C1 DMS . . . B 2 -19.209 3.949 5.406 1 20.05 ? C1 DMS 201 A 1 
HETATM 4 C C2 DMS . . . B 2 -19.58 3.777 2.66 1 18.43 ? C2 DMS 201 A 1 
#
_model_server_stats.io_time_ms              60 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           315 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#