data_7FYP # _model_server_result.job_id SLEynwMGTufpHQtiE98_6w _model_server_result.datetime_utc '2024-10-10 11:20:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7fyp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7FYP # _exptl.entry_id 7FYP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 268.349 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(1S,2S)-2-({[(1R,2S,5R)-5-methyl-2-(propan-2-yl)cyclohexyl]oxy}carbonyl)cyclopropane-1-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7FYP _cell.length_a 32.402 _cell.length_b 53.772 _cell.length_c 75.141 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7FYP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C15 H24 O4' _chem_comp.formula_weight 268.349 _chem_comp.id W95 _chem_comp.mon_nstd_flag . _chem_comp.name '(1S,2S)-2-({[(1R,2S,5R)-5-methyl-2-(propan-2-yl)cyclohexyl]oxy}carbonyl)cyclopropane-1-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C07 O12 W95 doub 380 n n C07 O14 W95 sing 381 n n C02 C07 W95 sing 382 n n C02 C03 W95 sing 383 n n C02 C01 W95 sing 384 n n C01 C03 W95 sing 385 n n C01 C04 W95 sing 386 n n C04 O10 W95 doub 387 n n C04 O06 W95 sing 388 n n C05 O06 W95 sing 389 n n C05 C11 W95 sing 390 n n C05 C08 W95 sing 391 n n C16 C11 W95 sing 392 n n C16 C19 W95 sing 393 n n C16 C15 W95 sing 394 n n C15 C09 W95 sing 395 n n C08 C09 W95 sing 396 n n C08 C13 W95 sing 397 n n C13 C18 W95 sing 398 n n C13 C17 W95 sing 399 n n C01 H01 W95 sing 400 n n C02 H02 W95 sing 401 n n C05 H05 W95 sing 402 n n C11 H11 W95 sing 403 n n C11 H12 W95 sing 404 n n C13 H13 W95 sing 405 n n O14 H1 W95 sing 406 n n C15 H15 W95 sing 407 n n C15 H16 W95 sing 408 n n C16 H17 W95 sing 409 n n C17 H19 W95 sing 410 n n C17 H2A W95 sing 411 n n C17 H18 W95 sing 412 n n C18 H2C W95 sing 413 n n C18 H2D W95 sing 414 n n C18 H2B W95 sing 415 n n C19 H2E W95 sing 416 n n C19 H2F W95 sing 417 n n C19 H2G W95 sing 418 n n C03 H04 W95 sing 419 n n C03 H03 W95 sing 420 n n C09 H1A W95 sing 421 n n C09 H09 W95 sing 422 n n C08 H08 W95 sing 423 n n # _atom_sites.entry_id 7FYP _atom_sites.fract_transf_matrix[1][1] 0.030862 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018597 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013308 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 W95 A 1 201 1 W95 L0R . C 3 SO4 A 1 202 1 SO4 SO4 . D 3 SO4 A 1 203 3 SO4 SO4 . E 4 HOH A 1 301 89 HOH HOH . E 4 HOH A 2 302 140 HOH HOH . E 4 HOH A 3 303 152 HOH HOH . E 4 HOH A 4 304 57 HOH HOH . E 4 HOH A 5 305 96 HOH HOH . E 4 HOH A 6 306 148 HOH HOH . E 4 HOH A 7 307 119 HOH HOH . E 4 HOH A 8 308 33 HOH HOH . E 4 HOH A 9 309 151 HOH HOH . E 4 HOH A 10 310 91 HOH HOH . E 4 HOH A 11 311 135 HOH HOH . E 4 HOH A 12 312 62 HOH HOH . E 4 HOH A 13 313 22 HOH HOH . E 4 HOH A 14 314 35 HOH HOH . E 4 HOH A 15 315 102 HOH HOH . E 4 HOH A 16 316 8 HOH HOH . E 4 HOH A 17 317 127 HOH HOH . E 4 HOH A 18 318 147 HOH HOH . E 4 HOH A 19 319 105 HOH HOH . E 4 HOH A 20 320 12 HOH HOH . E 4 HOH A 21 321 110 HOH HOH . E 4 HOH A 22 322 3 HOH HOH . E 4 HOH A 23 323 144 HOH HOH . E 4 HOH A 24 324 65 HOH HOH . E 4 HOH A 25 325 42 HOH HOH . E 4 HOH A 26 326 79 HOH HOH . E 4 HOH A 27 327 145 HOH HOH . E 4 HOH A 28 328 73 HOH HOH . E 4 HOH A 29 329 52 HOH HOH . E 4 HOH A 30 330 93 HOH HOH . E 4 HOH A 31 331 30 HOH HOH . E 4 HOH A 32 332 121 HOH HOH . E 4 HOH A 33 333 81 HOH HOH . E 4 HOH A 34 334 131 HOH HOH . E 4 HOH A 35 335 82 HOH HOH . E 4 HOH A 36 336 15 HOH HOH . E 4 HOH A 37 337 83 HOH HOH . E 4 HOH A 38 338 69 HOH HOH . E 4 HOH A 39 339 9 HOH HOH . E 4 HOH A 40 340 95 HOH HOH . E 4 HOH A 41 341 24 HOH HOH . E 4 HOH A 42 342 71 HOH HOH . E 4 HOH A 43 343 36 HOH HOH . E 4 HOH A 44 344 118 HOH HOH . E 4 HOH A 45 345 47 HOH HOH . E 4 HOH A 46 346 11 HOH HOH . E 4 HOH A 47 347 16 HOH HOH . E 4 HOH A 48 348 28 HOH HOH . E 4 HOH A 49 349 34 HOH HOH . E 4 HOH A 50 350 141 HOH HOH . E 4 HOH A 51 351 109 HOH HOH . E 4 HOH A 52 352 17 HOH HOH . E 4 HOH A 53 353 39 HOH HOH . E 4 HOH A 54 354 59 HOH HOH . E 4 HOH A 55 355 76 HOH HOH . E 4 HOH A 56 356 1 HOH HOH . E 4 HOH A 57 357 92 HOH HOH . E 4 HOH A 58 358 70 HOH HOH . E 4 HOH A 59 359 74 HOH HOH . E 4 HOH A 60 360 6 HOH HOH . E 4 HOH A 61 361 7 HOH HOH . E 4 HOH A 62 362 136 HOH HOH . E 4 HOH A 63 363 38 HOH HOH . E 4 HOH A 64 364 10 HOH HOH . E 4 HOH A 65 365 132 HOH HOH . E 4 HOH A 66 366 60 HOH HOH . E 4 HOH A 67 367 29 HOH HOH . E 4 HOH A 68 368 64 HOH HOH . E 4 HOH A 69 369 4 HOH HOH . E 4 HOH A 70 370 85 HOH HOH . E 4 HOH A 71 371 123 HOH HOH . E 4 HOH A 72 372 139 HOH HOH . E 4 HOH A 73 373 66 HOH HOH . E 4 HOH A 74 374 61 HOH HOH . E 4 HOH A 75 375 54 HOH HOH . E 4 HOH A 76 376 117 HOH HOH . E 4 HOH A 77 377 23 HOH HOH . E 4 HOH A 78 378 49 HOH HOH . E 4 HOH A 79 379 13 HOH HOH . E 4 HOH A 80 380 14 HOH HOH . E 4 HOH A 81 381 86 HOH HOH . E 4 HOH A 82 382 5 HOH HOH . E 4 HOH A 83 383 19 HOH HOH . E 4 HOH A 84 384 25 HOH HOH . E 4 HOH A 85 385 48 HOH HOH . E 4 HOH A 86 386 21 HOH HOH . E 4 HOH A 87 387 50 HOH HOH . E 4 HOH A 88 388 53 HOH HOH . E 4 HOH A 89 389 150 HOH HOH . E 4 HOH A 90 390 41 HOH HOH . E 4 HOH A 91 391 20 HOH HOH . E 4 HOH A 92 392 2 HOH HOH . E 4 HOH A 93 393 55 HOH HOH . E 4 HOH A 94 394 75 HOH HOH . E 4 HOH A 95 395 94 HOH HOH . E 4 HOH A 96 396 26 HOH HOH . E 4 HOH A 97 397 146 HOH HOH . E 4 HOH A 98 398 106 HOH HOH . E 4 HOH A 99 399 63 HOH HOH . E 4 HOH A 100 400 32 HOH HOH . E 4 HOH A 101 401 78 HOH HOH . E 4 HOH A 102 402 56 HOH HOH . E 4 HOH A 103 403 44 HOH HOH . E 4 HOH A 104 404 149 HOH HOH . E 4 HOH A 105 405 51 HOH HOH . E 4 HOH A 106 406 43 HOH HOH . E 4 HOH A 107 407 46 HOH HOH . E 4 HOH A 108 408 100 HOH HOH . E 4 HOH A 109 409 67 HOH HOH . E 4 HOH A 110 410 88 HOH HOH . E 4 HOH A 111 411 103 HOH HOH . E 4 HOH A 112 412 40 HOH HOH . E 4 HOH A 113 413 58 HOH HOH . E 4 HOH A 114 414 31 HOH HOH . E 4 HOH A 115 415 45 HOH HOH . E 4 HOH A 116 416 125 HOH HOH . E 4 HOH A 117 417 116 HOH HOH . E 4 HOH A 118 418 154 HOH HOH . E 4 HOH A 119 419 129 HOH HOH . E 4 HOH A 120 420 153 HOH HOH . E 4 HOH A 121 421 122 HOH HOH . E 4 HOH A 122 422 104 HOH HOH . E 4 HOH A 123 423 18 HOH HOH . E 4 HOH A 124 424 72 HOH HOH . E 4 HOH A 125 425 126 HOH HOH . E 4 HOH A 126 426 68 HOH HOH . E 4 HOH A 127 427 99 HOH HOH . E 4 HOH A 128 428 111 HOH HOH . E 4 HOH A 129 429 37 HOH HOH . E 4 HOH A 130 430 134 HOH HOH . E 4 HOH A 131 431 120 HOH HOH . E 4 HOH A 132 432 107 HOH HOH . E 4 HOH A 133 433 101 HOH HOH . E 4 HOH A 134 434 124 HOH HOH . E 4 HOH A 135 435 128 HOH HOH . E 4 HOH A 136 436 108 HOH HOH . E 4 HOH A 137 437 114 HOH HOH . E 4 HOH A 138 438 98 HOH HOH . E 4 HOH A 139 439 80 HOH HOH . E 4 HOH A 140 440 90 HOH HOH . E 4 HOH A 141 441 113 HOH HOH . E 4 HOH A 142 442 27 HOH HOH . E 4 HOH A 143 443 138 HOH HOH . E 4 HOH A 144 444 97 HOH HOH . E 4 HOH A 145 445 130 HOH HOH . E 4 HOH A 146 446 137 HOH HOH . E 4 HOH A 147 447 143 HOH HOH . E 4 HOH A 148 448 115 HOH HOH . E 4 HOH A 149 449 133 HOH HOH . E 4 HOH A 150 450 87 HOH HOH . E 4 HOH A 151 451 112 HOH HOH . E 4 HOH A 152 452 77 HOH HOH . E 4 HOH A 153 453 142 HOH HOH . E 4 HOH A 154 454 84 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 W95 . . . B 2 6.548 7.451 16.954 1 15.36 ? C01 W95 201 A 1 HETATM 2 C C02 W95 . . . B 2 6.568 5.944 16.808 1 14.25 ? C02 W95 201 A 1 HETATM 3 C C04 W95 . . . B 2 5.967 7.991 18.254 1 15.83 ? C04 W95 201 A 1 HETATM 4 C C05 W95 . . . B 2 5.347 7.546 20.536 1 13.78 ? C05 W95 201 A 1 HETATM 5 C C07 W95 . . . B 2 6.309 5.416 15.382 1 14.83 ? C07 W95 201 A 1 HETATM 6 C C11 W95 . . . B 2 6.501 7.629 21.515 1 13.49 ? C11 W95 201 A 1 HETATM 7 O O12 W95 . . . B 2 6.666 6.119 14.418 1 18.71 ? O12 W95 201 A 1 HETATM 8 C C13 W95 . . . B 2 3.292 6.265 19.79 1 17.45 ? C13 W95 201 A 1 HETATM 9 O O14 W95 . . . B 2 5.719 4.34 15.322 1 14.75 ? O14 W95 201 A 1 HETATM 10 C C15 W95 . . . B 2 4.894 7.077 23.353 1 15.67 ? C15 W95 201 A 1 HETATM 11 C C16 W95 . . . B 2 5.96 8.011 22.883 1 13.72 ? C16 W95 201 A 1 HETATM 12 C C17 W95 . . . B 2 2.284 7.438 19.61 1 16.95 ? C17 W95 201 A 1 HETATM 13 C C18 W95 . . . B 2 2.44 4.97 20.016 1 18.85 ? C18 W95 201 A 1 HETATM 14 C C19 W95 . . . B 2 7.148 8.061 23.885 1 14.48 ? C19 W95 201 A 1 HETATM 15 C C03 W95 . . . B 2 7.829 6.646 17.101 1 16.08 ? C03 W95 201 A 1 HETATM 16 O O10 W95 . . . B 2 5.657 9.172 18.342 1 18.9 ? O10 W95 201 A 1 HETATM 17 O O06 W95 . . . B 2 5.93 7.119 19.268 1 14.38 ? O06 W95 201 A 1 HETATM 18 C C09 W95 . . . B 2 3.755 6.939 22.306 1 15.51 ? C09 W95 201 A 1 HETATM 19 C C08 W95 . . . B 2 4.33 6.52 20.959 1 15.62 ? C08 W95 201 A 1 HETATM 20 H H01 W95 . . . B 2 6.42 8.069 16.066 1 16.63 ? H01 W95 201 A 1 HETATM 21 H H02 W95 . . . B 2 6.124 5.342 17.6 1 16.87 ? H02 W95 201 A 1 HETATM 22 H H05 W95 . . . B 2 4.869 8.522 20.477 1 15.01 ? H05 W95 201 A 1 HETATM 23 H H11 W95 . . . B 2 7.213 8.382 21.18 1 15.24 ? H11 W95 201 A 1 HETATM 24 H H12 W95 . . . B 2 6.996 6.66 21.577 1 15.26 ? H12 W95 201 A 1 HETATM 25 H H13 W95 . . . B 2 3.829 6.136 18.853 1 17.89 ? H13 W95 201 A 1 HETATM 26 H H15 W95 . . . B 2 4.376 7.531 24.146 1 15.97 ? H15 W95 201 A 1 HETATM 27 H H16 W95 . . . B 2 5.193 6.095 23.509 1 15.34 ? H16 W95 201 A 1 HETATM 28 H H17 W95 . . . B 2 5.53 9.01 22.813 1 15.22 ? H17 W95 201 A 1 HETATM 29 H H19 W95 . . . B 2 1.578 7.429 20.437 1 17.49 ? H19 W95 201 A 1 HETATM 30 H H2A W95 . . . B 2 1.743 7.309 18.674 1 17.81 ? H2A W95 201 A 1 HETATM 31 H H18 W95 . . . B 2 2.81 8.39 19.59 1 17.77 ? H18 W95 201 A 1 HETATM 32 H H2C W95 . . . B 2 1.922 5.035 20.97 1 17.81 ? H2C W95 201 A 1 HETATM 33 H H2D W95 . . . B 2 3.093 4.098 20.012 1 19.62 ? H2D W95 201 A 1 HETATM 34 H H2B W95 . . . B 2 1.706 4.878 19.215 1 19.58 ? H2B W95 201 A 1 HETATM 35 H H2E W95 . . . B 2 7.581 7.065 23.984 1 14.01 ? H2E W95 201 A 1 HETATM 36 H H2F W95 . . . B 2 6.791 8.399 24.857 1 15.98 ? H2F W95 201 A 1 HETATM 37 H H2G W95 . . . B 2 7.907 8.749 23.516 1 16.14 ? H2G W95 201 A 1 HETATM 38 H H04 W95 . . . B 2 8.569 6.718 16.304 1 16.49 ? H04 W95 201 A 1 HETATM 39 H H03 W95 . . . B 2 8.246 6.548 18.104 1 16.79 ? H03 W95 201 A 1 HETATM 40 H H1A W95 . . . B 2 3.252 7.898 22.202 1 16.19 ? H1A W95 201 A 1 HETATM 41 H H09 W95 . . . B 2 3.042 6.19 22.647 1 17.36 ? H09 W95 201 A 1 HETATM 42 H H08 W95 . . . B 2 4.855 5.584 21.128 1 15.86 ? H08 W95 201 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 42 #