data_7FYS # _model_server_result.job_id 1mZALR-3d61RnAqmpqAxNw _model_server_result.datetime_utc '2024-12-27 01:10:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7fys # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7FYS # _exptl.entry_id 7FYS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 293.361 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (5R)-7-(4-hydroxyphenyl)-1,8-dithia-3-azaspiro[4.5]dec-6-ene-2,4-dione _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7FYS _cell.length_a 32.51 _cell.length_b 53.896 _cell.length_c 74.953 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7FYS _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C13 H11 N O3 S2' _chem_comp.formula_weight 293.361 _chem_comp.id W9K _chem_comp.mon_nstd_flag . _chem_comp.name (5R)-7-(4-hydroxyphenyl)-1,8-dithia-3-azaspiro[4.5]dec-6-ene-2,4-dione _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 C02 W9K sing 389 n n C01 S03 W9K sing 390 n n C01 C04 W9K sing 391 n n C01 C05 W9K sing 392 n n C02 C06 W9K doub 393 n n S03 C07 W9K sing 394 n n C04 N08 W9K sing 395 n n C04 O09 W9K doub 396 n n C05 C10 W9K sing 397 n n C06 C11 W9K sing 398 n n C06 S12 W9K sing 399 n n C07 N08 W9K sing 400 n n C07 O13 W9K doub 401 n n C10 S12 W9K sing 402 n n C11 C14 W9K doub 403 n y C11 C15 W9K sing 404 n y C14 C16 W9K sing 405 n y C15 C17 W9K doub 406 n y C16 C18 W9K doub 407 n y C17 C18 W9K sing 408 n y C18 O19 W9K sing 409 n n C02 H21 W9K sing 410 n n C05 H22 W9K sing 411 n n C05 H23 W9K sing 412 n n C10 H26 W9K sing 413 n n C10 H25 W9K sing 414 n n C15 H28 W9K sing 415 n n C16 H29 W9K sing 416 n n C17 H30 W9K sing 417 n n N08 H24 W9K sing 418 n n C14 H27 W9K sing 419 n n O19 H1 W9K sing 420 n n # _atom_sites.entry_id 7FYS _atom_sites.fract_transf_matrix[1][1] 0.03076 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018554 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013342 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 W9K A 1 201 1 W9K L0R . C 3 SO4 A 1 202 1 SO4 SO4 . D 4 DMS A 1 203 1 DMS DMS . E 3 SO4 A 1 204 3 SO4 SO4 . F 5 HOH A 1 301 193 HOH HOH . F 5 HOH A 2 302 189 HOH HOH . F 5 HOH A 3 303 191 HOH HOH . F 5 HOH A 4 304 198 HOH HOH . F 5 HOH A 5 305 89 HOH HOH . F 5 HOH A 6 306 55 HOH HOH . F 5 HOH A 7 307 177 HOH HOH . F 5 HOH A 8 308 43 HOH HOH . F 5 HOH A 9 309 46 HOH HOH . F 5 HOH A 10 310 59 HOH HOH . F 5 HOH A 11 311 181 HOH HOH . F 5 HOH A 12 312 22 HOH HOH . F 5 HOH A 13 313 81 HOH HOH . F 5 HOH A 14 314 116 HOH HOH . F 5 HOH A 15 315 54 HOH HOH . F 5 HOH A 16 316 147 HOH HOH . F 5 HOH A 17 317 121 HOH HOH . F 5 HOH A 18 318 132 HOH HOH . F 5 HOH A 19 319 168 HOH HOH . F 5 HOH A 20 320 13 HOH HOH . F 5 HOH A 21 321 8 HOH HOH . F 5 HOH A 22 322 40 HOH HOH . F 5 HOH A 23 323 41 HOH HOH . F 5 HOH A 24 324 99 HOH HOH . F 5 HOH A 25 325 155 HOH HOH . F 5 HOH A 26 326 119 HOH HOH . F 5 HOH A 27 327 167 HOH HOH . F 5 HOH A 28 328 21 HOH HOH . F 5 HOH A 29 329 118 HOH HOH . F 5 HOH A 30 330 48 HOH HOH . F 5 HOH A 31 331 176 HOH HOH . F 5 HOH A 32 332 11 HOH HOH . F 5 HOH A 33 333 140 HOH HOH . F 5 HOH A 34 334 38 HOH HOH . F 5 HOH A 35 335 115 HOH HOH . F 5 HOH A 36 336 68 HOH HOH . F 5 HOH A 37 337 63 HOH HOH . F 5 HOH A 38 338 84 HOH HOH . F 5 HOH A 39 339 25 HOH HOH . F 5 HOH A 40 340 117 HOH HOH . F 5 HOH A 41 341 96 HOH HOH . F 5 HOH A 42 342 166 HOH HOH . F 5 HOH A 43 343 42 HOH HOH . F 5 HOH A 44 344 87 HOH HOH . F 5 HOH A 45 345 18 HOH HOH . F 5 HOH A 46 346 67 HOH HOH . F 5 HOH A 47 347 51 HOH HOH . F 5 HOH A 48 348 16 HOH HOH . F 5 HOH A 49 349 56 HOH HOH . F 5 HOH A 50 350 69 HOH HOH . F 5 HOH A 51 351 174 HOH HOH . F 5 HOH A 52 352 129 HOH HOH . F 5 HOH A 53 353 86 HOH HOH . F 5 HOH A 54 354 32 HOH HOH . F 5 HOH A 55 355 103 HOH HOH . F 5 HOH A 56 356 156 HOH HOH . F 5 HOH A 57 357 137 HOH HOH . F 5 HOH A 58 358 120 HOH HOH . F 5 HOH A 59 359 80 HOH HOH . F 5 HOH A 60 360 62 HOH HOH . F 5 HOH A 61 361 164 HOH HOH . F 5 HOH A 62 362 10 HOH HOH . F 5 HOH A 63 363 124 HOH HOH . F 5 HOH A 64 364 5 HOH HOH . F 5 HOH A 65 365 128 HOH HOH . F 5 HOH A 66 366 71 HOH HOH . F 5 HOH A 67 367 34 HOH HOH . F 5 HOH A 68 368 35 HOH HOH . F 5 HOH A 69 369 77 HOH HOH . F 5 HOH A 70 370 9 HOH HOH . F 5 HOH A 71 371 2 HOH HOH . F 5 HOH A 72 372 112 HOH HOH . F 5 HOH A 73 373 6 HOH HOH . F 5 HOH A 74 374 151 HOH HOH . F 5 HOH A 75 375 60 HOH HOH . F 5 HOH A 76 376 4 HOH HOH . F 5 HOH A 77 377 106 HOH HOH . F 5 HOH A 78 378 136 HOH HOH . F 5 HOH A 79 379 1 HOH HOH . F 5 HOH A 80 380 195 HOH HOH . F 5 HOH A 81 381 20 HOH HOH . F 5 HOH A 82 382 161 HOH HOH . F 5 HOH A 83 383 100 HOH HOH . F 5 HOH A 84 384 97 HOH HOH . F 5 HOH A 85 385 44 HOH HOH . F 5 HOH A 86 386 76 HOH HOH . F 5 HOH A 87 387 110 HOH HOH . F 5 HOH A 88 388 175 HOH HOH . F 5 HOH A 89 389 14 HOH HOH . F 5 HOH A 90 390 88 HOH HOH . F 5 HOH A 91 391 28 HOH HOH . F 5 HOH A 92 392 23 HOH HOH . F 5 HOH A 93 393 15 HOH HOH . F 5 HOH A 94 394 19 HOH HOH . F 5 HOH A 95 395 127 HOH HOH . F 5 HOH A 96 396 73 HOH HOH . F 5 HOH A 97 397 27 HOH HOH . F 5 HOH A 98 398 29 HOH HOH . F 5 HOH A 99 399 139 HOH HOH . F 5 HOH A 100 400 72 HOH HOH . F 5 HOH A 101 401 160 HOH HOH . F 5 HOH A 102 402 98 HOH HOH . F 5 HOH A 103 403 79 HOH HOH . F 5 HOH A 104 404 24 HOH HOH . F 5 HOH A 105 405 12 HOH HOH . F 5 HOH A 106 406 183 HOH HOH . F 5 HOH A 107 407 31 HOH HOH . F 5 HOH A 108 408 58 HOH HOH . F 5 HOH A 109 409 39 HOH HOH . F 5 HOH A 110 410 7 HOH HOH . F 5 HOH A 111 411 49 HOH HOH . F 5 HOH A 112 412 3 HOH HOH . F 5 HOH A 113 413 109 HOH HOH . F 5 HOH A 114 414 163 HOH HOH . F 5 HOH A 115 415 70 HOH HOH . F 5 HOH A 116 416 83 HOH HOH . F 5 HOH A 117 417 52 HOH HOH . F 5 HOH A 118 418 179 HOH HOH . F 5 HOH A 119 419 37 HOH HOH . F 5 HOH A 120 420 169 HOH HOH . F 5 HOH A 121 421 26 HOH HOH . F 5 HOH A 122 422 171 HOH HOH . F 5 HOH A 123 423 93 HOH HOH . F 5 HOH A 124 424 61 HOH HOH . F 5 HOH A 125 425 162 HOH HOH . F 5 HOH A 126 426 101 HOH HOH . F 5 HOH A 127 427 57 HOH HOH . F 5 HOH A 128 428 165 HOH HOH . F 5 HOH A 129 429 111 HOH HOH . F 5 HOH A 130 430 78 HOH HOH . F 5 HOH A 131 431 45 HOH HOH . F 5 HOH A 132 432 36 HOH HOH . F 5 HOH A 133 433 75 HOH HOH . F 5 HOH A 134 434 50 HOH HOH . F 5 HOH A 135 435 133 HOH HOH . F 5 HOH A 136 436 53 HOH HOH . F 5 HOH A 137 437 173 HOH HOH . F 5 HOH A 138 438 33 HOH HOH . F 5 HOH A 139 439 125 HOH HOH . F 5 HOH A 140 440 130 HOH HOH . F 5 HOH A 141 441 82 HOH HOH . F 5 HOH A 142 442 178 HOH HOH . F 5 HOH A 143 443 157 HOH HOH . F 5 HOH A 144 444 172 HOH HOH . F 5 HOH A 145 445 66 HOH HOH . F 5 HOH A 146 446 159 HOH HOH . F 5 HOH A 147 447 114 HOH HOH . F 5 HOH A 148 448 158 HOH HOH . F 5 HOH A 149 449 85 HOH HOH . F 5 HOH A 150 450 141 HOH HOH . F 5 HOH A 151 451 135 HOH HOH . F 5 HOH A 152 452 180 HOH HOH . F 5 HOH A 153 453 74 HOH HOH . F 5 HOH A 154 454 64 HOH HOH . F 5 HOH A 155 455 91 HOH HOH . F 5 HOH A 156 456 113 HOH HOH . F 5 HOH A 157 457 153 HOH HOH . F 5 HOH A 158 458 170 HOH HOH . F 5 HOH A 159 459 149 HOH HOH . F 5 HOH A 160 460 154 HOH HOH . F 5 HOH A 161 461 152 HOH HOH . F 5 HOH A 162 462 30 HOH HOH . F 5 HOH A 163 463 199 HOH HOH . F 5 HOH A 164 464 196 HOH HOH . F 5 HOH A 165 465 148 HOH HOH . F 5 HOH A 166 466 138 HOH HOH . F 5 HOH A 167 467 190 HOH HOH . F 5 HOH A 168 468 92 HOH HOH . F 5 HOH A 169 469 47 HOH HOH . F 5 HOH A 170 470 142 HOH HOH . F 5 HOH A 171 471 126 HOH HOH . F 5 HOH A 172 472 102 HOH HOH . F 5 HOH A 173 473 90 HOH HOH . F 5 HOH A 174 474 94 HOH HOH . F 5 HOH A 175 475 188 HOH HOH . F 5 HOH A 176 476 131 HOH HOH . F 5 HOH A 177 477 146 HOH HOH . F 5 HOH A 178 478 192 HOH HOH . F 5 HOH A 179 479 107 HOH HOH . F 5 HOH A 180 480 187 HOH HOH . F 5 HOH A 181 481 145 HOH HOH . F 5 HOH A 182 482 185 HOH HOH . F 5 HOH A 183 483 123 HOH HOH . F 5 HOH A 184 484 17 HOH HOH . F 5 HOH A 185 485 122 HOH HOH . F 5 HOH A 186 486 150 HOH HOH . F 5 HOH A 187 487 104 HOH HOH . F 5 HOH A 188 488 184 HOH HOH . F 5 HOH A 189 489 194 HOH HOH . F 5 HOH A 190 490 105 HOH HOH . F 5 HOH A 191 491 186 HOH HOH . F 5 HOH A 192 492 144 HOH HOH . F 5 HOH A 193 493 182 HOH HOH . F 5 HOH A 194 494 108 HOH HOH . F 5 HOH A 195 495 95 HOH HOH . F 5 HOH A 196 496 197 HOH HOH . F 5 HOH A 197 497 143 HOH HOH . F 5 HOH A 198 498 134 HOH HOH . F 5 HOH A 199 499 65 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 W9K . . . B 2 6.738 7.411 17.604 1 23.91 ? C01 W9K 201 A 1 HETATM 2 C C02 W9K . . . B 2 5.819 7.184 18.778 1 22.9 ? C02 W9K 201 A 1 HETATM 3 C C04 W9K . . . B 2 5.839 7.877 16.384 1 23.7 ? C04 W9K 201 A 1 HETATM 4 C C05 W9K . . . B 2 7.845 8.421 17.956 1 23.19 ? C05 W9K 201 A 1 HETATM 5 C C06 W9K . . . B 2 5.916 7.586 20.094 1 19.28 ? C06 W9K 201 A 1 HETATM 6 C C07 W9K . . . B 2 6.452 5.723 15.678 1 16.21 ? C07 W9K 201 A 1 HETATM 7 C C10 W9K . . . B 2 8.343 8.101 19.355 1 21.86 ? C10 W9K 201 A 1 HETATM 8 C C11 W9K . . . B 2 4.919 7.243 21.136 1 21.44 ? C11 W9K 201 A 1 HETATM 9 C C15 W9K . . . B 2 5.316 7.192 22.523 1 27.76 ? C15 W9K 201 A 1 HETATM 10 C C16 W9K . . . B 2 2.694 6.594 21.814 1 34.6 ? C16 W9K 201 A 1 HETATM 11 C C17 W9K . . . B 2 4.423 6.826 23.525 1 25.21 ? C17 W9K 201 A 1 HETATM 12 C C18 W9K . . . B 2 3.085 6.544 23.173 1 25.58 ? C18 W9K 201 A 1 HETATM 13 S S03 W9K . . . B 2 7.493 5.823 17.106 1 23.57 ? S03 W9K 201 A 1 HETATM 14 N N08 W9K . . . B 2 5.737 6.853 15.331 1 18.71 ? N08 W9K 201 A 1 HETATM 15 O O09 W9K . . . B 2 5.184 9.029 16.282 1 24.48 ? O09 W9K 201 A 1 HETATM 16 S S12 W9K . . . B 2 7.266 8.474 20.722 1 23.54 ? S12 W9K 201 A 1 HETATM 17 O O13 W9K . . . B 2 6.28 4.658 15.154 1 20.7 ? O13 W9K 201 A 1 HETATM 18 C C14 W9K . . . B 2 3.586 6.913 20.815 1 30.24 ? C14 W9K 201 A 1 HETATM 19 O O19 W9K . . . B 2 2.209 6.241 24.217 1 32.3 ? O19 W9K 201 A 1 HETATM 20 H H21 W9K . . . B 2 4.969 6.629 18.484 1 22.3 ? H21 W9K 201 A 1 HETATM 21 H H22 W9K . . . B 2 7.448 9.424 17.942 1 22.78 ? H22 W9K 201 A 1 HETATM 22 H H23 W9K . . . B 2 8.661 8.345 17.25 1 22.88 ? H23 W9K 201 A 1 HETATM 23 H H26 W9K . . . B 2 9.267 8.641 19.508 1 21.59 ? H26 W9K 201 A 1 HETATM 24 H H25 W9K . . . B 2 8.564 7.044 19.398 1 21.58 ? H25 W9K 201 A 1 HETATM 25 H H28 W9K . . . B 2 6.318 7.404 22.787 1 25.54 ? H28 W9K 201 A 1 HETATM 26 H H29 W9K . . . B 2 1.695 6.375 21.541 1 31.28 ? H29 W9K 201 A 1 HETATM 27 H H30 W9K . . . B 2 4.723 6.819 24.539 1 21.97 ? H30 W9K 201 A 1 HETATM 28 H H27 W9K . . . B 2 3.245 6.947 19.814 1 26.83 ? H27 W9K 201 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 340 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 28 #