data_7FZQ # _model_server_result.job_id hYA2KWjZ2wBEgMJfPAu1Ew _model_server_result.datetime_utc '2024-11-19 09:38:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7fzq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":201}' # _entry.id 7FZQ # _exptl.entry_id 7FZQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.693 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NICKEL (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 122.36 _cell.angle_gamma 90 _cell.entry_id 7FZQ _cell.length_a 134.852 _cell.length_b 29.864 _cell.length_c 81.06 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7FZQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,F 1 1 B,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 3 A HIS -1 1_555 C NI NI . A NI 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc2 A OD2 ASP 6 A ASP 2 1_555 C NI NI . A NI 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc3 A ND1 HIS 58 A HIS 54 1_555 C NI NI . A NI 201 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? metalc ? metalc4 A OD1 ASP 114 A ASP 110 1_555 C NI NI . A NI 201 4_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? metalc ? metalc5 B ND1 HIS 3 B HIS -1 1_555 E NI NI . B NI 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc6 B OD2 ASP 6 B ASP 2 1_555 E NI NI . B NI 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? metalc ? metalc7 B ND1 HIS 58 B HIS 54 1_555 E NI NI . B NI 201 4_556 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc8 B OD1 ASP 114 B ASP 110 1_555 E NI NI . B NI 201 4_546 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? # _chem_comp.formula 'Ni 2' _chem_comp.formula_weight 58.693 _chem_comp.id NI _chem_comp.mon_nstd_flag . _chem_comp.name 'NICKEL (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7FZQ _atom_sites.fract_transf_matrix[1][1] 0.007416 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004698 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.033485 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014604 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NI A 1 201 2 NI NI . D 3 MYR A 1 202 1 MYR MYR . E 2 NI B 1 201 1 NI NI . F 4 HOH A 1 301 62 HOH HOH . F 4 HOH A 2 302 73 HOH HOH . F 4 HOH A 3 303 50 HOH HOH . F 4 HOH A 4 304 70 HOH HOH . F 4 HOH A 5 305 22 HOH HOH . F 4 HOH A 6 306 69 HOH HOH . F 4 HOH A 7 307 59 HOH HOH . F 4 HOH A 8 308 52 HOH HOH . F 4 HOH A 9 309 56 HOH HOH . F 4 HOH A 10 310 116 HOH HOH . F 4 HOH A 11 311 105 HOH HOH . F 4 HOH A 12 312 197 HOH HOH . F 4 HOH A 13 313 153 HOH HOH . F 4 HOH A 14 314 134 HOH HOH . F 4 HOH A 15 315 58 HOH HOH . F 4 HOH A 16 316 170 HOH HOH . F 4 HOH A 17 317 194 HOH HOH . F 4 HOH A 18 318 189 HOH HOH . F 4 HOH A 19 319 163 HOH HOH . F 4 HOH A 20 320 158 HOH HOH . F 4 HOH A 21 321 17 HOH HOH . F 4 HOH A 22 322 195 HOH HOH . F 4 HOH A 23 323 16 HOH HOH . F 4 HOH A 24 324 54 HOH HOH . F 4 HOH A 25 325 32 HOH HOH . F 4 HOH A 26 326 147 HOH HOH . F 4 HOH A 27 327 167 HOH HOH . F 4 HOH A 28 328 60 HOH HOH . F 4 HOH A 29 329 228 HOH HOH . F 4 HOH A 30 330 208 HOH HOH . F 4 HOH A 31 331 150 HOH HOH . F 4 HOH A 32 332 61 HOH HOH . F 4 HOH A 33 333 1 HOH HOH . F 4 HOH A 34 334 226 HOH HOH . F 4 HOH A 35 335 71 HOH HOH . F 4 HOH A 36 336 11 HOH HOH . F 4 HOH A 37 337 192 HOH HOH . F 4 HOH A 38 338 155 HOH HOH . F 4 HOH A 39 339 133 HOH HOH . F 4 HOH A 40 340 40 HOH HOH . F 4 HOH A 41 341 141 HOH HOH . F 4 HOH A 42 342 37 HOH HOH . F 4 HOH A 43 343 207 HOH HOH . F 4 HOH A 44 344 201 HOH HOH . F 4 HOH A 45 345 129 HOH HOH . F 4 HOH A 46 346 63 HOH HOH . F 4 HOH A 47 347 13 HOH HOH . F 4 HOH A 48 348 202 HOH HOH . F 4 HOH A 49 349 172 HOH HOH . F 4 HOH A 50 350 41 HOH HOH . F 4 HOH A 51 351 29 HOH HOH . F 4 HOH A 52 352 4 HOH HOH . F 4 HOH A 53 353 49 HOH HOH . F 4 HOH A 54 354 5 HOH HOH . F 4 HOH A 55 355 124 HOH HOH . F 4 HOH A 56 356 45 HOH HOH . F 4 HOH A 57 357 51 HOH HOH . F 4 HOH A 58 358 42 HOH HOH . F 4 HOH A 59 359 121 HOH HOH . F 4 HOH A 60 360 14 HOH HOH . F 4 HOH A 61 361 46 HOH HOH . F 4 HOH A 62 362 148 HOH HOH . F 4 HOH A 63 363 225 HOH HOH . F 4 HOH A 64 364 186 HOH HOH . F 4 HOH A 65 365 198 HOH HOH . F 4 HOH A 66 366 28 HOH HOH . F 4 HOH A 67 367 72 HOH HOH . F 4 HOH A 68 368 182 HOH HOH . F 4 HOH A 69 369 127 HOH HOH . F 4 HOH A 70 370 33 HOH HOH . F 4 HOH A 71 371 68 HOH HOH . F 4 HOH A 72 372 166 HOH HOH . F 4 HOH A 73 373 39 HOH HOH . F 4 HOH A 74 374 19 HOH HOH . F 4 HOH A 75 375 142 HOH HOH . F 4 HOH A 76 376 103 HOH HOH . F 4 HOH A 77 377 53 HOH HOH . F 4 HOH A 78 378 48 HOH HOH . F 4 HOH A 79 379 160 HOH HOH . F 4 HOH A 80 380 156 HOH HOH . F 4 HOH A 81 381 137 HOH HOH . F 4 HOH A 82 382 203 HOH HOH . F 4 HOH A 83 383 64 HOH HOH . F 4 HOH A 84 384 100 HOH HOH . F 4 HOH A 85 385 175 HOH HOH . F 4 HOH A 86 386 43 HOH HOH . F 4 HOH A 87 387 190 HOH HOH . F 4 HOH A 88 388 224 HOH HOH . F 4 HOH A 89 389 101 HOH HOH . F 4 HOH A 90 390 131 HOH HOH . F 4 HOH A 91 391 165 HOH HOH . F 4 HOH A 92 392 212 HOH HOH . F 4 HOH A 93 393 12 HOH HOH . F 4 HOH A 94 394 152 HOH HOH . F 4 HOH A 95 395 140 HOH HOH . F 4 HOH A 96 396 213 HOH HOH . F 4 HOH A 97 397 44 HOH HOH . F 4 HOH A 98 398 179 HOH HOH . F 4 HOH A 99 399 36 HOH HOH . F 4 HOH A 100 400 106 HOH HOH . F 4 HOH A 101 401 178 HOH HOH . F 4 HOH A 102 402 115 HOH HOH . F 4 HOH A 103 403 55 HOH HOH . F 4 HOH A 104 404 176 HOH HOH . F 4 HOH A 105 405 57 HOH HOH . F 4 HOH A 106 406 65 HOH HOH . F 4 HOH A 107 407 187 HOH HOH . F 4 HOH A 108 408 98 HOH HOH . F 4 HOH A 109 409 34 HOH HOH . F 4 HOH A 110 410 35 HOH HOH . F 4 HOH A 111 411 219 HOH HOH . F 4 HOH A 112 412 47 HOH HOH . F 4 HOH A 113 413 173 HOH HOH . F 4 HOH A 114 414 99 HOH HOH . F 4 HOH A 115 415 227 HOH HOH . F 4 HOH A 116 416 223 HOH HOH . F 4 HOH A 117 417 222 HOH HOH . F 4 HOH A 118 418 188 HOH HOH . G 4 HOH B 1 301 91 HOH HOH . G 4 HOH B 2 302 86 HOH HOH . G 4 HOH B 3 303 110 HOH HOH . G 4 HOH B 4 304 97 HOH HOH . G 4 HOH B 5 305 128 HOH HOH . G 4 HOH B 6 306 171 HOH HOH . G 4 HOH B 7 307 220 HOH HOH . G 4 HOH B 8 308 209 HOH HOH . G 4 HOH B 9 309 164 HOH HOH . G 4 HOH B 10 310 31 HOH HOH . G 4 HOH B 11 311 109 HOH HOH . G 4 HOH B 12 312 7 HOH HOH . G 4 HOH B 13 313 205 HOH HOH . G 4 HOH B 14 314 25 HOH HOH . G 4 HOH B 15 315 82 HOH HOH . G 4 HOH B 16 316 132 HOH HOH . G 4 HOH B 17 317 200 HOH HOH . G 4 HOH B 18 318 120 HOH HOH . G 4 HOH B 19 319 20 HOH HOH . G 4 HOH B 20 320 83 HOH HOH . G 4 HOH B 21 321 90 HOH HOH . G 4 HOH B 22 322 80 HOH HOH . G 4 HOH B 23 323 151 HOH HOH . G 4 HOH B 24 324 10 HOH HOH . G 4 HOH B 25 325 74 HOH HOH . G 4 HOH B 26 326 8 HOH HOH . G 4 HOH B 27 327 2 HOH HOH . G 4 HOH B 28 328 126 HOH HOH . G 4 HOH B 29 329 94 HOH HOH . G 4 HOH B 30 330 81 HOH HOH . G 4 HOH B 31 331 135 HOH HOH . G 4 HOH B 32 332 85 HOH HOH . G 4 HOH B 33 333 15 HOH HOH . G 4 HOH B 34 334 30 HOH HOH . G 4 HOH B 35 335 78 HOH HOH . G 4 HOH B 36 336 118 HOH HOH . G 4 HOH B 37 337 138 HOH HOH . G 4 HOH B 38 338 96 HOH HOH . G 4 HOH B 39 339 161 HOH HOH . G 4 HOH B 40 340 6 HOH HOH . G 4 HOH B 41 341 204 HOH HOH . G 4 HOH B 42 342 3 HOH HOH . G 4 HOH B 43 343 112 HOH HOH . G 4 HOH B 44 344 196 HOH HOH . G 4 HOH B 45 345 18 HOH HOH . G 4 HOH B 46 346 125 HOH HOH . G 4 HOH B 47 347 169 HOH HOH . G 4 HOH B 48 348 38 HOH HOH . G 4 HOH B 49 349 154 HOH HOH . G 4 HOH B 50 350 23 HOH HOH . G 4 HOH B 51 351 21 HOH HOH . G 4 HOH B 52 352 145 HOH HOH . G 4 HOH B 53 353 67 HOH HOH . G 4 HOH B 54 354 95 HOH HOH . G 4 HOH B 55 355 76 HOH HOH . G 4 HOH B 56 356 107 HOH HOH . G 4 HOH B 57 357 139 HOH HOH . G 4 HOH B 58 358 111 HOH HOH . G 4 HOH B 59 359 93 HOH HOH . G 4 HOH B 60 360 77 HOH HOH . G 4 HOH B 61 361 104 HOH HOH . G 4 HOH B 62 362 221 HOH HOH . G 4 HOH B 63 363 75 HOH HOH . G 4 HOH B 64 364 26 HOH HOH . G 4 HOH B 65 365 27 HOH HOH . G 4 HOH B 66 366 144 HOH HOH . G 4 HOH B 67 367 177 HOH HOH . G 4 HOH B 68 368 117 HOH HOH . G 4 HOH B 69 369 159 HOH HOH . G 4 HOH B 70 370 88 HOH HOH . G 4 HOH B 71 371 214 HOH HOH . G 4 HOH B 72 372 113 HOH HOH . G 4 HOH B 73 373 9 HOH HOH . G 4 HOH B 74 374 191 HOH HOH . G 4 HOH B 75 375 143 HOH HOH . G 4 HOH B 76 376 168 HOH HOH . G 4 HOH B 77 377 130 HOH HOH . G 4 HOH B 78 378 119 HOH HOH . G 4 HOH B 79 379 211 HOH HOH . G 4 HOH B 80 380 136 HOH HOH . G 4 HOH B 81 381 24 HOH HOH . G 4 HOH B 82 382 157 HOH HOH . G 4 HOH B 83 383 89 HOH HOH . G 4 HOH B 84 384 84 HOH HOH . G 4 HOH B 85 385 162 HOH HOH . G 4 HOH B 86 386 146 HOH HOH . G 4 HOH B 87 387 79 HOH HOH . G 4 HOH B 88 388 102 HOH HOH . G 4 HOH B 89 389 181 HOH HOH . G 4 HOH B 90 390 122 HOH HOH . G 4 HOH B 91 391 149 HOH HOH . G 4 HOH B 92 392 185 HOH HOH . G 4 HOH B 93 393 123 HOH HOH . G 4 HOH B 94 394 92 HOH HOH . G 4 HOH B 95 395 210 HOH HOH . G 4 HOH B 96 396 206 HOH HOH . G 4 HOH B 97 397 114 HOH HOH . G 4 HOH B 98 398 108 HOH HOH . G 4 HOH B 99 399 193 HOH HOH . G 4 HOH B 100 400 218 HOH HOH . G 4 HOH B 101 401 183 HOH HOH . G 4 HOH B 102 402 87 HOH HOH . G 4 HOH B 103 403 215 HOH HOH . G 4 HOH B 104 404 216 HOH HOH . G 4 HOH B 105 405 199 HOH HOH . G 4 HOH B 106 406 66 HOH HOH . G 4 HOH B 107 407 174 HOH HOH . G 4 HOH B 108 408 217 HOH HOH . G 4 HOH B 109 409 184 HOH HOH . G 4 HOH B 110 410 180 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NI _atom_site.label_atom_id NI _atom_site.label_comp_id NI _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x 16.968 _atom_site.Cartn_y -11.326 _atom_site.Cartn_z 41.456 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 13.64 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id NI _atom_site.auth_comp_id NI _atom_site.auth_seq_id 201 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #