data_7G07 # _model_server_result.job_id tMWODQlxyQL8r5Zm22n4Kw _model_server_result.datetime_utc '2024-11-15 02:59:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7g07 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7G07 # _exptl.entry_id 7G07 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 415.463 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-{[(3M)-3-(3-cyclopropyl-1,2,4-oxadiazol-5-yl)-4,5,6,7-tetrahydro-1-benzothiophen-2-yl]carbamoyl}-5,6-dihydro-2H-pyran-3-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7G07 _cell.length_a 33.024 _cell.length_b 54.276 _cell.length_c 75.06 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7G07 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H21 N3 O5 S' _chem_comp.formula_weight 415.463 _chem_comp.id WJH _chem_comp.mon_nstd_flag . _chem_comp.name '4-{[(3M)-3-(3-cyclopropyl-1,2,4-oxadiazol-5-yl)-4,5,6,7-tetrahydro-1-benzothiophen-2-yl]carbamoyl}-5,6-dihydro-2H-pyran-3-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S1 C2 WJH sing 393 n y S1 C13 WJH sing 394 n y C2 C3 WJH doub 395 n y C2 N4 WJH sing 396 n n C3 C9 WJH sing 397 n n C3 C14 WJH sing 398 n y N4 C19 WJH sing 399 n n C5 N6 WJH doub 400 n y C5 N8 WJH sing 401 n y C5 C10 WJH sing 402 n n N6 O7 WJH sing 403 n y O7 C9 WJH sing 404 n y N8 C9 WJH doub 405 n y C10 C11 WJH sing 406 n n C10 C12 WJH sing 407 n n C11 C12 WJH sing 408 n n C13 C14 WJH doub 409 n y C13 C18 WJH sing 410 n n C14 C15 WJH sing 411 n n C15 C16 WJH sing 412 n n C16 C17 WJH sing 413 n n C17 C18 WJH sing 414 n n C19 C20 WJH sing 415 n n C19 O21 WJH doub 416 n n C20 C22 WJH doub 417 n n C20 C26 WJH sing 418 n n C22 C23 WJH sing 419 n n C22 C27 WJH sing 420 n n C23 O24 WJH sing 421 n n O24 C25 WJH sing 422 n n C25 C26 WJH sing 423 n n C27 O28 WJH sing 424 n n C27 O29 WJH doub 425 n n C10 H31 WJH sing 426 n n C11 H32 WJH sing 427 n n C11 H33 WJH sing 428 n n C15 H37 WJH sing 429 n n C15 H36 WJH sing 430 n n C16 H38 WJH sing 431 n n C16 H39 WJH sing 432 n n C17 H40 WJH sing 433 n n C17 H41 WJH sing 434 n n C18 H42 WJH sing 435 n n C18 H43 WJH sing 436 n n C23 H44 WJH sing 437 n n C23 H45 WJH sing 438 n n C25 H47 WJH sing 439 n n C25 H46 WJH sing 440 n n C26 H49 WJH sing 441 n n C26 H48 WJH sing 442 n n N4 H30 WJH sing 443 n n C12 H35 WJH sing 444 n n C12 H34 WJH sing 445 n n O28 H50 WJH sing 446 n n # _atom_sites.entry_id 7G07 _atom_sites.fract_transf_matrix[1][1] 0.030281 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018424 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013323 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 WJH A 1 201 1 WJH L0R . C 3 DMS A 1 202 1 DMS DMS . D 4 FMT A 1 203 1 FMT FMT . E 3 DMS A 1 204 1 DMS DMS . F 5 SO4 A 1 205 1 SO4 SO4 . G 5 SO4 A 1 206 2 SO4 SO4 . H 6 HOH A 1 301 35 HOH HOH . H 6 HOH A 2 302 99 HOH HOH . H 6 HOH A 3 303 27 HOH HOH . H 6 HOH A 4 304 64 HOH HOH . H 6 HOH A 5 305 53 HOH HOH . H 6 HOH A 6 306 56 HOH HOH . H 6 HOH A 7 307 51 HOH HOH . H 6 HOH A 8 308 14 HOH HOH . H 6 HOH A 9 309 73 HOH HOH . H 6 HOH A 10 310 24 HOH HOH . H 6 HOH A 11 311 25 HOH HOH . H 6 HOH A 12 312 90 HOH HOH . H 6 HOH A 13 313 52 HOH HOH . H 6 HOH A 14 314 54 HOH HOH . H 6 HOH A 15 315 17 HOH HOH . H 6 HOH A 16 316 67 HOH HOH . H 6 HOH A 17 317 26 HOH HOH . H 6 HOH A 18 318 39 HOH HOH . H 6 HOH A 19 319 81 HOH HOH . H 6 HOH A 20 320 37 HOH HOH . H 6 HOH A 21 321 30 HOH HOH . H 6 HOH A 22 322 8 HOH HOH . H 6 HOH A 23 323 66 HOH HOH . H 6 HOH A 24 324 74 HOH HOH . H 6 HOH A 25 325 92 HOH HOH . H 6 HOH A 26 326 100 HOH HOH . H 6 HOH A 27 327 33 HOH HOH . H 6 HOH A 28 328 97 HOH HOH . H 6 HOH A 29 329 12 HOH HOH . H 6 HOH A 30 330 41 HOH HOH . H 6 HOH A 31 331 1 HOH HOH . H 6 HOH A 32 332 77 HOH HOH . H 6 HOH A 33 333 18 HOH HOH . H 6 HOH A 34 334 38 HOH HOH . H 6 HOH A 35 335 70 HOH HOH . H 6 HOH A 36 336 62 HOH HOH . H 6 HOH A 37 337 50 HOH HOH . H 6 HOH A 38 338 3 HOH HOH . H 6 HOH A 39 339 23 HOH HOH . H 6 HOH A 40 340 19 HOH HOH . H 6 HOH A 41 341 69 HOH HOH . H 6 HOH A 42 342 22 HOH HOH . H 6 HOH A 43 343 68 HOH HOH . H 6 HOH A 44 344 86 HOH HOH . H 6 HOH A 45 345 20 HOH HOH . H 6 HOH A 46 346 4 HOH HOH . H 6 HOH A 47 347 46 HOH HOH . H 6 HOH A 48 348 16 HOH HOH . H 6 HOH A 49 349 13 HOH HOH . H 6 HOH A 50 350 5 HOH HOH . H 6 HOH A 51 351 2 HOH HOH . H 6 HOH A 52 352 55 HOH HOH . H 6 HOH A 53 353 59 HOH HOH . H 6 HOH A 54 354 7 HOH HOH . H 6 HOH A 55 355 44 HOH HOH . H 6 HOH A 56 356 15 HOH HOH . H 6 HOH A 57 357 71 HOH HOH . H 6 HOH A 58 358 10 HOH HOH . H 6 HOH A 59 359 34 HOH HOH . H 6 HOH A 60 360 60 HOH HOH . H 6 HOH A 61 361 40 HOH HOH . H 6 HOH A 62 362 102 HOH HOH . H 6 HOH A 63 363 84 HOH HOH . H 6 HOH A 64 364 21 HOH HOH . H 6 HOH A 65 365 43 HOH HOH . H 6 HOH A 66 366 11 HOH HOH . H 6 HOH A 67 367 49 HOH HOH . H 6 HOH A 68 368 63 HOH HOH . H 6 HOH A 69 369 58 HOH HOH . H 6 HOH A 70 370 6 HOH HOH . H 6 HOH A 71 371 28 HOH HOH . H 6 HOH A 72 372 47 HOH HOH . H 6 HOH A 73 373 103 HOH HOH . H 6 HOH A 74 374 89 HOH HOH . H 6 HOH A 75 375 57 HOH HOH . H 6 HOH A 76 376 42 HOH HOH . H 6 HOH A 77 377 85 HOH HOH . H 6 HOH A 78 378 105 HOH HOH . H 6 HOH A 79 379 36 HOH HOH . H 6 HOH A 80 380 104 HOH HOH . H 6 HOH A 81 381 32 HOH HOH . H 6 HOH A 82 382 87 HOH HOH . H 6 HOH A 83 383 72 HOH HOH . H 6 HOH A 84 384 48 HOH HOH . H 6 HOH A 85 385 9 HOH HOH . H 6 HOH A 86 386 76 HOH HOH . H 6 HOH A 87 387 61 HOH HOH . H 6 HOH A 88 388 82 HOH HOH . H 6 HOH A 89 389 29 HOH HOH . H 6 HOH A 90 390 65 HOH HOH . H 6 HOH A 91 391 98 HOH HOH . H 6 HOH A 92 392 75 HOH HOH . H 6 HOH A 93 393 96 HOH HOH . H 6 HOH A 94 394 78 HOH HOH . H 6 HOH A 95 395 94 HOH HOH . H 6 HOH A 96 396 31 HOH HOH . H 6 HOH A 97 397 91 HOH HOH . H 6 HOH A 98 398 88 HOH HOH . H 6 HOH A 99 399 83 HOH HOH . H 6 HOH A 100 400 101 HOH HOH . H 6 HOH A 101 401 45 HOH HOH . H 6 HOH A 102 402 79 HOH HOH . H 6 HOH A 103 403 93 HOH HOH . H 6 HOH A 104 404 95 HOH HOH . H 6 HOH A 105 405 80 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 WJH . . . B 2 6.255 7.623 23.796 1 26.39 ? C10 WJH 201 A 1 HETATM 2 C C11 WJH . . . B 2 7.459 6.973 23.171 1 23.61 ? C11 WJH 201 A 1 HETATM 3 C C13 WJH . . . B 2 0.548 5.053 20.222 1 28.57 ? C13 WJH 201 A 1 HETATM 4 C C15 WJH . . . B 2 0.189 5.55 22.674 1 31.89 ? C15 WJH 201 A 1 HETATM 5 C C16 WJH . . . B 2 -1.311 5.549 22.302 1 32.38 ? C16 WJH 201 A 1 HETATM 6 C C17 WJH . . . B 2 -1.71 4.486 21.27 1 31.14 ? C17 WJH 201 A 1 HETATM 7 C C18 WJH . . . B 2 -0.876 4.581 19.954 1 29.92 ? C18 WJH 201 A 1 HETATM 8 C C19 WJH . . . B 2 4.741 5.789 18.345 1 24.93 ? C19 WJH 201 A 1 HETATM 9 C C20 WJH . . . B 2 6.07 6.352 18.115 1 23.33 ? C20 WJH 201 A 1 HETATM 10 C C22 WJH . . . B 2 6.694 6.425 16.922 1 23.88 ? C22 WJH 201 A 1 HETATM 11 C C23 WJH . . . B 2 8.063 7.044 16.701 1 23.95 ? C23 WJH 201 A 1 HETATM 12 C C25 WJH . . . B 2 8.236 7.16 19.111 1 22.82 ? C25 WJH 201 A 1 HETATM 13 C C26 WJH . . . B 2 6.737 6.928 19.361 1 25.61 ? C26 WJH 201 A 1 HETATM 14 C C27 WJH . . . B 2 6.06 5.95 15.698 1 26.12 ? C27 WJH 201 A 1 HETATM 15 S S1 WJH . . . B 2 1.735 5.046 18.94 1 27.78 ? S1 WJH 201 A 1 HETATM 16 C C2 WJH . . . B 2 2.878 5.656 20.05 1 25.84 ? C2 WJH 201 A 1 HETATM 17 C C3 WJH . . . B 2 2.42 5.863 21.323 1 26.83 ? C3 WJH 201 A 1 HETATM 18 N N4 WJH . . . B 2 4.195 5.957 19.635 1 23.44 ? N4 WJH 201 A 1 HETATM 19 C C5 WJH . . . B 2 4.9 7.095 23.472 1 26.57 ? C5 WJH 201 A 1 HETATM 20 N N6 WJH . . . B 2 3.932 6.982 24.35 1 29.48 ? N6 WJH 201 A 1 HETATM 21 O O7 WJH . . . B 2 2.862 6.493 23.646 1 25.86 ? O7 WJH 201 A 1 HETATM 22 N N8 WJH . . . B 2 4.567 6.727 22.197 1 24.99 ? N8 WJH 201 A 1 HETATM 23 C C9 WJH . . . B 2 3.319 6.363 22.35 1 24.81 ? C9 WJH 201 A 1 HETATM 24 C C12 WJH . . . B 2 6.985 8.338 22.69 1 25.94 ? C12 WJH 201 A 1 HETATM 25 C C14 WJH . . . B 2 1.046 5.489 21.427 1 27.16 ? C14 WJH 201 A 1 HETATM 26 O O21 WJH . . . B 2 4.083 5.163 17.473 1 22.66 ? O21 WJH 201 A 1 HETATM 27 O O24 WJH . . . B 2 8.542 7.798 17.832 1 26.74 ? O24 WJH 201 A 1 HETATM 28 O O28 WJH . . . B 2 6.3 4.694 15.246 1 24.72 ? O28 WJH 201 A 1 HETATM 29 O O29 WJH . . . B 2 5.277 6.683 15.092 1 26.42 ? O29 WJH 201 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 29 #