data_7G1M # _model_server_result.job_id x_24FtSKZfTzSGi-9bhCJg _model_server_result.datetime_utc '2024-11-12 20:19:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7g1m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7G1M # _exptl.entry_id 7G1M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 389.469 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(1R,2S)-2-{[(3M)-3-(3-methyl-1,2,4-oxadiazol-5-yl)-4,5,6,7-tetrahydro-1-benzothiophen-2-yl]carbamoyl}cyclohexane-1-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7G1M _cell.length_a 32.015 _cell.length_b 52.942 _cell.length_c 72.164 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7G1M _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 2 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H23 N3 O4 S' _chem_comp.formula_weight 389.469 _chem_comp.id WOU _chem_comp.mon_nstd_flag . _chem_comp.name '(1R,2S)-2-{[(3M)-3-(3-methyl-1,2,4-oxadiazol-5-yl)-4,5,6,7-tetrahydro-1-benzothiophen-2-yl]carbamoyl}cyclohexane-1-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 WOU doub 376 n y C1 S5 WOU sing 377 n y C1 N11 WOU sing 378 n n C2 C3 WOU sing 379 n y C2 C10 WOU sing 380 n n C3 C4 WOU doub 381 n y C3 C9 WOU sing 382 n n C4 S5 WOU sing 383 n y C4 C8 WOU sing 384 n n C6 C7 WOU sing 385 n n C6 C9 WOU sing 386 n n C7 C8 WOU sing 387 n n C10 N23 WOU doub 388 n y C10 O26 WOU sing 389 n y N11 C12 WOU sing 390 n n C12 O13 WOU doub 391 n n C12 C14 WOU sing 392 n n C14 C15 WOU sing 393 n n C14 C19 WOU sing 394 n n C15 C16 WOU sing 395 n n C15 C20 WOU sing 396 n n C16 C17 WOU sing 397 n n C17 C18 WOU sing 398 n n C18 C19 WOU sing 399 n n C20 O21 WOU doub 400 n n C20 O22 WOU sing 401 n n N23 C24 WOU sing 402 n y C24 N25 WOU doub 403 n y C24 C27 WOU sing 404 n n N25 O26 WOU sing 405 n y C15 H1 WOU sing 406 n n C16 H2 WOU sing 407 n n C16 H3 WOU sing 408 n n C17 H4 WOU sing 409 n n C17 H5 WOU sing 410 n n C18 H6 WOU sing 411 n n C18 H7 WOU sing 412 n n C19 H8 WOU sing 413 n n C19 H9 WOU sing 414 n n C27 H10 WOU sing 415 n n C27 H11 WOU sing 416 n n C27 H12 WOU sing 417 n n C6 H13 WOU sing 418 n n C6 H14 WOU sing 419 n n C7 H15 WOU sing 420 n n C7 H16 WOU sing 421 n n C8 H17 WOU sing 422 n n C8 H18 WOU sing 423 n n C9 H19 WOU sing 424 n n C9 H20 WOU sing 425 n n N11 H21 WOU sing 426 n n C14 H22 WOU sing 427 n n O22 H23 WOU sing 428 n n # _atom_sites.entry_id 7G1M _atom_sites.fract_transf_matrix[1][1] 0.031235 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018889 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013857 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 WOU A 1 201 1 WOU L0R . C 3 HOH A 1 301 141 HOH HOH . C 3 HOH A 2 302 115 HOH HOH . C 3 HOH A 3 303 94 HOH HOH . C 3 HOH A 4 304 139 HOH HOH . C 3 HOH A 5 305 121 HOH HOH . C 3 HOH A 6 306 136 HOH HOH . C 3 HOH A 7 307 112 HOH HOH . C 3 HOH A 8 308 117 HOH HOH . C 3 HOH A 9 309 46 HOH HOH . C 3 HOH A 10 310 89 HOH HOH . C 3 HOH A 11 311 39 HOH HOH . C 3 HOH A 12 312 125 HOH HOH . C 3 HOH A 13 313 99 HOH HOH . C 3 HOH A 14 314 91 HOH HOH . C 3 HOH A 15 315 65 HOH HOH . C 3 HOH A 16 316 55 HOH HOH . C 3 HOH A 17 317 24 HOH HOH . C 3 HOH A 18 318 170 HOH HOH . C 3 HOH A 19 319 164 HOH HOH . C 3 HOH A 20 320 150 HOH HOH . C 3 HOH A 21 321 21 HOH HOH . C 3 HOH A 22 322 123 HOH HOH . C 3 HOH A 23 323 32 HOH HOH . C 3 HOH A 24 324 92 HOH HOH . C 3 HOH A 25 325 56 HOH HOH . C 3 HOH A 26 326 138 HOH HOH . C 3 HOH A 27 327 72 HOH HOH . C 3 HOH A 28 328 23 HOH HOH . C 3 HOH A 29 329 130 HOH HOH . C 3 HOH A 30 330 124 HOH HOH . C 3 HOH A 31 331 62 HOH HOH . C 3 HOH A 32 332 76 HOH HOH . C 3 HOH A 33 333 28 HOH HOH . C 3 HOH A 34 334 133 HOH HOH . C 3 HOH A 35 335 59 HOH HOH . C 3 HOH A 36 336 84 HOH HOH . C 3 HOH A 37 337 107 HOH HOH . C 3 HOH A 38 338 9 HOH HOH . C 3 HOH A 39 339 71 HOH HOH . C 3 HOH A 40 340 77 HOH HOH . C 3 HOH A 41 341 60 HOH HOH . C 3 HOH A 42 342 69 HOH HOH . C 3 HOH A 43 343 19 HOH HOH . C 3 HOH A 44 344 54 HOH HOH . C 3 HOH A 45 345 85 HOH HOH . C 3 HOH A 46 346 63 HOH HOH . C 3 HOH A 47 347 100 HOH HOH . C 3 HOH A 48 348 149 HOH HOH . C 3 HOH A 49 349 6 HOH HOH . C 3 HOH A 50 350 33 HOH HOH . C 3 HOH A 51 351 45 HOH HOH . C 3 HOH A 52 352 95 HOH HOH . C 3 HOH A 53 353 44 HOH HOH . C 3 HOH A 54 354 20 HOH HOH . C 3 HOH A 55 355 173 HOH HOH . C 3 HOH A 56 356 22 HOH HOH . C 3 HOH A 57 357 79 HOH HOH . C 3 HOH A 58 358 169 HOH HOH . C 3 HOH A 59 359 81 HOH HOH . C 3 HOH A 60 360 105 HOH HOH . C 3 HOH A 61 361 34 HOH HOH . C 3 HOH A 62 362 114 HOH HOH . C 3 HOH A 63 363 109 HOH HOH . C 3 HOH A 64 364 40 HOH HOH . C 3 HOH A 65 365 1 HOH HOH . C 3 HOH A 66 366 110 HOH HOH . C 3 HOH A 67 367 122 HOH HOH . C 3 HOH A 68 368 4 HOH HOH . C 3 HOH A 69 369 8 HOH HOH . C 3 HOH A 70 370 16 HOH HOH . C 3 HOH A 71 371 96 HOH HOH . C 3 HOH A 72 372 171 HOH HOH . C 3 HOH A 73 373 15 HOH HOH . C 3 HOH A 74 374 51 HOH HOH . C 3 HOH A 75 375 52 HOH HOH . C 3 HOH A 76 376 167 HOH HOH . C 3 HOH A 77 377 3 HOH HOH . C 3 HOH A 78 378 48 HOH HOH . C 3 HOH A 79 379 58 HOH HOH . C 3 HOH A 80 380 151 HOH HOH . C 3 HOH A 81 381 88 HOH HOH . C 3 HOH A 82 382 35 HOH HOH . C 3 HOH A 83 383 5 HOH HOH . C 3 HOH A 84 384 61 HOH HOH . C 3 HOH A 85 385 36 HOH HOH . C 3 HOH A 86 386 66 HOH HOH . C 3 HOH A 87 387 82 HOH HOH . C 3 HOH A 88 388 70 HOH HOH . C 3 HOH A 89 389 26 HOH HOH . C 3 HOH A 90 390 25 HOH HOH . C 3 HOH A 91 391 118 HOH HOH . C 3 HOH A 92 392 7 HOH HOH . C 3 HOH A 93 393 93 HOH HOH . C 3 HOH A 94 394 168 HOH HOH . C 3 HOH A 95 395 162 HOH HOH . C 3 HOH A 96 396 148 HOH HOH . C 3 HOH A 97 397 11 HOH HOH . C 3 HOH A 98 398 120 HOH HOH . C 3 HOH A 99 399 10 HOH HOH . C 3 HOH A 100 400 2 HOH HOH . C 3 HOH A 101 401 53 HOH HOH . C 3 HOH A 102 402 108 HOH HOH . C 3 HOH A 103 403 101 HOH HOH . C 3 HOH A 104 404 98 HOH HOH . C 3 HOH A 105 405 134 HOH HOH . C 3 HOH A 106 406 27 HOH HOH . C 3 HOH A 107 407 43 HOH HOH . C 3 HOH A 108 408 50 HOH HOH . C 3 HOH A 109 409 37 HOH HOH . C 3 HOH A 110 410 106 HOH HOH . C 3 HOH A 111 411 163 HOH HOH . C 3 HOH A 112 412 41 HOH HOH . C 3 HOH A 113 413 143 HOH HOH . C 3 HOH A 114 414 158 HOH HOH . C 3 HOH A 115 415 47 HOH HOH . C 3 HOH A 116 416 13 HOH HOH . C 3 HOH A 117 417 67 HOH HOH . C 3 HOH A 118 418 30 HOH HOH . C 3 HOH A 119 419 74 HOH HOH . C 3 HOH A 120 420 42 HOH HOH . C 3 HOH A 121 421 86 HOH HOH . C 3 HOH A 122 422 119 HOH HOH . C 3 HOH A 123 423 12 HOH HOH . C 3 HOH A 124 424 17 HOH HOH . C 3 HOH A 125 425 73 HOH HOH . C 3 HOH A 126 426 78 HOH HOH . C 3 HOH A 127 427 137 HOH HOH . C 3 HOH A 128 428 83 HOH HOH . C 3 HOH A 129 429 147 HOH HOH . C 3 HOH A 130 430 90 HOH HOH . C 3 HOH A 131 431 116 HOH HOH . C 3 HOH A 132 432 131 HOH HOH . C 3 HOH A 133 433 80 HOH HOH . C 3 HOH A 134 434 49 HOH HOH . C 3 HOH A 135 435 166 HOH HOH . C 3 HOH A 136 436 97 HOH HOH . C 3 HOH A 137 437 129 HOH HOH . C 3 HOH A 138 438 64 HOH HOH . C 3 HOH A 139 439 29 HOH HOH . C 3 HOH A 140 440 135 HOH HOH . C 3 HOH A 141 441 126 HOH HOH . C 3 HOH A 142 442 103 HOH HOH . C 3 HOH A 143 443 104 HOH HOH . C 3 HOH A 144 444 132 HOH HOH . C 3 HOH A 145 445 157 HOH HOH . C 3 HOH A 146 446 152 HOH HOH . C 3 HOH A 147 447 113 HOH HOH . C 3 HOH A 148 448 145 HOH HOH . C 3 HOH A 149 449 75 HOH HOH . C 3 HOH A 150 450 87 HOH HOH . C 3 HOH A 151 451 102 HOH HOH . C 3 HOH A 152 452 111 HOH HOH . C 3 HOH A 153 453 18 HOH HOH . C 3 HOH A 154 454 154 HOH HOH . C 3 HOH A 155 455 14 HOH HOH . C 3 HOH A 156 456 128 HOH HOH . C 3 HOH A 157 457 156 HOH HOH . C 3 HOH A 158 458 159 HOH HOH . C 3 HOH A 159 459 160 HOH HOH . C 3 HOH A 160 460 174 HOH HOH . C 3 HOH A 161 461 165 HOH HOH . C 3 HOH A 162 462 57 HOH HOH . C 3 HOH A 163 463 153 HOH HOH . C 3 HOH A 164 464 127 HOH HOH . C 3 HOH A 165 465 38 HOH HOH . C 3 HOH A 166 466 140 HOH HOH . C 3 HOH A 167 467 172 HOH HOH . C 3 HOH A 168 468 161 HOH HOH . C 3 HOH A 169 469 146 HOH HOH . C 3 HOH A 170 470 68 HOH HOH . C 3 HOH A 171 471 142 HOH HOH . C 3 HOH A 172 472 31 HOH HOH . C 3 HOH A 173 473 155 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 WOU . . . B 2 15.701 -4.622 -23.692 1 22.72 ? C10 WOU 201 A 1 HETATM 2 C C15 WOU . . . B 2 12.189 -6.023 -18.422 1 24.75 ? C15 WOU 201 A 1 HETATM 3 C C16 WOU . . . B 2 11.988 -7.269 -19.312 1 25.33 ? C16 WOU 201 A 1 HETATM 4 C C17 WOU . . . B 2 11.018 -6.822 -20.434 1 26.75 ? C17 WOU 201 A 1 HETATM 5 C C18 WOU . . . B 2 11.589 -5.678 -21.288 1 26.78 ? C18 WOU 201 A 1 HETATM 6 C C19 WOU . . . B 2 12.034 -4.489 -20.429 1 26.39 ? C19 WOU 201 A 1 HETATM 7 C C20 WOU . . . B 2 12.837 -6.301 -17.089 1 22.32 ? C20 WOU 201 A 1 HETATM 8 C C24 WOU . . . B 2 13.943 -4.638 -24.844 1 32.48 ? C24 WOU 201 A 1 HETATM 9 C C27 WOU . . . B 2 12.459 -4.687 -25.124 1 31.08 ? C27 WOU 201 A 1 HETATM 10 C C1 WOU . . . B 2 16.202 -4.945 -21.309 1 20.67 ? C1 WOU 201 A 1 HETATM 11 C C2 WOU . . . B 2 16.636 -4.692 -22.596 1 19.76 ? C2 WOU 201 A 1 HETATM 12 C C3 WOU . . . B 2 18.061 -4.603 -22.657 1 21 ? C3 WOU 201 A 1 HETATM 13 C C4 WOU . . . B 2 18.655 -4.768 -21.433 1 23.9 ? C4 WOU 201 A 1 HETATM 14 S S5 WOU . . . B 2 17.498 -5.068 -20.163 1 25.21 ? S5 WOU 201 A 1 HETATM 15 C C6 WOU . . . B 2 20.275 -3.861 -23.559 1 24.15 ? C6 WOU 201 A 1 HETATM 16 C C7 WOU . . . B 2 20.918 -4.763 -22.486 1 28.47 ? C7 WOU 201 A 1 HETATM 17 C C8 WOU . . . B 2 20.134 -4.71 -21.163 1 27.62 ? C8 WOU 201 A 1 HETATM 18 C C9 WOU . . . B 2 18.866 -4.354 -23.909 1 23.44 ? C9 WOU 201 A 1 HETATM 19 N N11 WOU . . . B 2 14.807 -5.077 -20.958 1 23.21 ? N11 WOU 201 A 1 HETATM 20 C C12 WOU . . . B 2 14.35 -5.285 -19.624 1 21.13 ? C12 WOU 201 A 1 HETATM 21 O O13 WOU . . . B 2 15.16 -5.732 -18.804 1 27.4 ? O13 WOU 201 A 1 HETATM 22 C C14 WOU . . . B 2 12.909 -4.93 -19.248 1 25.34 ? C14 WOU 201 A 1 HETATM 23 O O21 WOU . . . B 2 13.283 -7.469 -16.832 1 22.03 -1 O21 WOU 201 A 1 HETATM 24 O O22 WOU . . . B 2 12.929 -5.348 -16.234 1 28.59 ? O22 WOU 201 A 1 HETATM 25 N N23 WOU . . . B 2 14.414 -4.685 -23.575 1 27.66 ? N23 WOU 201 A 1 HETATM 26 N N25 WOU . . . B 2 14.911 -4.558 -25.724 1 35.39 ? N25 WOU 201 A 1 HETATM 27 O O26 WOU . . . B 2 16.111 -4.565 -25 1 27.19 ? O26 WOU 201 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 27 #