data_7G20 # _model_server_result.job_id gRQ0t_pBRdChjVuZsD6Kjw _model_server_result.datetime_utc '2024-12-23 06:28:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7g20 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7G20 # _exptl.entry_id 7G20 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 330.378 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (5S)-1-[(4-methoxyphenyl)methyl]-5-(propan-2-yl)-5-(prop-2-en-1-yl)-1,3-diazinane-2,4,6-trione _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7G20 _cell.length_a 32.628 _cell.length_b 53.936 _cell.length_c 75.312 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7G20 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C18 H22 N2 O4' _chem_comp.formula_weight 330.378 _chem_comp.id WQL _chem_comp.mon_nstd_flag . _chem_comp.name (5S)-1-[(4-methoxyphenyl)methyl]-5-(propan-2-yl)-5-(prop-2-en-1-yl)-1,3-diazinane-2,4,6-trione _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 WQL sing 393 n n C1 C3 WQL sing 394 n n C1 C4 WQL sing 395 n n C1 C5 WQL sing 396 n n C2 N6 WQL sing 397 n n C2 O7 WQL doub 398 n n C3 N8 WQL sing 399 n n C3 O9 WQL doub 400 n n C4 C10 WQL sing 401 n n C5 C11 WQL sing 402 n n C5 C12 WQL sing 403 n n N6 C13 WQL sing 404 n n N6 C14 WQL sing 405 n n N8 C14 WQL sing 406 n n C10 C15 WQL doub 407 n n C13 C16 WQL sing 408 n n C14 O17 WQL doub 409 n n C16 C18 WQL doub 410 n y C16 C19 WQL sing 411 n y C18 C20 WQL sing 412 n y C19 C21 WQL doub 413 n y C20 C22 WQL doub 414 n y C21 C22 WQL sing 415 n y C22 O23 WQL sing 416 n n O23 C24 WQL sing 417 n n C10 H29 WQL sing 418 n n C11 H30 WQL sing 419 n n C11 H31 WQL sing 420 n n C11 H32 WQL sing 421 n n C13 H36 WQL sing 422 n n C13 H37 WQL sing 423 n n C15 H38 WQL sing 424 n n C15 H39 WQL sing 425 n n C18 H40 WQL sing 426 n n C19 H41 WQL sing 427 n n C20 H42 WQL sing 428 n n C21 H43 WQL sing 429 n n C24 H46 WQL sing 430 n n C24 H44 WQL sing 431 n n C24 H45 WQL sing 432 n n C4 H26 WQL sing 433 n n C4 H25 WQL sing 434 n n C5 H27 WQL sing 435 n n N8 H28 WQL sing 436 n n C12 H34 WQL sing 437 n n C12 H33 WQL sing 438 n n C12 H35 WQL sing 439 n n # _atom_sites.entry_id 7G20 _atom_sites.fract_transf_matrix[1][1] 0.030649 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01854 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013278 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 WQL A 1 201 1 WQL L0R . C 3 SO4 A 1 202 1 SO4 SO4 . D 4 FMT A 1 203 1 FMT FMT . E 5 EDO A 1 204 1 EDO EDO . F 3 SO4 A 1 205 3 SO4 SO4 . G 6 HOH A 1 301 127 HOH HOH . G 6 HOH A 2 302 169 HOH HOH . G 6 HOH A 3 303 25 HOH HOH . G 6 HOH A 4 304 65 HOH HOH . G 6 HOH A 5 305 72 HOH HOH . G 6 HOH A 6 306 60 HOH HOH . G 6 HOH A 7 307 67 HOH HOH . G 6 HOH A 8 308 135 HOH HOH . G 6 HOH A 9 309 44 HOH HOH . G 6 HOH A 10 310 49 HOH HOH . G 6 HOH A 11 311 51 HOH HOH . G 6 HOH A 12 312 144 HOH HOH . G 6 HOH A 13 313 30 HOH HOH . G 6 HOH A 14 314 173 HOH HOH . G 6 HOH A 15 315 63 HOH HOH . G 6 HOH A 16 316 33 HOH HOH . G 6 HOH A 17 317 50 HOH HOH . G 6 HOH A 18 318 108 HOH HOH . G 6 HOH A 19 319 157 HOH HOH . G 6 HOH A 20 320 134 HOH HOH . G 6 HOH A 21 321 17 HOH HOH . G 6 HOH A 22 322 109 HOH HOH . G 6 HOH A 23 323 81 HOH HOH . G 6 HOH A 24 324 68 HOH HOH . G 6 HOH A 25 325 141 HOH HOH . G 6 HOH A 26 326 111 HOH HOH . G 6 HOH A 27 327 148 HOH HOH . G 6 HOH A 28 328 41 HOH HOH . G 6 HOH A 29 329 107 HOH HOH . G 6 HOH A 30 330 153 HOH HOH . G 6 HOH A 31 331 7 HOH HOH . G 6 HOH A 32 332 136 HOH HOH . G 6 HOH A 33 333 46 HOH HOH . G 6 HOH A 34 334 12 HOH HOH . G 6 HOH A 35 335 113 HOH HOH . G 6 HOH A 36 336 103 HOH HOH . G 6 HOH A 37 337 163 HOH HOH . G 6 HOH A 38 338 18 HOH HOH . G 6 HOH A 39 339 98 HOH HOH . G 6 HOH A 40 340 70 HOH HOH . G 6 HOH A 41 341 56 HOH HOH . G 6 HOH A 42 342 59 HOH HOH . G 6 HOH A 43 343 78 HOH HOH . G 6 HOH A 44 344 31 HOH HOH . G 6 HOH A 45 345 71 HOH HOH . G 6 HOH A 46 346 15 HOH HOH . G 6 HOH A 47 347 10 HOH HOH . G 6 HOH A 48 348 8 HOH HOH . G 6 HOH A 49 349 120 HOH HOH . G 6 HOH A 50 350 172 HOH HOH . G 6 HOH A 51 351 5 HOH HOH . G 6 HOH A 52 352 14 HOH HOH . G 6 HOH A 53 353 62 HOH HOH . G 6 HOH A 54 354 89 HOH HOH . G 6 HOH A 55 355 4 HOH HOH . G 6 HOH A 56 356 23 HOH HOH . G 6 HOH A 57 357 129 HOH HOH . G 6 HOH A 58 358 34 HOH HOH . G 6 HOH A 59 359 90 HOH HOH . G 6 HOH A 60 360 73 HOH HOH . G 6 HOH A 61 361 149 HOH HOH . G 6 HOH A 62 362 3 HOH HOH . G 6 HOH A 63 363 55 HOH HOH . G 6 HOH A 64 364 32 HOH HOH . G 6 HOH A 65 365 21 HOH HOH . G 6 HOH A 66 366 9 HOH HOH . G 6 HOH A 67 367 66 HOH HOH . G 6 HOH A 68 368 57 HOH HOH . G 6 HOH A 69 369 1 HOH HOH . G 6 HOH A 70 370 36 HOH HOH . G 6 HOH A 71 371 91 HOH HOH . G 6 HOH A 72 372 79 HOH HOH . G 6 HOH A 73 373 76 HOH HOH . G 6 HOH A 74 374 35 HOH HOH . G 6 HOH A 75 375 80 HOH HOH . G 6 HOH A 76 376 40 HOH HOH . G 6 HOH A 77 377 13 HOH HOH . G 6 HOH A 78 378 122 HOH HOH . G 6 HOH A 79 379 43 HOH HOH . G 6 HOH A 80 380 87 HOH HOH . G 6 HOH A 81 381 124 HOH HOH . G 6 HOH A 82 382 155 HOH HOH . G 6 HOH A 83 383 112 HOH HOH . G 6 HOH A 84 384 97 HOH HOH . G 6 HOH A 85 385 151 HOH HOH . G 6 HOH A 86 386 19 HOH HOH . G 6 HOH A 87 387 11 HOH HOH . G 6 HOH A 88 388 24 HOH HOH . G 6 HOH A 89 389 26 HOH HOH . G 6 HOH A 90 390 28 HOH HOH . G 6 HOH A 91 391 99 HOH HOH . G 6 HOH A 92 392 75 HOH HOH . G 6 HOH A 93 393 16 HOH HOH . G 6 HOH A 94 394 37 HOH HOH . G 6 HOH A 95 395 53 HOH HOH . G 6 HOH A 96 396 20 HOH HOH . G 6 HOH A 97 397 84 HOH HOH . G 6 HOH A 98 398 158 HOH HOH . G 6 HOH A 99 399 2 HOH HOH . G 6 HOH A 100 400 170 HOH HOH . G 6 HOH A 101 401 6 HOH HOH . G 6 HOH A 102 402 96 HOH HOH . G 6 HOH A 103 403 102 HOH HOH . G 6 HOH A 104 404 85 HOH HOH . G 6 HOH A 105 405 118 HOH HOH . G 6 HOH A 106 406 47 HOH HOH . G 6 HOH A 107 407 105 HOH HOH . G 6 HOH A 108 408 166 HOH HOH . G 6 HOH A 109 409 168 HOH HOH . G 6 HOH A 110 410 42 HOH HOH . G 6 HOH A 111 411 39 HOH HOH . G 6 HOH A 112 412 77 HOH HOH . G 6 HOH A 113 413 150 HOH HOH . G 6 HOH A 114 414 58 HOH HOH . G 6 HOH A 115 415 22 HOH HOH . G 6 HOH A 116 416 83 HOH HOH . G 6 HOH A 117 417 45 HOH HOH . G 6 HOH A 118 418 128 HOH HOH . G 6 HOH A 119 419 29 HOH HOH . G 6 HOH A 120 420 171 HOH HOH . G 6 HOH A 121 421 106 HOH HOH . G 6 HOH A 122 422 54 HOH HOH . G 6 HOH A 123 423 69 HOH HOH . G 6 HOH A 124 424 116 HOH HOH . G 6 HOH A 125 425 27 HOH HOH . G 6 HOH A 126 426 95 HOH HOH . G 6 HOH A 127 427 88 HOH HOH . G 6 HOH A 128 428 133 HOH HOH . G 6 HOH A 129 429 74 HOH HOH . G 6 HOH A 130 430 126 HOH HOH . G 6 HOH A 131 431 64 HOH HOH . G 6 HOH A 132 432 52 HOH HOH . G 6 HOH A 133 433 167 HOH HOH . G 6 HOH A 134 434 142 HOH HOH . G 6 HOH A 135 435 165 HOH HOH . G 6 HOH A 136 436 110 HOH HOH . G 6 HOH A 137 437 161 HOH HOH . G 6 HOH A 138 438 94 HOH HOH . G 6 HOH A 139 439 130 HOH HOH . G 6 HOH A 140 440 159 HOH HOH . G 6 HOH A 141 441 162 HOH HOH . G 6 HOH A 142 442 121 HOH HOH . G 6 HOH A 143 443 143 HOH HOH . G 6 HOH A 144 444 114 HOH HOH . G 6 HOH A 145 445 38 HOH HOH . G 6 HOH A 146 446 131 HOH HOH . G 6 HOH A 147 447 132 HOH HOH . G 6 HOH A 148 448 139 HOH HOH . G 6 HOH A 149 449 140 HOH HOH . G 6 HOH A 150 450 123 HOH HOH . G 6 HOH A 151 451 101 HOH HOH . G 6 HOH A 152 452 48 HOH HOH . G 6 HOH A 153 453 137 HOH HOH . G 6 HOH A 154 454 117 HOH HOH . G 6 HOH A 155 455 154 HOH HOH . G 6 HOH A 156 456 82 HOH HOH . G 6 HOH A 157 457 92 HOH HOH . G 6 HOH A 158 458 93 HOH HOH . G 6 HOH A 159 459 147 HOH HOH . G 6 HOH A 160 460 115 HOH HOH . G 6 HOH A 161 461 146 HOH HOH . G 6 HOH A 162 462 86 HOH HOH . G 6 HOH A 163 463 138 HOH HOH . G 6 HOH A 164 464 152 HOH HOH . G 6 HOH A 165 465 156 HOH HOH . G 6 HOH A 166 466 145 HOH HOH . G 6 HOH A 167 467 164 HOH HOH . G 6 HOH A 168 468 100 HOH HOH . G 6 HOH A 169 469 104 HOH HOH . G 6 HOH A 170 470 160 HOH HOH . G 6 HOH A 171 471 125 HOH HOH . G 6 HOH A 172 472 119 HOH HOH . G 6 HOH A 173 473 61 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 WQL . . . B 2 4.106 7.377 14.532 1 23.22 ? C10 WQL 201 A 1 HETATM 2 C C11 WQL . . . B 2 8.029 8.311 17.047 1 27.71 ? C11 WQL 201 A 1 HETATM 3 C C13 WQL . . . B 2 3.495 7.249 19.152 1 14.92 ? C13 WQL 201 A 1 HETATM 4 C C15 WQL . . . B 2 3.138 6.6 13.795 1 23.63 ? C15 WQL 201 A 1 HETATM 5 C C16 WQL . . . B 2 4.219 7.165 20.489 1 15.66 ? C16 WQL 201 A 1 HETATM 6 C C18 WQL . . . B 2 5.331 7.979 20.729 1 15.26 ? C18 WQL 201 A 1 HETATM 7 C C19 WQL . . . B 2 3.72 6.288 21.503 1 15.06 ? C19 WQL 201 A 1 HETATM 8 C C20 WQL . . . B 2 6.008 7.908 21.99 1 16.12 ? C20 WQL 201 A 1 HETATM 9 C C21 WQL . . . B 2 4.374 6.269 22.744 1 14.99 ? C21 WQL 201 A 1 HETATM 10 C C22 WQL . . . B 2 5.518 7.035 22.979 1 13.74 ? C22 WQL 201 A 1 HETATM 11 C C24 WQL . . . B 2 7.405 7.558 24.362 1 15.17 ? C24 WQL 201 A 1 HETATM 12 C C1 WQL . . . B 2 6.029 6.892 16.202 1 19.06 ? C1 WQL 201 A 1 HETATM 13 C C2 WQL . . . B 2 5.152 7.586 17.245 1 16.91 ? C2 WQL 201 A 1 HETATM 14 C C3 WQL . . . B 2 5.85 5.453 16.078 1 16.73 ? C3 WQL 201 A 1 HETATM 15 C C4 WQL . . . B 2 5.608 7.239 14.807 1 21.04 ? C4 WQL 201 A 1 HETATM 16 C C5 WQL . . . B 2 7.497 6.982 16.736 1 21.9 ? C5 WQL 201 A 1 HETATM 17 N N6 WQL . . . B 2 4.319 6.753 18.062 1 15.4 ? N6 WQL 201 A 1 HETATM 18 O O7 WQL . . . B 2 5.195 8.794 17.485 1 19.79 ? O7 WQL 201 A 1 HETATM 19 N N8 WQL . . . B 2 4.975 4.744 16.925 1 17.37 ? N8 WQL 201 A 1 HETATM 20 O O9 WQL . . . B 2 6.34 4.741 15.292 1 17.8 ? O9 WQL 201 A 1 HETATM 21 C C12 WQL . . . B 2 7.633 6.268 18.118 1 25.47 ? C12 WQL 201 A 1 HETATM 22 C C14 WQL . . . B 2 4.245 5.34 17.889 1 15.32 ? C14 WQL 201 A 1 HETATM 23 O O17 WQL . . . B 2 3.491 4.677 18.615 1 18.24 ? O17 WQL 201 A 1 HETATM 24 O O23 WQL . . . B 2 6.13 6.914 24.198 1 15.88 ? O23 WQL 201 A 1 HETATM 25 H H29 WQL . . . B 2 3.707 8.19 14.926 1 22.9 ? H29 WQL 201 A 1 HETATM 26 H H30 WQL . . . B 2 7.768 8.954 16.357 1 23.56 ? H30 WQL 201 A 1 HETATM 27 H H31 WQL . . . B 2 8.996 8.26 17.077 1 20.41 ? H31 WQL 201 A 1 HETATM 28 H H32 WQL . . . B 2 7.701 8.623 17.922 1 24.06 ? H32 WQL 201 A 1 HETATM 29 H H36 WQL . . . B 2 2.658 6.747 19.204 1 16.51 ? H36 WQL 201 A 1 HETATM 30 H H37 WQL . . . B 2 3.272 8.17 18.996 1 16.64 ? H37 WQL 201 A 1 HETATM 31 H H38 WQL . . . B 2 2.791 5.775 14.197 1 18.49 ? H38 WQL 201 A 1 HETATM 32 H H39 WQL . . . B 2 2.678 6.997 13.028 1 23.7 ? H39 WQL 201 A 1 HETATM 33 H H40 WQL . . . B 2 5.659 8.554 20.047 1 15.64 ? H40 WQL 201 A 1 HETATM 34 H H41 WQL . . . B 2 2.939 5.75 21.35 1 15.81 ? H41 WQL 201 A 1 HETATM 35 H H42 WQL . . . B 2 6.774 8.446 22.136 1 15.09 ? H42 WQL 201 A 1 HETATM 36 H H43 WQL . . . B 2 4.064 5.648 23.438 1 15.43 ? H43 WQL 201 A 1 HETATM 37 H H46 WQL . . . B 2 7.791 7.291 25.236 1 14.8 ? H46 WQL 201 A 1 HETATM 38 H H44 WQL . . . B 2 7.293 8.527 24.348 1 14.6 ? H44 WQL 201 A 1 HETATM 39 H H45 WQL . . . B 2 8.009 7.285 23.66 1 15.12 ? H45 WQL 201 A 1 HETATM 40 H H26 WQL . . . B 2 5.983 6.612 14.153 1 18.16 ? H26 WQL 201 A 1 HETATM 41 H H25 WQL . . . B 2 5.999 8.105 14.613 1 21.41 ? H25 WQL 201 A 1 HETATM 42 H H27 WQL . . . B 2 8.103 6.553 16.115 1 19.97 ? H27 WQL 201 A 1 HETATM 43 H H28 WQL . . . B 2 4.9 3.852 16.811 1 14.74 ? H28 WQL 201 A 1 HETATM 44 H H34 WQL . . . B 2 6.898 6.481 18.705 1 22.26 ? H34 WQL 201 A 1 HETATM 45 H H33 WQL . . . B 2 8.471 6.549 18.557 1 21.87 ? H33 WQL 201 A 1 HETATM 46 H H35 WQL . . . B 2 7.668 5.301 17.986 1 23.24 ? H35 WQL 201 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 561 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 46 #