data_7G99 # _model_server_result.job_id dtaYkmUdmlcXia-zfR5xhA _model_server_result.datetime_utc '2024-10-11 06:22:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7g99 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":502}' # _entry.id 7G99 # _exptl.entry_id 7G99 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7G99 _cell.length_a 70.926 _cell.length_b 70.926 _cell.length_c 195.874 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7G99 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 N N N ? 4 O N N ? 4 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 21 A CYS 20 1_555 C C19 ZE9 . A ZE9 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.87 ? covale ? covale2 B SG CYS 132 B CYS 335 1_555 M C19 ZE9 . B ZE9 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.863 ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7G99 _atom_sites.fract_transf_matrix[1][1] 0.014099 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014099 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005105 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZE9 A 1 201 201 ZE9 LIG . D 4 DMS A 1 202 1 DMS DMS . E 4 DMS A 1 203 6 DMS DMS . F 4 DMS A 1 204 7 DMS DMS . G 5 FMT A 1 205 1 FMT FMT . H 5 FMT A 1 206 4 FMT FMT . I 5 FMT A 1 207 5 FMT FMT . J 5 FMT A 1 208 10 FMT FMT . K 5 FMT A 1 209 12 FMT FMT . L 5 FMT A 1 210 13 FMT FMT . M 3 ZE9 B 1 501 501 ZE9 LIG . N 4 DMS B 1 502 2 DMS DMS . O 4 DMS B 1 503 3 DMS DMS . P 4 DMS B 1 504 5 DMS DMS . Q 5 FMT B 1 505 2 FMT FMT . R 5 FMT B 1 506 3 FMT FMT . S 5 FMT B 1 507 7 FMT FMT . T 5 FMT B 1 508 8 FMT FMT . U 5 FMT B 1 509 11 FMT FMT . V 5 FMT B 1 510 14 FMT FMT . W 5 FMT B 1 511 15 FMT FMT . X 6 HOH A 1 301 144 HOH HOH . X 6 HOH A 2 302 267 HOH HOH . X 6 HOH A 3 303 228 HOH HOH . X 6 HOH A 4 304 26 HOH HOH . X 6 HOH A 5 305 9 HOH HOH . X 6 HOH A 6 306 230 HOH HOH . X 6 HOH A 7 307 7 HOH HOH . X 6 HOH A 8 308 34 HOH HOH . X 6 HOH A 9 309 101 HOH HOH . X 6 HOH A 10 310 17 HOH HOH . X 6 HOH A 11 311 52 HOH HOH . X 6 HOH A 12 312 178 HOH HOH . X 6 HOH A 13 313 422 HOH HOH . X 6 HOH A 14 314 8 HOH HOH . X 6 HOH A 15 315 57 HOH HOH . X 6 HOH A 16 316 54 HOH HOH . X 6 HOH A 17 317 103 HOH HOH . X 6 HOH A 18 318 109 HOH HOH . X 6 HOH A 19 319 446 HOH HOH . X 6 HOH A 20 320 206 HOH HOH . X 6 HOH A 21 321 102 HOH HOH . X 6 HOH A 22 322 349 HOH HOH . X 6 HOH A 23 323 40 HOH HOH . X 6 HOH A 24 324 270 HOH HOH . X 6 HOH A 25 325 211 HOH HOH . X 6 HOH A 26 326 19 HOH HOH . X 6 HOH A 27 327 183 HOH HOH . X 6 HOH A 28 328 272 HOH HOH . X 6 HOH A 29 329 42 HOH HOH . X 6 HOH A 30 330 362 HOH HOH . X 6 HOH A 31 331 80 HOH HOH . X 6 HOH A 32 332 315 HOH HOH . X 6 HOH A 33 333 150 HOH HOH . X 6 HOH A 34 334 134 HOH HOH . X 6 HOH A 35 335 171 HOH HOH . X 6 HOH A 36 336 30 HOH HOH . X 6 HOH A 37 337 15 HOH HOH . X 6 HOH A 38 338 291 HOH HOH . X 6 HOH A 39 339 137 HOH HOH . X 6 HOH A 40 340 165 HOH HOH . X 6 HOH A 41 341 179 HOH HOH . X 6 HOH A 42 342 348 HOH HOH . X 6 HOH A 43 343 99 HOH HOH . X 6 HOH A 44 344 142 HOH HOH . X 6 HOH A 45 345 49 HOH HOH . X 6 HOH A 46 346 115 HOH HOH . X 6 HOH A 47 347 45 HOH HOH . X 6 HOH A 48 348 128 HOH HOH . X 6 HOH A 49 349 447 HOH HOH . X 6 HOH A 50 350 261 HOH HOH . X 6 HOH A 51 351 299 HOH HOH . X 6 HOH A 52 352 46 HOH HOH . X 6 HOH A 53 353 74 HOH HOH . X 6 HOH A 54 354 234 HOH HOH . X 6 HOH A 55 355 332 HOH HOH . X 6 HOH A 56 356 148 HOH HOH . X 6 HOH A 57 357 72 HOH HOH . X 6 HOH A 58 358 369 HOH HOH . X 6 HOH A 59 359 181 HOH HOH . X 6 HOH A 60 360 194 HOH HOH . X 6 HOH A 61 361 366 HOH HOH . X 6 HOH A 62 362 87 HOH HOH . X 6 HOH A 63 363 77 HOH HOH . X 6 HOH A 64 364 435 HOH HOH . X 6 HOH A 65 365 89 HOH HOH . X 6 HOH A 66 366 445 HOH HOH . X 6 HOH A 67 367 302 HOH HOH . X 6 HOH A 68 368 82 HOH HOH . X 6 HOH A 69 369 31 HOH HOH . X 6 HOH A 70 370 217 HOH HOH . X 6 HOH A 71 371 433 HOH HOH . X 6 HOH A 72 372 107 HOH HOH . X 6 HOH A 73 373 318 HOH HOH . X 6 HOH A 74 374 196 HOH HOH . X 6 HOH A 75 375 156 HOH HOH . X 6 HOH A 76 376 175 HOH HOH . X 6 HOH A 77 377 417 HOH HOH . X 6 HOH A 78 378 227 HOH HOH . X 6 HOH A 79 379 161 HOH HOH . X 6 HOH A 80 380 448 HOH HOH . X 6 HOH A 81 381 314 HOH HOH . X 6 HOH A 82 382 423 HOH HOH . X 6 HOH A 83 383 239 HOH HOH . X 6 HOH A 84 384 342 HOH HOH . X 6 HOH A 85 385 403 HOH HOH . X 6 HOH A 86 386 281 HOH HOH . X 6 HOH A 87 387 68 HOH HOH . X 6 HOH A 88 388 300 HOH HOH . X 6 HOH A 89 389 294 HOH HOH . X 6 HOH A 90 390 199 HOH HOH . X 6 HOH A 91 391 276 HOH HOH . X 6 HOH A 92 392 170 HOH HOH . X 6 HOH A 93 393 364 HOH HOH . X 6 HOH A 94 394 396 HOH HOH . Y 6 HOH B 1 601 295 HOH HOH . Y 6 HOH B 2 602 298 HOH HOH . Y 6 HOH B 3 603 258 HOH HOH . Y 6 HOH B 4 604 166 HOH HOH . Y 6 HOH B 5 605 70 HOH HOH . Y 6 HOH B 6 606 361 HOH HOH . Y 6 HOH B 7 607 173 HOH HOH . Y 6 HOH B 8 608 265 HOH HOH . Y 6 HOH B 9 609 21 HOH HOH . Y 6 HOH B 10 610 92 HOH HOH . Y 6 HOH B 11 611 50 HOH HOH . Y 6 HOH B 12 612 33 HOH HOH . Y 6 HOH B 13 613 5 HOH HOH . Y 6 HOH B 14 614 279 HOH HOH . Y 6 HOH B 15 615 243 HOH HOH . Y 6 HOH B 16 616 129 HOH HOH . Y 6 HOH B 17 617 390 HOH HOH . Y 6 HOH B 18 618 20 HOH HOH . Y 6 HOH B 19 619 164 HOH HOH . Y 6 HOH B 20 620 59 HOH HOH . Y 6 HOH B 21 621 259 HOH HOH . Y 6 HOH B 22 622 104 HOH HOH . Y 6 HOH B 23 623 41 HOH HOH . Y 6 HOH B 24 624 328 HOH HOH . Y 6 HOH B 25 625 37 HOH HOH . Y 6 HOH B 26 626 97 HOH HOH . Y 6 HOH B 27 627 147 HOH HOH . Y 6 HOH B 28 628 167 HOH HOH . Y 6 HOH B 29 629 106 HOH HOH . Y 6 HOH B 30 630 71 HOH HOH . Y 6 HOH B 31 631 44 HOH HOH . Y 6 HOH B 32 632 176 HOH HOH . Y 6 HOH B 33 633 434 HOH HOH . Y 6 HOH B 34 634 60 HOH HOH . Y 6 HOH B 35 635 12 HOH HOH . Y 6 HOH B 36 636 62 HOH HOH . Y 6 HOH B 37 637 63 HOH HOH . Y 6 HOH B 38 638 310 HOH HOH . Y 6 HOH B 39 639 14 HOH HOH . Y 6 HOH B 40 640 95 HOH HOH . Y 6 HOH B 41 641 264 HOH HOH . Y 6 HOH B 42 642 58 HOH HOH . Y 6 HOH B 43 643 6 HOH HOH . Y 6 HOH B 44 644 159 HOH HOH . Y 6 HOH B 45 645 262 HOH HOH . Y 6 HOH B 46 646 96 HOH HOH . Y 6 HOH B 47 647 307 HOH HOH . Y 6 HOH B 48 648 56 HOH HOH . Y 6 HOH B 49 649 53 HOH HOH . Y 6 HOH B 50 650 126 HOH HOH . Y 6 HOH B 51 651 35 HOH HOH . Y 6 HOH B 52 652 32 HOH HOH . Y 6 HOH B 53 653 116 HOH HOH . Y 6 HOH B 54 654 409 HOH HOH . Y 6 HOH B 55 655 117 HOH HOH . Y 6 HOH B 56 656 83 HOH HOH . Y 6 HOH B 57 657 29 HOH HOH . Y 6 HOH B 58 658 162 HOH HOH . Y 6 HOH B 59 659 10 HOH HOH . Y 6 HOH B 60 660 25 HOH HOH . Y 6 HOH B 61 661 18 HOH HOH . Y 6 HOH B 62 662 444 HOH HOH . Y 6 HOH B 63 663 13 HOH HOH . Y 6 HOH B 64 664 198 HOH HOH . Y 6 HOH B 65 665 201 HOH HOH . Y 6 HOH B 66 666 43 HOH HOH . Y 6 HOH B 67 667 76 HOH HOH . Y 6 HOH B 68 668 55 HOH HOH . Y 6 HOH B 69 669 61 HOH HOH . Y 6 HOH B 70 670 11 HOH HOH . Y 6 HOH B 71 671 168 HOH HOH . Y 6 HOH B 72 672 66 HOH HOH . Y 6 HOH B 73 673 39 HOH HOH . Y 6 HOH B 74 674 23 HOH HOH . Y 6 HOH B 75 675 132 HOH HOH . Y 6 HOH B 76 676 203 HOH HOH . Y 6 HOH B 77 677 347 HOH HOH . Y 6 HOH B 78 678 277 HOH HOH . Y 6 HOH B 79 679 219 HOH HOH . Y 6 HOH B 80 680 301 HOH HOH . Y 6 HOH B 81 681 73 HOH HOH . Y 6 HOH B 82 682 16 HOH HOH . Y 6 HOH B 83 683 48 HOH HOH . Y 6 HOH B 84 684 174 HOH HOH . Y 6 HOH B 85 685 187 HOH HOH . Y 6 HOH B 86 686 317 HOH HOH . Y 6 HOH B 87 687 100 HOH HOH . Y 6 HOH B 88 688 304 HOH HOH . Y 6 HOH B 89 689 373 HOH HOH . Y 6 HOH B 90 690 85 HOH HOH . Y 6 HOH B 91 691 2 HOH HOH . Y 6 HOH B 92 692 4 HOH HOH . Y 6 HOH B 93 693 288 HOH HOH . Y 6 HOH B 94 694 28 HOH HOH . Y 6 HOH B 95 695 3 HOH HOH . Y 6 HOH B 96 696 252 HOH HOH . Y 6 HOH B 97 697 47 HOH HOH . Y 6 HOH B 98 698 1 HOH HOH . Y 6 HOH B 99 699 24 HOH HOH . Y 6 HOH B 100 700 98 HOH HOH . Y 6 HOH B 101 701 69 HOH HOH . Y 6 HOH B 102 702 334 HOH HOH . Y 6 HOH B 103 703 293 HOH HOH . Y 6 HOH B 104 704 121 HOH HOH . Y 6 HOH B 105 705 122 HOH HOH . Y 6 HOH B 106 706 86 HOH HOH . Y 6 HOH B 107 707 36 HOH HOH . Y 6 HOH B 108 708 113 HOH HOH . Y 6 HOH B 109 709 232 HOH HOH . Y 6 HOH B 110 710 75 HOH HOH . Y 6 HOH B 111 711 91 HOH HOH . Y 6 HOH B 112 712 202 HOH HOH . Y 6 HOH B 113 713 343 HOH HOH . Y 6 HOH B 114 714 110 HOH HOH . Y 6 HOH B 115 715 64 HOH HOH . Y 6 HOH B 116 716 339 HOH HOH . Y 6 HOH B 117 717 79 HOH HOH . Y 6 HOH B 118 718 195 HOH HOH . Y 6 HOH B 119 719 81 HOH HOH . Y 6 HOH B 120 720 225 HOH HOH . Y 6 HOH B 121 721 200 HOH HOH . Y 6 HOH B 122 722 257 HOH HOH . Y 6 HOH B 123 723 337 HOH HOH . Y 6 HOH B 124 724 27 HOH HOH . Y 6 HOH B 125 725 131 HOH HOH . Y 6 HOH B 126 726 38 HOH HOH . Y 6 HOH B 127 727 94 HOH HOH . Y 6 HOH B 128 728 222 HOH HOH . Y 6 HOH B 129 729 223 HOH HOH . Y 6 HOH B 130 730 266 HOH HOH . Y 6 HOH B 131 731 233 HOH HOH . Y 6 HOH B 132 732 120 HOH HOH . Y 6 HOH B 133 733 154 HOH HOH . Y 6 HOH B 134 734 90 HOH HOH . Y 6 HOH B 135 735 127 HOH HOH . Y 6 HOH B 136 736 119 HOH HOH . Y 6 HOH B 137 737 208 HOH HOH . Y 6 HOH B 138 738 400 HOH HOH . Y 6 HOH B 139 739 108 HOH HOH . Y 6 HOH B 140 740 385 HOH HOH . Y 6 HOH B 141 741 376 HOH HOH . Y 6 HOH B 142 742 133 HOH HOH . Y 6 HOH B 143 743 283 HOH HOH . Y 6 HOH B 144 744 321 HOH HOH . Y 6 HOH B 145 745 226 HOH HOH . Y 6 HOH B 146 746 130 HOH HOH . Y 6 HOH B 147 747 67 HOH HOH . Y 6 HOH B 148 748 250 HOH HOH . Y 6 HOH B 149 749 271 HOH HOH . Y 6 HOH B 150 750 371 HOH HOH . Y 6 HOH B 151 751 51 HOH HOH . Y 6 HOH B 152 752 169 HOH HOH . Y 6 HOH B 153 753 327 HOH HOH . Y 6 HOH B 154 754 149 HOH HOH . Y 6 HOH B 155 755 354 HOH HOH . Y 6 HOH B 156 756 140 HOH HOH . Y 6 HOH B 157 757 244 HOH HOH . Y 6 HOH B 158 758 189 HOH HOH . Y 6 HOH B 159 759 346 HOH HOH . Y 6 HOH B 160 760 303 HOH HOH . Y 6 HOH B 161 761 247 HOH HOH . Y 6 HOH B 162 762 289 HOH HOH . Y 6 HOH B 163 763 406 HOH HOH . Y 6 HOH B 164 764 443 HOH HOH . Y 6 HOH B 165 765 344 HOH HOH . Y 6 HOH B 166 766 275 HOH HOH . Y 6 HOH B 167 767 436 HOH HOH . Y 6 HOH B 168 768 368 HOH HOH . Y 6 HOH B 169 769 212 HOH HOH . Y 6 HOH B 170 770 316 HOH HOH . Y 6 HOH B 171 771 370 HOH HOH . Y 6 HOH B 172 772 372 HOH HOH . Y 6 HOH B 173 773 158 HOH HOH . Y 6 HOH B 174 774 353 HOH HOH . Y 6 HOH B 175 775 309 HOH HOH . Y 6 HOH B 176 776 138 HOH HOH . Y 6 HOH B 177 777 229 HOH HOH . Y 6 HOH B 178 778 437 HOH HOH . Y 6 HOH B 179 779 415 HOH HOH . Y 6 HOH B 180 780 308 HOH HOH . Y 6 HOH B 181 781 410 HOH HOH . Y 6 HOH B 182 782 124 HOH HOH . Y 6 HOH B 183 783 345 HOH HOH . Y 6 HOH B 184 784 248 HOH HOH . Y 6 HOH B 185 785 351 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . N 4 9.01 -23.502 54.686 0.8 48.39 ? S DMS 502 B 1 HETATM 2 O O DMS . . . N 4 9.995 -24.533 54.229 0.8 47.67 ? O DMS 502 B 1 HETATM 3 C C1 DMS . . . N 4 8.695 -22.39 53.298 0.8 48.66 ? C1 DMS 502 B 1 HETATM 4 C C2 DMS . . . N 4 9.889 -22.283 55.724 0.8 48.88 ? C2 DMS 502 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #