data_7GAA # _model_server_result.job_id J4DiKKEWhrJnDrXM6JRqGw _model_server_result.datetime_utc '2024-11-01 15:30:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7gaa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7GAA # _exptl.entry_id 7GAA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 151.123 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4S)-imidazo[1,2-a]pyrimidine-5,7-diol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7GAA _cell.length_a 60.587 _cell.length_b 60.587 _cell.length_c 35.927 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7GAA _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H5 N3 O2' _chem_comp.formula_weight 151.123 _chem_comp.id K7L _chem_comp.mon_nstd_flag . _chem_comp.name (4S)-imidazo[1,2-a]pyrimidine-5,7-diol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 K7L sing 169 n n C1 C2 K7L sing 170 n y C2 C3 K7L doub 171 n y C3 O2 K7L sing 172 n n C3 N1 K7L sing 173 n y N1 C4 K7L sing 174 n y C4 C5 K7L doub 175 n y C5 N2 K7L sing 176 n y N2 C6 K7L doub 177 n y C6 N3 K7L sing 178 n y C1 N3 K7L doub 179 n y N1 C6 K7L sing 180 n y C4 H4 K7L sing 181 n n C5 H5 K7L sing 182 n n C2 H2 K7L sing 183 n n O1 H1 K7L sing 184 n n O2 H3 K7L sing 185 n n # _atom_sites.entry_id 7GAA _atom_sites.fract_transf_matrix[1][1] 0.016505 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016505 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.027834 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K7L A 1 201 201 K7L LIG . C 3 EDO A 1 202 105 EDO EDO . D 3 EDO A 1 203 106 EDO EDO . E 3 EDO A 1 204 107 EDO EDO . F 3 EDO A 1 205 108 EDO EDO . G 3 EDO A 1 206 109 EDO EDO . H 3 EDO A 1 207 110 EDO EDO . I 3 EDO A 1 208 111 EDO EDO . J 3 EDO A 1 209 112 EDO EDO . K 3 EDO A 1 210 113 EDO EDO . L 4 CL A 1 211 114 CL CL . M 5 HOH A 1 301 62 HOH HOH . M 5 HOH A 2 302 56 HOH HOH . M 5 HOH A 3 303 55 HOH HOH . M 5 HOH A 4 304 22 HOH HOH . M 5 HOH A 5 305 48 HOH HOH . M 5 HOH A 6 306 47 HOH HOH . M 5 HOH A 7 307 8 HOH HOH . M 5 HOH A 8 308 43 HOH HOH . M 5 HOH A 9 309 40 HOH HOH . M 5 HOH A 10 310 89 HOH HOH . M 5 HOH A 11 311 21 HOH HOH . M 5 HOH A 12 312 42 HOH HOH . M 5 HOH A 13 313 17 HOH HOH . M 5 HOH A 14 314 15 HOH HOH . M 5 HOH A 15 315 27 HOH HOH . M 5 HOH A 16 316 82 HOH HOH . M 5 HOH A 17 317 9 HOH HOH . M 5 HOH A 18 318 32 HOH HOH . M 5 HOH A 19 319 4 HOH HOH . M 5 HOH A 20 320 44 HOH HOH . M 5 HOH A 21 321 59 HOH HOH . M 5 HOH A 22 322 16 HOH HOH . M 5 HOH A 23 323 33 HOH HOH . M 5 HOH A 24 324 81 HOH HOH . M 5 HOH A 25 325 38 HOH HOH . M 5 HOH A 26 326 35 HOH HOH . M 5 HOH A 27 327 73 HOH HOH . M 5 HOH A 28 328 45 HOH HOH . M 5 HOH A 29 329 51 HOH HOH . M 5 HOH A 30 330 86 HOH HOH . M 5 HOH A 31 331 71 HOH HOH . M 5 HOH A 32 332 19 HOH HOH . M 5 HOH A 33 333 2 HOH HOH . M 5 HOH A 34 334 24 HOH HOH . M 5 HOH A 35 335 41 HOH HOH . M 5 HOH A 36 336 1 HOH HOH . M 5 HOH A 37 337 92 HOH HOH . M 5 HOH A 38 338 25 HOH HOH . M 5 HOH A 39 339 18 HOH HOH . M 5 HOH A 40 340 75 HOH HOH . M 5 HOH A 41 341 83 HOH HOH . M 5 HOH A 42 342 49 HOH HOH . M 5 HOH A 43 343 34 HOH HOH . M 5 HOH A 44 344 54 HOH HOH . M 5 HOH A 45 345 12 HOH HOH . M 5 HOH A 46 346 77 HOH HOH . M 5 HOH A 47 347 3 HOH HOH . M 5 HOH A 48 348 7 HOH HOH . M 5 HOH A 49 349 13 HOH HOH . M 5 HOH A 50 350 20 HOH HOH . M 5 HOH A 51 351 69 HOH HOH . M 5 HOH A 52 352 23 HOH HOH . M 5 HOH A 53 353 63 HOH HOH . M 5 HOH A 54 354 66 HOH HOH . M 5 HOH A 55 355 74 HOH HOH . M 5 HOH A 56 356 31 HOH HOH . M 5 HOH A 57 357 53 HOH HOH . M 5 HOH A 58 358 14 HOH HOH . M 5 HOH A 59 359 72 HOH HOH . M 5 HOH A 60 360 5 HOH HOH . M 5 HOH A 61 361 6 HOH HOH . M 5 HOH A 62 362 57 HOH HOH . M 5 HOH A 63 363 91 HOH HOH . M 5 HOH A 64 364 84 HOH HOH . M 5 HOH A 65 365 11 HOH HOH . M 5 HOH A 66 366 58 HOH HOH . M 5 HOH A 67 367 52 HOH HOH . M 5 HOH A 68 368 64 HOH HOH . M 5 HOH A 69 369 46 HOH HOH . M 5 HOH A 70 370 85 HOH HOH . M 5 HOH A 71 371 68 HOH HOH . M 5 HOH A 72 372 60 HOH HOH . M 5 HOH A 73 373 37 HOH HOH . M 5 HOH A 74 374 28 HOH HOH . M 5 HOH A 75 375 79 HOH HOH . M 5 HOH A 76 376 76 HOH HOH . M 5 HOH A 77 377 93 HOH HOH . M 5 HOH A 78 378 94 HOH HOH . M 5 HOH A 79 379 90 HOH HOH . M 5 HOH A 80 380 67 HOH HOH . M 5 HOH A 81 381 78 HOH HOH . M 5 HOH A 82 382 29 HOH HOH . M 5 HOH A 83 383 80 HOH HOH . M 5 HOH A 84 384 26 HOH HOH . M 5 HOH A 85 385 50 HOH HOH . M 5 HOH A 86 386 39 HOH HOH . M 5 HOH A 87 387 65 HOH HOH . M 5 HOH A 88 388 70 HOH HOH . M 5 HOH A 89 389 61 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 K7L . . . B 2 9.304 -22.343 12.84 0.74 94.4 ? N1 K7L 201 A 1 HETATM 2 N N3 K7L . . . B 2 10.463 -20.86 11.35 0.74 84.67 ? N3 K7L 201 A 1 HETATM 3 C C4 K7L . . . B 2 8.338 -23.32 12.702 0.74 90.59 ? C4 K7L 201 A 1 HETATM 4 C C5 K7L . . . B 2 8.052 -23.368 11.376 0.74 84.6 ? C5 K7L 201 A 1 HETATM 5 C C6 K7L . . . B 2 9.564 -21.837 11.558 0.74 91.78 ? C6 K7L 201 A 1 HETATM 6 C C1 K7L . . . B 2 11.113 -20.375 12.379 0.74 84 ? C1 K7L 201 A 1 HETATM 7 C C2 K7L . . . B 2 10.92 -20.823 13.69 0.74 90.67 ? C2 K7L 201 A 1 HETATM 8 C C3 K7L . . . B 2 9.99 -21.831 13.927 0.74 95.44 ? C3 K7L 201 A 1 HETATM 9 N N2 K7L . . . B 2 8.799 -22.459 10.666 0.74 90.67 ? N2 K7L 201 A 1 HETATM 10 O O1 K7L . . . B 2 12.014 -19.394 12.133 0.74 85.88 ? O1 K7L 201 A 1 HETATM 11 O O2 K7L . . . B 2 9.729 -22.325 15.171 0.74 98.57 ? O2 K7L 201 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 11 #