data_7GAC # _model_server_result.job_id 5DWb55A5Pwh0b0JkcN_2cQ _model_server_result.datetime_utc '2025-01-10 08:53:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7gac # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7GAC # _exptl.entry_id 7GAC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 204.268 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[(3S)-piperidin-3-yl]benzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7GAC _cell.length_a 60.616 _cell.length_b 60.616 _cell.length_c 35.849 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7GAC _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C12 H16 N2 O' _chem_comp.formula_weight 204.268 _chem_comp.id KF8 _chem_comp.mon_nstd_flag . _chem_comp.name N-[(3S)-piperidin-3-yl]benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C05 C06 KF8 sing 169 n n C05 C04 KF8 sing 170 n n C15 C14 KF8 doub 171 n y C15 C10 KF8 sing 172 n y C06 C07 KF8 sing 173 n n O01 C02 KF8 doub 174 n n C14 C13 KF8 sing 175 n y C02 N03 KF8 sing 176 n n C02 C10 KF8 sing 177 n n C07 N08 KF8 sing 178 n n N03 C04 KF8 sing 179 n n C10 C11 KF8 doub 180 n y C04 C09 KF8 sing 181 n n C09 N08 KF8 sing 182 n n C13 C12 KF8 doub 183 n y C11 C12 KF8 sing 184 n y C13 H1 KF8 sing 185 n n C15 H2 KF8 sing 186 n n N03 H3 KF8 sing 187 n n C04 H4 KF8 sing 188 n n C05 H5 KF8 sing 189 n n C05 H6 KF8 sing 190 n n C06 H7 KF8 sing 191 n n C06 H8 KF8 sing 192 n n C07 H9 KF8 sing 193 n n C07 H10 KF8 sing 194 n n N08 H11 KF8 sing 195 n n C09 H13 KF8 sing 196 n n C09 H14 KF8 sing 197 n n C11 H15 KF8 sing 198 n n C12 H16 KF8 sing 199 n n C14 H17 KF8 sing 200 n n # _atom_sites.entry_id 7GAC _atom_sites.fract_transf_matrix[1][1] 0.016497 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016497 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.027895 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 KF8 A 1 201 201 KF8 LIG . C 3 EDO A 1 202 105 EDO EDO . D 3 EDO A 1 203 106 EDO EDO . E 3 EDO A 1 204 107 EDO EDO . F 3 EDO A 1 205 108 EDO EDO . G 3 EDO A 1 206 109 EDO EDO . H 3 EDO A 1 207 110 EDO EDO . I 3 EDO A 1 208 111 EDO EDO . J 3 EDO A 1 209 112 EDO EDO . K 3 EDO A 1 210 113 EDO EDO . L 4 CL A 1 211 114 CL CL . M 5 HOH A 1 301 62 HOH HOH . M 5 HOH A 2 302 56 HOH HOH . M 5 HOH A 3 303 55 HOH HOH . M 5 HOH A 4 304 22 HOH HOH . M 5 HOH A 5 305 10 HOH HOH . M 5 HOH A 6 306 82 HOH HOH . M 5 HOH A 7 307 18 HOH HOH . M 5 HOH A 8 308 52 HOH HOH . M 5 HOH A 9 309 19 HOH HOH . M 5 HOH A 10 310 33 HOH HOH . M 5 HOH A 11 311 13 HOH HOH . M 5 HOH A 12 312 40 HOH HOH . M 5 HOH A 13 313 32 HOH HOH . M 5 HOH A 14 314 43 HOH HOH . M 5 HOH A 15 315 93 HOH HOH . M 5 HOH A 16 316 17 HOH HOH . M 5 HOH A 17 317 86 HOH HOH . M 5 HOH A 18 318 89 HOH HOH . M 5 HOH A 19 319 47 HOH HOH . M 5 HOH A 20 320 27 HOH HOH . M 5 HOH A 21 321 25 HOH HOH . M 5 HOH A 22 322 8 HOH HOH . M 5 HOH A 23 323 20 HOH HOH . M 5 HOH A 24 324 49 HOH HOH . M 5 HOH A 25 325 38 HOH HOH . M 5 HOH A 26 326 4 HOH HOH . M 5 HOH A 27 327 16 HOH HOH . M 5 HOH A 28 328 59 HOH HOH . M 5 HOH A 29 329 42 HOH HOH . M 5 HOH A 30 330 2 HOH HOH . M 5 HOH A 31 331 21 HOH HOH . M 5 HOH A 32 332 64 HOH HOH . M 5 HOH A 33 333 73 HOH HOH . M 5 HOH A 34 334 9 HOH HOH . M 5 HOH A 35 335 45 HOH HOH . M 5 HOH A 36 336 7 HOH HOH . M 5 HOH A 37 337 1 HOH HOH . M 5 HOH A 38 338 31 HOH HOH . M 5 HOH A 39 339 84 HOH HOH . M 5 HOH A 40 340 81 HOH HOH . M 5 HOH A 41 341 53 HOH HOH . M 5 HOH A 42 342 83 HOH HOH . M 5 HOH A 43 343 12 HOH HOH . M 5 HOH A 44 344 74 HOH HOH . M 5 HOH A 45 345 80 HOH HOH . M 5 HOH A 46 346 41 HOH HOH . M 5 HOH A 47 347 75 HOH HOH . M 5 HOH A 48 348 14 HOH HOH . M 5 HOH A 49 349 6 HOH HOH . M 5 HOH A 50 350 24 HOH HOH . M 5 HOH A 51 351 63 HOH HOH . M 5 HOH A 52 352 15 HOH HOH . M 5 HOH A 53 353 3 HOH HOH . M 5 HOH A 54 354 23 HOH HOH . M 5 HOH A 55 355 87 HOH HOH . M 5 HOH A 56 356 51 HOH HOH . M 5 HOH A 57 357 44 HOH HOH . M 5 HOH A 58 358 60 HOH HOH . M 5 HOH A 59 359 11 HOH HOH . M 5 HOH A 60 360 79 HOH HOH . M 5 HOH A 61 361 34 HOH HOH . M 5 HOH A 62 362 46 HOH HOH . M 5 HOH A 63 363 5 HOH HOH . M 5 HOH A 64 364 66 HOH HOH . M 5 HOH A 65 365 72 HOH HOH . M 5 HOH A 66 366 91 HOH HOH . M 5 HOH A 67 367 67 HOH HOH . M 5 HOH A 68 368 28 HOH HOH . M 5 HOH A 69 369 37 HOH HOH . M 5 HOH A 70 370 54 HOH HOH . M 5 HOH A 71 371 57 HOH HOH . M 5 HOH A 72 372 76 HOH HOH . M 5 HOH A 73 373 35 HOH HOH . M 5 HOH A 74 374 68 HOH HOH . M 5 HOH A 75 375 90 HOH HOH . M 5 HOH A 76 376 36 HOH HOH . M 5 HOH A 77 377 92 HOH HOH . M 5 HOH A 78 378 78 HOH HOH . M 5 HOH A 79 379 30 HOH HOH . M 5 HOH A 80 380 85 HOH HOH . M 5 HOH A 81 381 61 HOH HOH . M 5 HOH A 82 382 94 HOH HOH . M 5 HOH A 83 383 29 HOH HOH . M 5 HOH A 84 384 58 HOH HOH . M 5 HOH A 85 385 88 HOH HOH . M 5 HOH A 86 386 26 HOH HOH . M 5 HOH A 87 387 70 HOH HOH . M 5 HOH A 88 388 50 HOH HOH . M 5 HOH A 89 389 39 HOH HOH . M 5 HOH A 90 390 65 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 KF8 . . . B 2 18.872 -8.228 -0.52 1 90.75 ? C10 KF8 201 A 1 HETATM 2 C C13 KF8 . . . B 2 16.436 -7.054 0.124 1 83.52 ? C13 KF8 201 A 1 HETATM 3 C C15 KF8 . . . B 2 18.136 -7.551 -1.486 1 91.32 ? C15 KF8 201 A 1 HETATM 4 O O01 KF8 . . . B 2 20.241 -10.012 -1.271 1 97.54 ? O01 KF8 201 A 1 HETATM 5 C C02 KF8 . . . B 2 20.186 -8.851 -0.861 1 94.63 ? C02 KF8 201 A 1 HETATM 6 N N03 KF8 . . . B 2 21.28 -8.077 -0.676 1 92.49 ? N03 KF8 201 A 1 HETATM 7 C C04 KF8 . . . B 2 22.625 -8.601 -0.444 1 89.07 ? C04 KF8 201 A 1 HETATM 8 C C05 KF8 . . . B 2 23.222 -9.222 -1.702 1 91.84 ? C05 KF8 201 A 1 HETATM 9 C C06 KF8 . . . B 2 24.618 -9.768 -1.408 1 89.77 ? C06 KF8 201 A 1 HETATM 10 C C07 KF8 . . . B 2 25.497 -8.705 -0.778 1 86.21 ? C07 KF8 201 A 1 HETATM 11 N N08 KF8 . . . B 2 24.878 -8.116 0.416 1 83.86 ? N08 KF8 201 A 1 HETATM 12 C C09 KF8 . . . B 2 23.582 -7.518 0.077 1 88.35 ? C09 KF8 201 A 1 HETATM 13 C C11 KF8 . . . B 2 18.374 -8.308 0.775 1 87.44 ? C11 KF8 201 A 1 HETATM 14 C C12 KF8 . . . B 2 17.158 -7.722 1.089 1 86.56 ? C12 KF8 201 A 1 HETATM 15 C C14 KF8 . . . B 2 16.922 -6.968 -1.161 1 86.98 ? C14 KF8 201 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 15 #